SNX1 15800

Name: SNX1	Sequence: fasta or formatted (522aa)		NCBI GI: 23111034
Description: sorting nexin 1 isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [457aa] sorting nexin 1 isoform b alt prot [474aa] sorting nexin 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 44 2 C cysteine 0.4 2 1 D aspartate 5.0 26 1 E glutamate 11.9 62 4 F phenylalanine 4.0 21 2 G glycine 4.6 24 4 H histidine 1.5 8 1 I isoleucine 3.8 20 1 K lysine 8.0 42 2 L leucine 10.5 55 2 M methionine 1.7 9 1 N asparagine 3.4 18 2 P proline 4.6 24 4 Q glutamine 6.5 34 3 R arginine 4.8 25 2 S serine 7.3 38 3 T threonine 5.4 28 2 V valine 5.0 26 2 W tryptophan 1.1 6 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 1 isoform a SNX1 0.874 sorting nexin 1 isoform c SNX1 0.765 sorting nexin 1 isoform b SNX2 0.567 sorting nexin 2 SNX7 0.076 sorting nexin 7 isoform a SNX5 0.073 sorting nexin 5 SNX5 0.073 sorting nexin 5 SNX7 0.070 sorting nexin 7 isoform b SNX32 0.067 sorting nexin 6B SNX30 0.060 sorting nexin family member 30 SNX6 0.059 sorting nexin 6 isoform b SNX12 0.051 sorting nexin 12 SNX3 0.047 sorting nexin 3 isoform a SNX11 0.040 sorting nexin 11 SNX11 0.040 sorting nexin 11 SNX6 0.029 sorting nexin 6 isoform a SNX33 0.029 sorting nexin 33 HS1BP3 0.028 HCLS1 binding protein 3 SNX19 0.028 sorting nexin 19 SNX16 0.027 sorting nexin 16 isoform a SNX16 0.027 sorting nexin 16 isoform a SNX10 0.025 sorting nexin 10 SNX18 0.025 sorting nexin 18 isoform c SNX18 0.025 sorting nexin 18 isoform a SNX18 0.025 sorting nexin 18 isoform b SNX8 0.023 sorting nexin 8 SGK3 0.023 serum/glucocorticoid regulated kinase 3 isoform 2 [H... SGK3 0.023 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SGK3 0.023 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SNX4 0.021 sorting nexin 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.