SNX1 15801

Name: SNX1	Sequence: fasta or formatted (474aa)		NCBI GI: 23111036
Description: sorting nexin 1 isoform c		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [457aa] sorting nexin 1 isoform b alt prot [522aa] sorting nexin 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 36 2 C cysteine 0.4 2 1 D aspartate 4.6 22 1 E glutamate 12.2 58 4 F phenylalanine 4.2 20 2 G glycine 5.1 24 4 H histidine 1.7 8 1 I isoleucine 4.0 19 1 K lysine 7.6 36 2 L leucine 10.5 50 2 M methionine 1.7 8 1 N asparagine 3.6 17 2 P proline 4.9 23 4 Q glutamine 5.7 27 3 R arginine 4.4 21 2 S serine 8.0 38 3 T threonine 5.5 26 2 V valine 5.5 26 2 W tryptophan 0.6 3 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 1 isoform c SNX1 0.975 sorting nexin 1 isoform a SNX1 0.715 sorting nexin 1 isoform b SNX2 0.527 sorting nexin 2 SNX7 0.076 sorting nexin 7 isoform a SNX7 0.076 sorting nexin 7 isoform b SNX5 0.070 sorting nexin 5 SNX5 0.070 sorting nexin 5 SNX30 0.062 sorting nexin family member 30 SNX32 0.061 sorting nexin 6B SNX12 0.056 sorting nexin 12 SNX3 0.052 sorting nexin 3 isoform a SNX6 0.051 sorting nexin 6 isoform b SNX11 0.044 sorting nexin 11 SNX11 0.044 sorting nexin 11 SNX33 0.035 sorting nexin 33 HS1BP3 0.031 HCLS1 binding protein 3 SNX19 0.031 sorting nexin 19 SNX16 0.030 sorting nexin 16 isoform a SNX16 0.030 sorting nexin 16 isoform a SNX18 0.029 sorting nexin 18 isoform a SNX10 0.028 sorting nexin 10 SNX18 0.028 sorting nexin 18 isoform c SNX18 0.028 sorting nexin 18 isoform b SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 2 [H... SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SGK3 0.025 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SNX8 0.022 sorting nexin 8 SNX17 0.021 sorting nexin 17 SNX13 0.020 sorting nexin 13 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.