Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 22748969
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo
sapiens]
(570 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo sap... 1133 0.0
gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo sap... 159 7e-39
gi|156151413 MUS81 endonuclease homolog [Homo sapiens] 50 7e-06
gi|157739945 tetratricopeptide repeat, ankyrin repeat and coiled... 38 0.022
gi|217330641 IWS1 homolog [Homo sapiens] 38 0.029
gi|21735548 centrosomal protein 2 [Homo sapiens] 34 0.32
gi|110349719 titin isoform N2-A [Homo sapiens] 34 0.41
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 34 0.41
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 34 0.41
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 34 0.41
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 34 0.41
gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens] 33 0.54
gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens] 33 0.54
gi|90652863 testis development protein NYD-SP26 [Homo sapiens] 33 0.54
gi|58218975 hypothetical protein LOC399814 [Homo sapiens] 33 0.54
gi|55956910 meningioma 1 [Homo sapiens] 33 0.70
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.2
gi|39930602 TATA box binding protein like 2 [Homo sapiens] 32 1.2
gi|46358366 zinc finger protein 746 [Homo sapiens] 32 1.2
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 31 2.7
gi|55749715 hypothetical protein LOC57536 [Homo sapiens] 31 2.7
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 31 2.7
gi|30039714 otopetrin 2 [Homo sapiens] 31 3.5
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 30 6.0
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 30 6.0
gi|148612857 sickle tail isoform 3 [Homo sapiens] 30 6.0
gi|148612813 sickle tail isoform 2 [Homo sapiens] 30 6.0
gi|45237195 Janus kinase and microtubule interacting protein 2 [... 30 6.0
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 30 6.0
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 30 6.0
>gi|22748969 essential meiotic endonuclease 1 homolog 1 [Homo
sapiens]
Length = 570
Score = 1133 bits (2930), Expect = 0.0
Identities = 570/570 (100%), Positives = 570/570 (100%)
Query: 1 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 60
MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP
Sbjct: 1 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 60
Query: 61 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 120
ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK
Sbjct: 61 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 120
Query: 121 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 180
SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS
Sbjct: 121 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 180
Query: 181 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCQQQRQARQKESTLRRQERKNAALVTRM 240
SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCQQQRQARQKESTLRRQERKNAALVTRM
Sbjct: 181 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCQQQRQARQKESTLRRQERKNAALVTRM 240
Query: 241 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 300
KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS
Sbjct: 241 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 300
Query: 301 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 360
EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS
Sbjct: 301 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 360
Query: 361 LVIVDQEKCFSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVDAEEALVDLQLHTE 420
LVIVDQEKCFSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVDAEEALVDLQLHTE
Sbjct: 361 LVIVDQEKCFSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVDAEEALVDLQLHTE 420
Query: 421 AQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLAL 480
AQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLAL
Sbjct: 421 AQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLAL 480
Query: 481 VWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTS 540
VWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTS
Sbjct: 481 VWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTS 540
Query: 541 TSRRIGPELSRRIYLQMTTLQPHLSLDSAD 570
TSRRIGPELSRRIYLQMTTLQPHLSLDSAD
Sbjct: 541 TSRRIGPELSRRIYLQMTTLQPHLSLDSAD 570
>gi|58197552 essential meiotic endonuclease 1 homolog 2 [Homo
sapiens]
Length = 444
Score = 159 bits (402), Expect = 7e-39
Identities = 131/398 (32%), Positives = 185/398 (46%), Gaps = 72/398 (18%)
Query: 230 ERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPC 289
ER+ AA R+ RPE+ LK + V +D +L+ G L+ AL+ + C C IE Q
Sbjct: 56 ERRAAAEALRLL--RPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIEPQRPAR 113
Query: 290 SVTWRRRAGPSEDR----EDWVE-EPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQ 344
S+ W R + R E W E +L+LL E F+ + Q + G
Sbjct: 114 SLRWTRASPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQ------ISGPTHWV 167
Query: 345 GFVTDITAKTAGKALSLVIVDQEKCFSAQNPPRRGKQGA--------------------- 383
+++ T TA L+++ +D + + + P++G G
Sbjct: 168 PWISPET--TARPHLAVIGLDAYLWYRSLSCPQQGWLGRGFRGGGLWQRPSSGRAGPMGS 225
Query: 384 ---------NKQTKKQQQRQPE----ASIGSMVSRVDAEE-------ALVDLQLHTEAQA 423
++Q + +QPE A VS + EE ALV LQL
Sbjct: 226 GEEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEVRACLSWALVLLQLWANLDV 285
Query: 424 QIVQSWKELADFTCAFTKAVAEAPFK--------------KLRDETTFSFCLESDWAGGV 469
+V SW+EL+ CA TKA+A+ P K + R+ FSFC WA G
Sbjct: 286 LLVASWQELSRHVCAVTKALAQYPLKCVMPRLKGGRITSRQYRESQAFSFCTAGRWAAGE 345
Query: 470 KVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLAD 529
V G GL WRRQI+Q +RVS +A AVV A+PSP+LL QA + C +++ER LLAD
Sbjct: 346 PVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTAFPSPRLLQQALEACSTERERMGLLAD 405
Query: 530 IQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLD 567
+ V EG RR+GP+LSRRI L +TT P L LD
Sbjct: 406 LPVPPSEG--GRPRRVGPDLSRRICLFLTTANPDLLLD 441
>gi|156151413 MUS81 endonuclease homolog [Homo sapiens]
Length = 551
Score = 49.7 bits (117), Expect = 7e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 481 VWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTS 540
V+ RQ+ Q+ VS E A+A+V+ Y +P L+ AY C + KE++ LL+ I+ R
Sbjct: 474 VFARQLMQVRGVSGEKAAALVDRYSTPASLLAAYDACATPKEQETLLSTIKCGR------ 527
Query: 541 TSRRIGPELSRRI 553
R +GP LSR +
Sbjct: 528 LQRNLGPALSRTL 540
>gi|157739945 tetratricopeptide repeat, ankyrin repeat and
coiled-coil containing 2 [Homo sapiens]
Length = 1990
Score = 38.1 bits (87), Expect = 0.022
Identities = 42/138 (30%), Positives = 55/138 (39%), Gaps = 32/138 (23%)
Query: 5 KSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDC----EASCPPAP 60
KSS S D SEE P + SS RQ + + + SDC + + PP P
Sbjct: 14 KSSRKNRSSDGGSEEPPD-----RRQSSVDSRQSRSGQGGISTE-SDCAFEPDYAVPPLP 67
Query: 61 --------ELFSPPVPD-------------IAETVTQTQPVRLLSSESEDEEEFIPLAQR 99
EL PP D + E VT+ QP S E +DE + + QR
Sbjct: 68 VSEGDAEQELGPPPSVDEAANTLMTRLGFLLGEKVTEVQPGDQYSMEVQDENQTSAITQR 127
Query: 100 LT-CKFLTHKQLSPEDSS 116
++ C LT SP SS
Sbjct: 128 ISPCSTLTSSTASPPASS 145
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 37.7 bits (86), Expect = 0.029
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 21/138 (15%)
Query: 8 PSLDSGDSDSEELPTFAFLKKEPSSTKRRQ--PEREEKIVVVDISDCEASCPPAPELFSP 65
P DS+SEELP E R Q E++ ISD E+ PP +
Sbjct: 204 PKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDS 263
Query: 66 -----PVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 120
