SNX5 15804

Name: SNX5	Sequence: fasta or formatted (404aa)		NCBI GI: 23111047
Description: sorting nexin 5		Referenced in: ER, Golgi, and the Secretory Pathway Small RNAs in RNA Processing
Other entries for this name: alt mRNA [404aa] sorting nexin 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 26 2 C cysteine 1.2 5 2 D aspartate 6.9 28 2 E glutamate 9.9 40 2 F phenylalanine 5.4 22 2 G glycine 2.2 9 2 H histidine 2.7 11 1 I isoleucine 3.7 15 2 K lysine 10.6 43 2 L leucine 11.1 45 2 M methionine 2.0 8 1 N asparagine 4.0 16 2 P proline 3.0 12 2 Q glutamine 4.0 16 3 R arginine 5.2 21 2 S serine 6.9 28 2 T threonine 4.7 19 2 V valine 6.9 28 2 W tryptophan 0.2 1 1 Y tyrosine 2.7 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 5 SNX5 1.000 sorting nexin 5 SNX6 0.662 sorting nexin 6 isoform b SNX32 0.622 sorting nexin 6B SNX6 0.468 sorting nexin 6 isoform a SNX2 0.106 sorting nexin 2 SNX1 0.095 sorting nexin 1 isoform a SNX1 0.092 sorting nexin 1 isoform b SNX1 0.082 sorting nexin 1 isoform c SNX30 0.053 sorting nexin family member 30 SNX7 0.043 sorting nexin 7 isoform a SNX7 0.041 sorting nexin 7 isoform b SNX12 0.028 sorting nexin 12 SNX3 0.025 sorting nexin 3 isoform a GOLGA4 0.019 golgi autoantigen, golgin subfamily a, 4 DEK 0.018 DEK oncogene isoform 2 RB1CC1 0.017 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.017 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... MYH9 0.016 myosin, heavy polypeptide 9, non-muscle MNS1 0.016 meiosis-specific nuclear structural 1 SNX33 0.016 sorting nexin 33 AMPH 0.013 amphiphysin isoform 2 AMPH 0.013 amphiphysin isoform 1 SMC4 0.013 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.013 SMC4 structural maintenance of chromosomes 4-like 1 ... LOC100131673 0.013 PREDICTED: hypothetical protein LOC100131673 0.013 PREDICTED: hypothetical protein CCDC147 0.012 coiled-coil domain containing 147 C14orf145 0.012 hypothetical protein LOC145508 CCDC150 0.012 coiled-coil domain containing 150 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.