SNX6 36674

Name: SNX6	Sequence: fasta or formatted (418aa)		NCBI GI: 88703041
Description: sorting nexin 6 isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [290aa] sorting nexin 6 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 37 2 C cysteine 1.4 6 2 D aspartate 8.6 36 2 E glutamate 8.6 36 2 F phenylalanine 5.5 23 2 G glycine 3.8 16 1 H histidine 2.4 10 1 I isoleucine 3.1 13 2 K lysine 9.6 40 2 L leucine 11.0 46 2 M methionine 1.9 8 2 N asparagine 4.1 17 1 P proline 2.2 9 2 Q glutamine 3.8 16 2 R arginine 6.2 26 2 S serine 6.9 29 2 T threonine 3.1 13 1 V valine 6.0 25 2 W tryptophan 0.2 1 1 Y tyrosine 2.6 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 6 isoform b SNX6 0.679 sorting nexin 6 isoform a SNX32 0.662 sorting nexin 6B SNX5 0.639 sorting nexin 5 SNX5 0.639 sorting nexin 5 SNX2 0.076 sorting nexin 2 SNX1 0.074 sorting nexin 1 isoform a SNX1 0.074 sorting nexin 1 isoform b SNX1 0.058 sorting nexin 1 isoform c SNX7 0.035 sorting nexin 7 isoform a SNX7 0.031 sorting nexin 7 isoform b SNX30 0.024 sorting nexin family member 30 CENPE 0.024 centromere protein E AMPH 0.021 amphiphysin isoform 2 AMPH 0.021 amphiphysin isoform 1 SNX3 0.021 sorting nexin 3 isoform a SNX12 0.020 sorting nexin 12 MIA3 0.018 melanoma inhibitory activity family, member 3 [Homo... BIN1 0.016 bridging integrator 1 isoform 10 BIN1 0.016 bridging integrator 1 isoform 9 BIN1 0.016 bridging integrator 1 isoform 7 BIN1 0.016 bridging integrator 1 isoform 6 BIN1 0.016 bridging integrator 1 isoform 5 BIN1 0.016 bridging integrator 1 isoform 4 BIN1 0.016 bridging integrator 1 isoform 8 CDC42BPB 0.016 CDC42-binding protein kinase beta RAI14 0.015 retinoic acid induced 14 isoform d RAI14 0.015 retinoic acid induced 14 isoform c RAI14 0.015 retinoic acid induced 14 isoform b RAI14 0.015 retinoic acid induced 14 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.