Guide to the Human Genome
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Name: EVX1 Sequence: fasta or formatted (407aa) NCBI GI: 4503615
Description:

even-skipped homeobox 1

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         50           4
 C cysteine            2.5         10           1
 D aspartate           3.4         14           1
 E glutamate           6.1         25           3
 F phenylalanine       3.2         13           1
 G glycine            10.8         44           4
 H histidine           1.7          7           1
 I isoleucine          0.7          3           1
 K lysine              2.5         10           1
 L leucine             8.1         33           2
 M methionine          2.2          9           2
 N asparagine          2.0          8           1
 P proline            11.1         45           2
 Q glutamine           2.9         12           1
 R arginine            6.6         27           2
 S serine             11.3         46           3
 T threonine           4.4         18           2
 V valine              4.7         19           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   even-skipped homeobox 1 
EVX2                  0.390   even-skipped homeobox 2 
HOXB3                 0.095   homeobox B3 
NKX1-1                0.077   PREDICTED: HPX-153 homeobox 
NKX1-1                0.076   PREDICTED: NK1 homeobox 1 
ARX                   0.076   aristaless related homeobox 
GBX1                  0.076   gastrulation brain homeo box 1 
HOXB2                 0.074   homeobox B2 
VAX2                  0.072   ventral anterior homeobox 2 
HOXA3                 0.071   homeobox A3 isoform a 
HOXA3                 0.071   homeobox A3 isoform a 
HOXD3                 0.071   homeobox D3 
HMX1                  0.067   homeo box (H6 family) 1 
NKX3-2                0.067   NK3 homeobox 2 
HOXA2                 0.066   homeobox A2 
HOXA3                 0.066   homeobox A3 isoform b 
PDX1                  0.064   pancreatic and duodenal homeobox 1 
MEOX2                 0.064   mesenchyme homeobox 2 
NKX1-1                0.064   PREDICTED: NK1 homeobox 1 
GBX2                  0.064   gastrulation brain homeo box 2 
BARHL2                0.063   BarH-like homeobox 2 
HMX3                  0.063   H6 family homeobox 3 
BARHL1                0.063   BarH-like homeobox 1 
VAX1                  0.063   ventral anterior homeobox 1 isoform a 
HOXB1                 0.062   homeobox B1 
CDX1                  0.062   caudal type homeobox 1 
NKX2-4                0.061   NK2 homeobox 4 
HOXD4                 0.059   homeobox D4 
MNX1                  0.059   homeo box HB9 
HOXD11                0.059   homeobox D11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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