BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|23110980 immunoglobulin lambda-like polypeptide 1 isoform b precursor [Homo sapiens] (84 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|23110980 immunoglobulin lambda-like polypeptide 1 isoform b p... 175 8e-45 gi|13399298 immunoglobulin lambda-like polypeptide 1 isoform a p... 144 1e-35 gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 33 0.037 gi|194272140 dendrin [Homo sapiens] 32 0.11 gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap... 32 0.14 gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 31 0.18 gi|38683860 insulin receptor substrate 2 [Homo sapiens] 31 0.24 gi|18959276 forkhead box D4-like 1 [Homo sapiens] 31 0.24 gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [... 30 0.41 gi|239757601 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54 gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo ... 30 0.54 gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo ... 30 0.54 gi|31442420 shroom family member 1 [Homo sapiens] 30 0.54 gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 29 0.70 gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 29 0.92 gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 29 0.92 gi|239757695 PREDICTED: hypothetical protein XP_002345523 [Homo ... 28 1.2 gi|239752180 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2 gi|239746703 PREDICTED: hypothetical protein XP_002343814 [Homo ... 28 1.2 gi|239750075 PREDICTED: hypothetical protein [Homo sapiens] 28 1.6 gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 28 1.6 gi|239744384 PREDICTED: hypothetical protein XP_002343133 [Homo ... 28 1.6 gi|157311635 FAM83H [Homo sapiens] 28 1.6 gi|239753506 PREDICTED: hypothetical protein [Homo sapiens] 28 2.0 gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo ... 28 2.0 gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo ... 28 2.0 gi|7661936 scaffold attachment factor B2 [Homo sapiens] 28 2.0 gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens] 28 2.0 gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 27 2.7 gi|239757289 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 >gi|23110980 immunoglobulin lambda-like polypeptide 1 isoform b precursor [Homo sapiens] Length = 84 Score = 175 bits (443), Expect = 8e-45 Identities = 84/84 (100%), Positives = 84/84 (100%) Query: 1 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR 60 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR Sbjct: 1 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR 60 Query: 61 SSLRSRWGRSAQGHPLGHSVPAVL 84 SSLRSRWGRSAQGHPLGHSVPAVL Sbjct: 61 SSLRSRWGRSAQGHPLGHSVPAVL 84 >gi|13399298 immunoglobulin lambda-like polypeptide 1 isoform a precursor [Homo sapiens] Length = 213 Score = 144 bits (364), Expect = 1e-35 Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR 60 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR Sbjct: 1 MRPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSR 60 Query: 61 SSLRSRWGR 69 SSLRSRWGR Sbjct: 61 SSLRSRWGR 69 >gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] Length = 202 Score = 33.5 bits (75), Expect = 0.037 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 14 GEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQG 73 G+P P LR W G G RP+ ++ AL G G + LR R GR+A G Sbjct: 129 GQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALAGG--GKRTAPGLRGRGGRAAAG 186 >gi|194272140 dendrin [Homo sapiens] Length = 711 Score = 32.0 bits (71), Expect = 0.11 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 2 RPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLL-RPT--AASQSRALGPGAPGGS 58 +PG G+GG G PG + + +LGL L PT + + +ALGP A G Sbjct: 522 QPGGGRGGEAEGGRPGDSTLEERTFRILGLPAPEVNLRDAPTQPGSPEHQALGPAASGAQ 581 Query: 59 SRS 61 R+ Sbjct: 582 GRA 584 >gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sapiens] Length = 501 Score = 31.6 bits (70), Expect = 0.14 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 7/47 (14%) Query: 31 LAVVTHGLLRPTAASQSRALGP------GAPGGSSRSSLRSRWGRSA 71 LA VT L+PTAA+++ LG G PGGS+ ++ + WG +A Sbjct: 256 LAGVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETT-EAEWGPAA 301 >gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] Length = 202 Score = 31.2 bits (69), Expect = 0.18 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 14 GEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQG 73 G+P P LR W G G RP+ ++ AL G G + R R GR+A G Sbjct: 129 GQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALAGG--GKRTAPGRRGRGGRAAAG 186 >gi|38683860 insulin receptor substrate 2 [Homo sapiens] Length = 1338 Score = 30.8 bits (68), Expect = 0.24 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 