HPS4 15781

Name: HPS4	Sequence: fasta or formatted (708aa)		NCBI GI: 23110966
Description: light ear protein isoform a		Referenced in: Lysosomes and Related Organelles
Other entries for this name: alt prot [703aa] light ear protein isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 62 2 C cysteine 2.5 18 2 D aspartate 4.7 33 1 E glutamate 7.2 51 2 F phenylalanine 3.0 21 2 G glycine 6.6 47 2 H histidine 3.2 23 2 I isoleucine 3.2 23 2 K lysine 3.7 26 1 L leucine 12.4 88 4 M methionine 1.4 10 1 N asparagine 3.0 21 1 P proline 7.8 55 2 Q glutamine 5.2 37 2 R arginine 4.2 30 2 S serine 9.6 68 3 T threonine 5.2 37 2 V valine 5.1 36 2 W tryptophan 0.8 6 2 Y tyrosine 2.3 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 light ear protein isoform a HPS4 0.982 light ear protein isoform b LOC728056 0.009 PREDICTED: similar to IQ motif and SEC7 domain-cont... LOC728056 0.009 PREDICTED: similar to IQ motif and SEC7 domain-cont... KIAA1530 0.009 hypothetical protein LOC57654 LOC100134209 0.009 PREDICTED: similar to IQ motif and SEC7 domain-cont... LOC731035 0.009 PREDICTED: hypothetical protein LOC100288881 0.009 PREDICTED: hypothetical protein XP_002343185 POU6F2 0.009 POU domain, class 6, transcription factor 2 LOC100290485 0.008 PREDICTED: hypothetical protein XP_002346633 SETD1B 0.008 SET domain containing 1B KCND3 0.007 potassium voltage-gated channel, Shal-related subfam... KCND3 0.007 potassium voltage-gated channel, Shal-related subfam... ARHGAP17 0.007 nadrin isoform 1 ARHGAP17 0.007 nadrin isoform 2 IGDCC4 0.007 immunoglobulin superfamily, DCC subclass, member 4 [... LOC100292378 0.006 PREDICTED: hypothetical protein GLIS3 0.006 GLIS family zinc finger 3 isoform a GLIS3 0.006 GLIS family zinc finger 3 isoform b NCOA6 0.006 nuclear receptor coactivator 6 MAST3 0.006 microtubule associated serine/threonine kinase 3 [H... EVX1 0.006 even-skipped homeobox 1 MUC16 0.006 mucin 16 DGKK 0.006 diacylglycerol kinase kappa GOLGA8B 0.006 golgi autoantigen, golgin subfamily a, 8B LOC729350 0.006 PREDICTED: hypothetical protein LOC729350 0.006 PREDICTED: hypothetical protein PRDM2 0.006 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.006 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.006 retinoblastoma protein-binding zinc finger protein i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.