P P I+++ ++ P R +S+SE+EE L ++S +S P K
Sbjct: 264 ENEELPKPRISDSESE-DPPRNQASDSENEE-------------LPKPRVSDSESEGPQK 309
Query: 121 SVLDHQNNEGASCDWKKP 138
E AS +KP
Sbjct: 310 GPASDSETEDASRHKQKP 327
Score = 35.0 bits (79), Expect = 0.19
Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 13/151 (8%)
Query: 10 LDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSPPVPD 69
L DS++EEL E + E + ++ AS + P + D
Sbjct: 128 LPGSDSENEELLNGHASDSENEDVGKHPASDSE---IEELQKSPASDSETEDALKPQISD 184
Query: 70 IAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVKSVLDHQNNE 129
+P R +S+SE+EE P + L Q+S +S P + NE
Sbjct: 185 SESE----EPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENE 240
Query: 130 GASCDWKKPFPKIPEVPLHDTPERSAADNKD 160
+ P P+I + D P A+D+++
Sbjct: 241 ------ELPKPRISDSESEDPPRHQASDSEN 265
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 34.3 bits (77), Expect = 0.32
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 366 QEKCFSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVDAEEALVDLQLHTEAQ--- 422
Q++ A R K + K+QQ R AE AL +QL TE +
Sbjct: 870 QQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVS 929
Query: 423 --AQIVQSWKELADFTCAFTKAVAEAPFKKLRDETT 456
++Q+ KELAD + + + +KL+++ T
Sbjct: 930 LLETLLQTQKELADASQQLERLRQDMKVQKLKEQET 965
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.9 bits (76), Expect = 0.41
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 4/153 (2%)
Query: 8 PSLDSGDSDSEELPTFAFLKKEPSSTK----RRQPEREEKIVVVDISDCEASCPPAPELF 63
P L + E P K EP + K ++P EEK V A+ P PE+
Sbjct: 9289 PELPEKPAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVP 9348
Query: 64 SPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVKSVL 123
PVP+ V + ++ + ++ + +++T + P P K V
Sbjct: 9349 KKPVPEEKIPVPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVP 9408
Query: 124 DHQNNEGASCDWKKPFPKIPEVPLHDTPERSAA 156
+ + + P PK+P +P PE A
Sbjct: 9409 EERKPVPRKEEEVPPPPKVPALPKKPVPEEKVA 9441
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 33.9 bits (76), Expect = 0.41
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 4 KKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVD----ISDCEASCPPA 59
K+ +P+ + + T KEP+ T ++P +E + C+ P
Sbjct: 560 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 619
Query: 60 PELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV 119
P+ +P P T +P + P T K K+L+P + P
Sbjct: 620 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT--TPKKPAPKELAPTTTKGPT 677
Query: 120 KSVLDHQN----NEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLST 175
+ D E A K+P P P+ P TPE ++ + P +
Sbjct: 678 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 737
Query: 176 CPGQSS 181
P +S+
Sbjct: 738 SPDEST 743
Score = 31.2 bits (69), Expect = 2.7
Identities = 46/211 (21%), Positives = 70/211 (33%), Gaps = 21/211 (9%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSP 65
++P + + E PT KEP+ T ++P K + P AP+ +P
Sbjct: 304 TTPKKPAPTTPKEPAPT---TPKEPTPTTPKEPAPTTKEPAPTTP--KEPAPTAPKKPAP 358
Query: 66 PVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSP-----------ED 114
P T +P + E P T K+ +P E
Sbjct: 359 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 418
Query: 115 SSSPVKSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLS 174
S + K E A KKP P P+ P TP+ A + PA
Sbjct: 419 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--P 476
Query: 175 TCPGQSSSLA---VTKTNSDILPPQKKTKPS 202
T P +++ +T T + L P KP+
Sbjct: 477 TTPKETAPTTPKKLTPTTPEKLAPTTPEKPA 507
Score = 29.6 bits (65), Expect = 7.8
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 23/166 (13%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPE----REEKIVVVDISDCEASCPPAPE 61
++P S + E PT KEP+ T ++P +E + PAP
