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Name: KCND3 Sequence: fasta or formatted (636aa) NCBI GI: 27436986
Description:

potassium voltage-gated channel, Shal-related subfamily, member 3 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [655aa] potassium voltage-gated channel, Shal-related subfamily, member 3...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         45           3
 C cysteine            2.5         16           2
 D aspartate           3.3         21           2
 E glutamate           6.1         39           3
 F phenylalanine       5.5         35           3
 G glycine             4.9         31           1
 H histidine           2.2         14           3
 I isoleucine          6.0         38           3
 K lysine              4.1         26           2
 L leucine             8.6         55           2
 M methionine          3.0         19           1
 N asparagine          4.4         28           2
 P proline             6.0         38           3
 Q glutamine           2.5         16           1
 R arginine            6.4         41           2
 S serine              9.3         59           2
 T threonine           7.9         50           3
 V valine              5.8         37           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.6         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, Shal-related subfam... 
KCND3                 0.990   potassium voltage-gated channel, Shal-related subfam...
KCND2                 0.751   potassium voltage-gated channel, Shal-related subfami...
KCND1                 0.628   potassium voltage-gated channel, Shal-related subfam...
KCNB2                 0.203   potassium voltage-gated channel, Shab-related subfam...
KCNB1                 0.196   potassium voltage-gated channel, Shab-related subfami...
KCNA7                 0.193   potassium voltage-gated channel, shaker-related subf...
KCNA2                 0.192   potassium voltage-gated channel, shaker-related subfa...
KCNA1                 0.191   potassium voltage-gated channel subfamily A member ...
KCNA3                 0.189   potassium voltage-gated channel, shaker-related subf...
KCNA10                0.186   potassium voltage-gated channel, shaker-related subfa...
KCNC1                 0.186   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.186   Shaw-related voltage-gated potassium channel protei...
KCNA4                 0.185   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.184   potassium voltage-gated channel, shaker-related subf...
KCNC4                 0.182   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.179   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.179   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.177   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.176   Shaw-related voltage-gated potassium channel protein...
KCNA6                 0.175   potassium voltage-gated channel, shaker-related subfa...
KCNC2                 0.175   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.175   Shaw-related voltage-gated potassium channel protein...
KCNS3                 0.168   potassium voltage-gated channel delayed-rectifier pr...
KCNF1                 0.164   potassium voltage-gated channel, subfamily F, member...
KCNV1                 0.160   potassium channel, subfamily V, member 1 
KCNS2                 0.158   potassium voltage-gated channel, delayed-rectifier, ...
KCNG1                 0.157   potassium voltage-gated channel, subfamily G, member...
KCNG2                 0.148   potassium voltage-gated channel, subfamily G, member ...
KCNG4                 0.145   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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