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Name: KCND3 Sequence: fasta or formatted (655aa) NCBI GI: 27436984
Description:

potassium voltage-gated channel, Shal-related subfamily, member 3 isoform 1

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [636aa] potassium voltage-gated channel, Shal-related subfamily, member 3...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         45           3
 C cysteine            2.4         16           2
 D aspartate           3.5         23           2
 E glutamate           6.0         39           3
 F phenylalanine       5.3         35           3
 G glycine             4.9         32           1
 H histidine           2.1         14           3
 I isoleucine          6.0         39           3
 K lysine              4.1         27           2
 L leucine             9.0         59           2
 M methionine          2.9         19           1
 N asparagine          4.3         28           2
 P proline             6.0         39           3
 Q glutamine           2.4         16           1
 R arginine            6.4         42           2
 S serine              9.5         62           2
 T threonine           7.9         52           3
 V valine              6.0         39           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, Shal-related subfam... 
KCND3                 0.964   potassium voltage-gated channel, Shal-related subfam...
KCND2                 0.722   potassium voltage-gated channel, Shal-related subfami...
KCND1                 0.602   potassium voltage-gated channel, Shal-related subfam...
KCNB2                 0.196   potassium voltage-gated channel, Shab-related subfam...
KCNB1                 0.189   potassium voltage-gated channel, Shab-related subfami...
KCNA7                 0.188   potassium voltage-gated channel, shaker-related subf...
KCNA2                 0.186   potassium voltage-gated channel, shaker-related subfa...
KCNA1                 0.186   potassium voltage-gated channel subfamily A member ...
KCNA3                 0.184   potassium voltage-gated channel, shaker-related subf...
KCNA10                0.181   potassium voltage-gated channel, shaker-related subfa...
KCNC1                 0.181   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.181   Shaw-related voltage-gated potassium channel protei...
KCNA4                 0.180   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.179   potassium voltage-gated channel, shaker-related subf...
KCNC4                 0.174   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.174   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.174   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.173   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.172   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.172   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.171   Shaw-related voltage-gated potassium channel protein...
KCNA6                 0.170   potassium voltage-gated channel, shaker-related subfa...
KCNS3                 0.163   potassium voltage-gated channel delayed-rectifier pr...
KCNF1                 0.159   potassium voltage-gated channel, subfamily F, member...
KCNV1                 0.155   potassium channel, subfamily V, member 1 
KCNS2                 0.154   potassium voltage-gated channel, delayed-rectifier, ...
KCNG1                 0.152   potassium voltage-gated channel, subfamily G, member...
KCNG2                 0.144   potassium voltage-gated channel, subfamily G, member ...
KCNG4                 0.141   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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