14 GEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRS 65 GEPG L P LL A + L +A+S + +LG G PG SS S RS Sbjct: 925 GEPGARLSPPAPPLLASAASSSSLL---SASSPASSLGSGTPGTSSDSRQRS 973 >gi|18959276 forkhead box D4-like 1 [Homo sapiens] Length = 408 Score = 30.8 bits (68), Expect = 0.24 Identities = 17/40 (42%), Positives = 21/40 (52%) Query: 38 LLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLG 77 L RP++ S + A A GG R LRS GR A P+G Sbjct: 355 LQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVG 394 >gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [Homo sapiens] Length = 342 Score = 30.0 bits (66), Expect = 0.41 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 9 GLEAPGE--PGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSS 59 G EA G PGP L R P+ + + T +RP + RALGP PGGSS Sbjct: 163 GAEAAGSGYPGP-LDLRRPMRTVPGPLFTD-FVRPLNINPDRALGPEYPGGSS 213 >gi|239757601 PREDICTED: hypothetical protein [Homo sapiens] Length = 308 Score = 29.6 bits (65), Expect = 0.54 Identities = 17/37 (45%), Positives = 17/37 (45%) Query: 4 GTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLR 40 GT GLE E GP W LLLLG H L R Sbjct: 171 GTRSEGLEERREAGPGQDSGWGLLLLGRLPRAHTLTR 207 >gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo sapiens] Length = 308 Score = 29.6 bits (65), Expect = 0.54 Identities = 17/37 (45%), Positives = 17/37 (45%) Query: 4 GTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLR 40 GT GLE E GP W LLLLG H L R Sbjct: 171 GTRSEGLEERREAGPGQDSGWGLLLLGRLPRAHTLTR 207 >gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo sapiens] Length = 452 Score = 29.6 bits (65), Expect = 0.54 Identities = 17/37 (45%), Positives = 17/37 (45%) Query: 4 GTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLR 40 GT GLE E GP W LLLLG H L R Sbjct: 171 GTRSEGLEERREAGPGQDSGWGLLLLGRLPRAHTLTR 207 >gi|31442420 shroom family member 1 [Homo sapiens] Length = 847 Score = 29.6 bits (65), Expect = 0.54 Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 5 TGQGGLEAPGEPGPNLRQRWPLL--LLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSS 62 +G E PG PGP RQ PLL L A + P + SRA G+ R Sbjct: 93 SGPQPTEVPGTPGPLNRQATPLLYALAAEAEAAAQAVEPPSPPASRAAYRQRLQGAQRRV 152 Query: 63 LRSRWGRSAQGHPLGHSVPAVL 84 LR S Q L S+PA L Sbjct: 153 LRE---TSFQRKELRMSLPARL 171 >gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] Length = 864 Score = 29.3 bits (64), Expect = 0.70 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 16 PGPNLRQRWPLLLLGLAVVTHGL---LRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQ 72 PGP RQR+ + G AV+ L LR S + P A GG +LR R S+ Sbjct: 104 PGPRARQRFHRMATGWAVLGSPLGHPLRGCPPSPAAWPAPPAVGGGCTVTLRIRPSESST 163 Query: 73 G 73 G Sbjct: 164 G 164 >gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo sapiens] Length = 398 Score = 28.9 bits (63), Expect = 0.92 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 13 PGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRAL--GPGAPGGSSRSSLRSRWGRS 70 P + P R R + LAV G PT +S GPGAPGG R+R R+ Sbjct: 32 PPDRSPTPRSRVSPGVTSLAV---GPGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRT 88 Query: 71 AQG 73 QG Sbjct: 89 RQG 91 >gi|29126247 basic helix-loop-helix family, member a15 [Homo sapiens] Length = 189 Score = 28.9 bits (63), Expect = 0.92 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 11/64 (17%) Query: 4 GTGQGGLEAPG-EPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSS 62 GT G L PG EP LR R R + R GP PGG SS Sbjct: 24 GTPDGSLPNPGPEPAKGLRSR----------PARAAARAPGEGRRRRPGPSGPGGRRDSS 73 Query: 63 LRSR 66 ++ R Sbjct: 74 IQRR 77 >gi|239757695 PREDICTED: hypothetical protein XP_002345523 [Homo sapiens] Length = 236 Score = 28.5 bits (62), Expect = 1.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query: 22 QRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRS----SLRSRWGRSAQGHPLG 77 + WP L +++V + P ++ A G GAPG S R+ +L SR G +A+ PLG Sbjct: 101 EAWPRPSL-ISMVNVVFILPPGSAVPTATGSGAPGSSERATGPPALFSR-GLAAKPRPLG 158 Query: 78 HS 79 S Sbjct: 159 PS 160 >gi|239752180 PREDICTED: hypothetical protein [Homo sapiens] Length = 236 Score = 28.5 bits (62), Expect = 1.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query: 22 QRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRS----SLRSRWGRSAQGHPLG 77 + WP L +++V + P ++ A G GAPG S R+ +L SR G +A+ PLG Sbjct: 101 EAWPRPSL-ISMVNVVFILPPGSAVPTATGSGAPGSSERATGPPALFSR-GLAAKPRPLG 158 Query: 78 HS 79 S Sbjct: 159 PS 160 >gi|239746703 PREDICTED: hypothetical protein XP_002343814 [Homo sapiens] Length = 236 Score = 28.5 bits (62), Expect = 1.