Sbjct: 413 TTPKEPSPTTTKEPAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 469
Query: 62 LFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV-- 119
P P + T P +L + E P T T ++L+P P
Sbjct: 470 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT----TPEELAPTTPEEPTPT 525
Query: 120 ----------KSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSA 155
K+ + E A K+P P P+ P TP+ +A
Sbjct: 526 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 571
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 33.9 bits (76), Expect = 0.41
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 4 KKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVD----ISDCEASCPPA 59
K+ +P+ + + T KEP+ T ++P +E + C+ P
Sbjct: 601 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 660
Query: 60 PELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV 119
P+ +P P T +P + P T K K+L+P + P
Sbjct: 661 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT--TPKKPAPKELAPTTTKGPT 718
Query: 120 KSVLDHQN----NEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLST 175
+ D E A K+P P P+ P TPE ++ + P +
Sbjct: 719 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 778
Query: 176 CPGQSS 181
P +S+
Sbjct: 779 SPDEST 784
Score = 31.2 bits (69), Expect = 2.7
Identities = 46/211 (21%), Positives = 70/211 (33%), Gaps = 21/211 (9%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSP 65
++P + + E PT KEP+ T ++P K + P AP+ +P
Sbjct: 345 TTPKKPAPTTPKEPAPT---TPKEPTPTTPKEPAPTTKEPAPTTP--KEPAPTAPKKPAP 399
Query: 66 PVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSP-----------ED 114
P T +P + E P T K+ +P E
Sbjct: 400 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Query: 115 SSSPVKSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLS 174
S + K E A KKP P P+ P TP+ A + PA
Sbjct: 460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--P 517
Query: 175 TCPGQSSSLA---VTKTNSDILPPQKKTKPS 202
T P +++ +T T + L P KP+
Sbjct: 518 TTPKETAPTTPKKLTPTTPEKLAPTTPEKPA 548
Score = 29.6 bits (65), Expect = 7.8
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 23/166 (13%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPE----REEKIVVVDISDCEASCPPAPE 61
++P S + E PT KEP+ T ++P +E + PAP
Sbjct: 454 TTPKEPSPTTTKEPAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 510
Query: 62 LFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV-- 119
P P + T P +L + E P T T ++L+P P
Sbjct: 511 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT----TPEELAPTTPEEPTPT 566
Query: 120 ----------KSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSA 155
K+ + E A K+P P P+ P TP+ +A
Sbjct: 567 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 612
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 33.9 bits (76), Expect = 0.41
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 4 KKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVD----ISDCEASCPPA 59
K+ +P+ + + T KEP+ T ++P +E + C+ P
Sbjct: 653 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 712
Query: 60 PELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV 119
P+ +P P T +P + P T K K+L+P + P
Sbjct: 713 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT--TPKKPAPKELAPTTTKGPT 770
Query: 120 KSVLDHQN----NEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLST 175
+ D E A K+P P P+ P TPE ++ + P +
Sbjct: 771 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 830
Query: 176 CPGQSS 181
P +S+
Sbjct: 831 SPDEST 836
Score = 31.2 bits (69), Expect = 2.7
Identities = 46/211 (21%), Positives = 70/211 (33%), Gaps = 21/211 (9%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSP 65
++P + + E PT KEP+ T ++P K + P AP+ +P
Sbjct: 397 TTPKKPAPTTPKEPAPT---TPKEPTPTTPKEPAPTTKEPAPTTP--KEPAPTAPKKPAP 451
