Guide to the Human Genome
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Name: CYB561D2 Sequence: fasta or formatted (222aa) NCBI GI: 5901884
Description:

cytochrome b-561 domain containing 2

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         27           3
 C cysteine            2.3          5           1
 D aspartate           0.0          0           0
 E glutamate           2.3          5           1
 F phenylalanine       3.2          7           1
 G glycine             8.1         18           2
 H histidine           4.1          9           1
 I isoleucine          2.3          5           1
 K lysine              3.2          7           1
 L leucine            22.1         49           3
 M methionine          2.3          5           1
 N asparagine          0.9          2           1
 P proline             3.6          8           1
 Q glutamine           2.7          6           1
 R arginine            4.5         10           1
 S serine              9.5         21           2
 T threonine           4.1          9           1
 V valine              7.2         16           1
 W tryptophan          2.7          6           1
 Y tyrosine            3.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b-561 domain containing 2 
CYB561D1              0.458   cytochrome b-561 domain containing 1 isoform 2 [Homo...
CYB561D1              0.369   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.308   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYBRD1                0.053   cytochrome b reductase 1 isoform 1 
CYB561D1              0.046   cytochrome b-561 domain containing 1 isoform 5 [Hom...
CYB561D1              0.046   cytochrome b-561 domain containing 1 isoform 4 [Hom...
CYB561                0.041   cytochrome b-561 
CYB561                0.041   cytochrome b-561 
CYB561                0.041   cytochrome b-561 
CYBASC3               0.036   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYBASC3               0.036   cytochrome b, ascorbate dependent 3 isoform 1 [Homo...
CYBASC3               0.036   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
DUOXA1                0.017   Numb-interacting protein 
TPRA1                 0.012   G protein-coupled receptor 175 isoform 1 
TPRA1                 0.012   G protein-coupled receptor 175 isoform 1 
FAM69B                0.010   hypothetical protein LOC138311 
WDR8                  0.010   WD repeat domain 8 
LPHN3                 0.010   latrophilin 3 precursor 
SLC12A9               0.007   solute carrier family 12 (potassium/chloride transpo...
LPHN2                 0.007   latrophilin 2 precursor 
CYBRD1                0.007   cytochrome b reductase 1 isoform 2 
IGLL1                 0.007   immunoglobulin lambda-like polypeptide 1 isoform a p...
IGLL1                 0.007   immunoglobulin lambda-like polypeptide 1 isoform b p...
RGS9BP                0.007   RGS9 anchor protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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