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query: 22 QRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRS----SLRSRWGRSAQGHPLG 77 + WP L +++V + P ++ A G GAPG S R+ +L SR G +A+ PLG Sbjct: 101 EAWPRPSL-ISMVNVVFILPPGSAVPTATGSGAPGSSERATGPPALFSR-GLAAKPRPLG 158 Query: 78 HS 79 S Sbjct: 159 PS 160 >gi|239750075 PREDICTED: hypothetical protein [Homo sapiens] Length = 263 Score = 28.1 bits (61), Expect = 1.6 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 38 LLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLGHSVPA 82 LL P A+ S A+ GG R SL++ GRS+ G +VPA Sbjct: 202 LLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSIS--CGTNVPA 244 >gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo sapiens] Length = 894 Score = 28.1 bits (61), Expect = 1.6 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 16 PGPNLRQRWPLLLLGLAVVTHGLLRPTAA---SQSRALGPGAPGGSSRSSLRSRWGRSAQ 72 PGP RQR+ + G AV+ L P S + P A GG +LR R S+ Sbjct: 104 PGPRARQRFHRMATGWAVLGSPLGHPLQGCPPSPAAWPAPPAVGGGCTVTLRIRPSESST 163 Query: 73 G 73 G Sbjct: 164 G 164 >gi|239744384 PREDICTED: hypothetical protein XP_002343133 [Homo sapiens] Length = 263 Score = 28.1 bits (61), Expect = 1.6 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 38 LLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLGHSVPA 82 LL P A+ S A+ GG R SL++ GRS+ G +VPA Sbjct: 202 LLGPLEAAASHAVNSWVGGGGDRESLKTLSGRSSIS--CGTNVPA 244 >gi|157311635 FAM83H [Homo sapiens] Length = 1179 Score = 28.1 bits (61), Expect = 1.6 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 6 GQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRS 65 G GLE G P PNL QR+P A G P A ++ G P G R+ LR Sbjct: 530 GPRGLEPSGAPRPNLTQRFPC----QAAARPG---PDPAPEAEPERRGGPEG--RAGLR- 579 Query: 66 RW 67 RW Sbjct: 580 RW 581 >gi|239753506 PREDICTED: hypothetical protein [Homo sapiens] Length = 196 Score = 27.7 bits (60), Expect = 2.0 Identities = 18/53 (33%), Positives = 22/53 (41%) Query: 32 AVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLGHSVPAVL 84 AV GLL AS GPG+ G S R R R + +G P +L Sbjct: 54 AVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 106 >gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo sapiens] Length = 246 Score = 27.7 bits (60), Expect = 2.0 Identities = 18/53 (33%), Positives = 22/53 (41%) Query: 32 AVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLGHSVPAVL 84 AV GLL AS GPG+ G S R R R + +G P +L Sbjct: 104 AVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 156 >gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo sapiens] Length = 196 Score = 27.7 bits (60), Expect = 2.0 Identities = 18/53 (33%), Positives = 22/53 (41%) Query: 32 AVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSRWGRSAQGHPLGHSVPAVL 84 AV GLL AS GPG+ G S R R R + +G P +L Sbjct: 54 AVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 106 >gi|7661936 scaffold attachment factor B2 [Homo sapiens] Length = 953 Score = 27.7 bits (60), Expect = 2.0 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 51 GPGAPGG-SSRSSLRSRWGRSAQGHPLGHSVP 81 GP PG +SR + R G + GH GH VP Sbjct: 887 GPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918 >gi|5901884 cytochrome b-561 domain containing 2 [Homo sapiens] Length = 222 Score = 27.7 bits (60), Expect = 2.0 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 9 GLEAPGEPG---PNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALG 51 GL+ G G P L RWPL L L T GL+ S S LG Sbjct: 132 GLQCSGGVGLLYPKLLPRWPLAKLKLYHATSGLVGYLLGSASLLLG 177 >gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo sapiens] Length = 239 Score = 27.3 bits (59), Expect = 2.7 Identities = 29/81 (35%), Positives = 33/81 (40%), Gaps = 19/81 (23%) Query: 2 RPGTGQGGLEAPGEPGPNLRQRWPLLLLGLAVVTHGLLRPTAASQSRALG--PGAPGGSS 59 +P T G L G P LR W RP ASQ+R G P PG + Sbjct: 79 QPATRSGRLGVWGGP---LRHSWAP-------------RPRQASQTRGGGGGPSLPGPAG 122 Query: 60 RSSLRSRWGRSAQGH-PLGHS 79 R S RSR A+G P G S Sbjct: 123 RPSGRSRSRVGARGRLPSGGS 143 >gi|239757289 PREDICTED: hypothetical protein [Homo sapiens] Length = 545 Score = 27.3 bits (59), Expect = 2.7 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 14/53 (26%) Query: 15 EPGPNLRQ-RWPLLLLGLAVVTHGLLRPTAASQSRALGPGAPGGSSRSSLRSR 66 +PGP LRQ W L +P + Q A GPGA G RS ++ R Sbjct: 468 KPGPRLRQWLWKL-------------QPQSREQRGAGGPGAGVGGGRSDVQPR 507 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.136 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,632,434 Number of Sequences: 37866 Number of extensions: 234644 Number of successful extensions: 1022 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 985 Number of HSP's gapped (non-prelim): 87 length of query: 84 length of database: 18,247,518 effective HSP length: 56 effective length of query: 28 effective length of database: 16,127,022 effective search space: 451556616 effective search space used: 451556616 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.