Query: 66 PVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSP-----------ED 114
P T +P + E P T K+ +P E
Sbjct: 452 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Query: 115 SSSPVKSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLS 174
S + K E A KKP P P+ P TP+ A + PA
Sbjct: 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--P 569
Query: 175 TCPGQSSSLA---VTKTNSDILPPQKKTKPS 202
T P +++ +T T + L P KP+
Sbjct: 570 TTPKETAPTTPKKLTPTTPEKLAPTTPEKPA 600
Score = 29.6 bits (65), Expect = 7.8
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 23/166 (13%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPE----REEKIVVVDISDCEASCPPAPE 61
++P S + E PT KEP+ T ++P +E + PAP
Sbjct: 506 TTPKEPSPTTTKEPAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 562
Query: 62 LFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV-- 119
P P + T P +L + E P T T ++L+P P
Sbjct: 563 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT----TPEELAPTTPEEPTPT 618
Query: 120 ----------KSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSA 155
K+ + E A K+P P P+ P TP+ +A
Sbjct: 619 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 664
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 33.9 bits (76), Expect = 0.41
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 10/186 (5%)
Query: 4 KKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVD----ISDCEASCPPA 59
K+ +P+ + + T KEP+ T ++P +E + C+ P
Sbjct: 694 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT 753
Query: 60 PELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV 119
P+ +P P T +P + P T K K+L+P + P
Sbjct: 754 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT--TPKKPAPKELAPTTTKGPT 811
Query: 120 KSVLDHQN----NEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLST 175
+ D E A K+P P P+ P TPE ++ + P +
Sbjct: 812 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHK 871
Query: 176 CPGQSS 181
P +S+
Sbjct: 872 SPDEST 877
Score = 31.2 bits (69), Expect = 2.7
Identities = 46/211 (21%), Positives = 70/211 (33%), Gaps = 21/211 (9%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSP 65
++P + + E PT KEP+ T ++P K + P AP+ +P
Sbjct: 438 TTPKKPAPTTPKEPAPT---TPKEPTPTTPKEPAPTTKEPAPTTP--KEPAPTAPKKPAP 492
Query: 66 PVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSP-----------ED 114
P T +P + E P T K+ +P E
Sbjct: 493 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Query: 115 SSSPVKSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLS 174
S + K E A KKP P P+ P TP+ A + PA
Sbjct: 553 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--P 610
Query: 175 TCPGQSSSLA---VTKTNSDILPPQKKTKPS 202
T P +++ +T T + L P KP+
Sbjct: 611 TTPKETAPTTPKKLTPTTPEKLAPTTPEKPA 641
Score = 29.6 bits (65), Expect = 7.8
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 23/166 (13%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPE----REEKIVVVDISDCEASCPPAPE 61
++P S + E PT KEP+ T ++P +E + PAP
Sbjct: 547 TTPKEPSPTTTKEPAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 603
Query: 62 LFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPV-- 119
P P + T P +L + E P T T ++L+P P
Sbjct: 604 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT----TPEELAPTTPEEPTPT 659
Query: 120 ----------KSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSA 155
K+ + E A K+P P P+ P TP+ +A
Sbjct: 660 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 705
>gi|194306543 oxidation resistance 1 isoform 2 [Homo sapiens]
Length = 839
Score = 33.5 bits (75), Expect = 0.54
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 71 AETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLT 106
+ T T +P R++SS SE+EE F ++ CK++T
Sbjct: 180 SSTFTGIRPARVVSSTSEEEEAFTEKFLKINCKYIT 215
