Guide to the Human Genome
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Name: KIAA1530 Sequence: fasta or formatted (709aa) NCBI GI: 190358543
Description:

hypothetical protein LOC57654

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         60           3
 C cysteine            2.0         14           2
 D aspartate           6.3         45           2
 E glutamate          11.1         79           3
 F phenylalanine       3.1         22           1
 G glycine             5.8         41           3
 H histidine           2.7         19           1
 I isoleucine          2.4         17           1
 K lysine              6.1         43           2
 L leucine             9.2         65           2
 M methionine          1.7         12           1
 N asparagine          2.1         15           1
 P proline             6.5         46           3
 Q glutamine           5.4         38           1
 R arginine            9.6         68           3
 S serine              6.2         44           2
 T threonine           3.8         27           2
 V valine              4.9         35           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57654 
LOC100290485          0.370   PREDICTED: hypothetical protein XP_002346633 
APP                   0.011   amyloid beta A4 protein isoform c precursor 
APP                   0.011   amyloid beta A4 protein isoform e precursor 
RP1L1                 0.011   retinitis pigmentosa 1-like 1 
RAI14                 0.010   retinoic acid induced 14 isoform d 
RAI14                 0.010   retinoic acid induced 14 isoform c 
RAI14                 0.010   retinoic acid induced 14 isoform b 
RAI14                 0.010   retinoic acid induced 14 isoform a 
RAI14                 0.010   retinoic acid induced 14 isoform a 
RAI14                 0.010   retinoic acid induced 14 isoform a 
DAB1                  0.010   disabled homolog 1 
HPS4                  0.009   light ear protein isoform a 
HPS4                  0.009   light ear protein isoform b 
LOC283767             0.009   golgi autoantigen, golgin subfamily a-like 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 2 
CLIP1                 0.009   restin isoform b 
CLIP1                 0.009   restin isoform a 
CTDP1                 0.008   CTD (carboxy-terminal domain, RNA polymerase II, pol...
CTDP1                 0.008   CTD (carboxy-terminal domain, RNA polymerase II, pol...
LOC283685             0.008   PREDICTED: golgi autoantigen, golgin subfamily a-li...
FTSJ3                 0.008   FtsJ homolog 3 
SYNC                  0.007   syncoilin, intermediate filament 1 isoform 2 
SYNC                  0.007   syncoilin, intermediate filament 1 isoform 1 
OS9                   0.007   osteosarcoma amplified 9 isoform 4 precursor 
UPF2                  0.007   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.007   UPF2 regulator of nonsense transcripts homolog [Homo...
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 1 
MAMSTR                0.007   MEF2 activating motif and SAP domain containing tra...
MAMSTR                0.007   MEF2 activating motif and SAP domain containing tran...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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