SNX6 36675

Name: SNX6	Sequence: fasta or formatted (290aa)		NCBI GI: 88703043
Description: sorting nexin 6 isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [418aa] sorting nexin 6 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 26 2 C cysteine 1.7 5 2 D aspartate 7.9 23 2 E glutamate 8.3 24 2 F phenylalanine 5.5 16 2 G glycine 2.4 7 1 H histidine 2.4 7 1 I isoleucine 2.8 8 1 K lysine 11.4 33 2 L leucine 12.1 35 2 M methionine 1.7 5 1 N asparagine 4.5 13 1 P proline 0.3 1 1 Q glutamine 3.8 11 2 R arginine 6.6 19 2 S serine 6.6 19 2 T threonine 3.8 11 1 V valine 6.2 18 1 W tryptophan 0.0 0 0 Y tyrosine 3.1 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 6 isoform a SNX6 1.000 sorting nexin 6 isoform b SNX32 0.687 sorting nexin 6B SNX5 0.665 sorting nexin 5 SNX5 0.665 sorting nexin 5 SNX1 0.053 sorting nexin 1 isoform b SNX1 0.053 sorting nexin 1 isoform a SNX2 0.046 sorting nexin 2 CENPE 0.035 centromere protein E AMPH 0.031 amphiphysin isoform 2 AMPH 0.031 amphiphysin isoform 1 SNX1 0.031 sorting nexin 1 isoform c MIA3 0.026 melanoma inhibitory activity family, member 3 [Homo... BIN1 0.024 bridging integrator 1 isoform 10 BIN1 0.024 bridging integrator 1 isoform 9 BIN1 0.024 bridging integrator 1 isoform 7 BIN1 0.024 bridging integrator 1 isoform 6 BIN1 0.024 bridging integrator 1 isoform 5 BIN1 0.024 bridging integrator 1 isoform 4 BIN1 0.024 bridging integrator 1 isoform 8 JAKMIP1 0.018 janus kinase and microtubule interacting protein 1 i... JAKMIP1 0.018 janus kinase and microtubule interacting protein 1 ... SNX7 0.018 sorting nexin 7 isoform a CEP290 0.017 centrosomal protein 290kDa MYO18B 0.017 myosin XVIIIB GFAP 0.015 glial fibrillary acidic protein isoform 2 RRBP1 0.015 ribosome binding protein 1 RRBP1 0.015 ribosome binding protein 1 LOC100289454 0.015 PREDICTED: hypothetical protein XP_002342954 SWAP70 0.015 SWAP-70 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.