>gi|194306541 oxidation resistance 1 isoform 1 [Homo sapiens]
Length = 846
Score = 33.5 bits (75), Expect = 0.54
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 71 AETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLT 106
+ T T +P R++SS SE+EE F ++ CK++T
Sbjct: 187 SSTFTGIRPARVVSSTSEEEEAFTEKFLKINCKYIT 222
>gi|90652863 testis development protein NYD-SP26 [Homo sapiens]
Length = 395
Score = 33.5 bits (75), Expect = 0.54
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 7 SPSLDSGDSDSEELPTFAFLKKEP------SSTKRRQPEREEKIVVVDISDCEASCPPAP 60
S +L + + P F K E SS K P +E + V D + EA PPAP
Sbjct: 163 SGTLKDSSAGVADAPAFPRKKDEADMSNYNSSIKSNVPA-DEAVQVTDSTIPEAEIPPAP 221
Query: 61 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 120
E +PDI + + + + S ED+ + KF+T +L+ K
Sbjct: 222 EESFTTIPDIT-ALEEEKITEIDLSVLEDDTSAVATLTDSDEKFITVFELTTSAEKDKDK 280
Query: 121 S----VLDHQNNEGAS 132
+ D + EGAS
Sbjct: 281 REDTLLTDEETTEGAS 296
>gi|58218975 hypothetical protein LOC399814 [Homo sapiens]
Length = 335
Score = 33.5 bits (75), Expect = 0.54
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 193 LPPQKKTKPSQKVQGRGSHGCQQQRQARQKESTLRRQERKNAALVTRMKAQRPEECLKH 251
L P K K +K +H C Q +++E+ + +R+ + K++ P++CL +
Sbjct: 200 LGPMAKNKARRKEDNYDTHNCDDANQDKKEEAEGKNTKRREIKMNVVFKSKEPKKCLTY 258
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 33.1 bits (74), Expect = 0.70
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 194 PPQKKTKPS----QKVQGRGSHGCQQQRQARQKESTLRRQERKNAALVTRMKAQRPEE 247
PP + P Q+ Q + QQQ+Q +Q++ ++Q+R+NAAL+ + A R ++
Sbjct: 510 PPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQ 567
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 1.2
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 32/185 (17%)
Query: 85 SESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVKSVLDHQNNEGASCDWKKPFPKIPE 144
S SEDE F + Q SP +SSS +++ +S +P +
Sbjct: 359 SNSEDEASFKSESA----------QSSPSNSSS---------SSDSSSDSDFEPSQNHSQ 399
Query: 145 VPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQSSSLAVTKTNSDIL----------- 193
PL E ++ D D A T PG+ S L+ + + SD
Sbjct: 400 GPLRSMVEDLQSEESDED-DSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSSLPSREPP 458
Query: 194 PPQKKTKPSQKVQGRGS-HGCQQQRQARQKESTLRRQERKNAALVTRMKAQRPEECLKHI 252
PPQK P+ KV GR S C + + +K + + + L R+ A R L+ I
Sbjct: 459 PPQKPPPPNSKVSGRRSPESCSKPEKILKKGTYDKAYTDELVELHRRLMALRERNVLQQI 518
Query: 253 IVVLD 257
+ +++
Sbjct: 519 VNLIE 523
>gi|39930602 TATA box binding protein like 2 [Homo sapiens]
Length = 375
Score = 32.3 bits (72), Expect = 1.2
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 30 PSSTKRRQPEREEKIVVVDISDCEAS---CPPAPELFSPPVPDIAETVTQTQPVRLLSSE 86
P + R E+EE + + + C A PP LFSP VP + + P +S
Sbjct: 25 PPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSN 84
Query: 87 SEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVKSVLD-HQNNEGASCDWKKPFPKIPEV 145
E +E + + FL +++ E+ PV S + +N+E S + P P +V
Sbjct: 85 PEVKETSGDFSS-VDLSFLP-DEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDV 142
Query: 146 PL 147
L
Sbjct: 143 GL 144
>gi|46358366 zinc finger protein 746 [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 1.2
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 133 CDWKKPFPKIPEVPLHDTP 151
C+W++P PKIP+VP+ +P
Sbjct: 155 CNWRRPGPKIPDVPVDPSP 173
>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
Length = 1439
Score = 31.2 bits (69), Expect = 2.7
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 171 AYLSTCPGQSSSLAVTKTNSDILPPQ----KKTKPSQKV-----QGRGSHGCQQQRQARQ 221
+Y S+ P SS+ T T+S + PPQ +++ PS + Q + S +++R+ ++
Sbjct: 407 SYHSSRPSSGSSVPTTPTSS-VSPPQEARLERSSPSGLLTSSFRQHQESLAAERERRRQE 465
Query: 222 KESTLRRQERKNAALVTRMKAQRPEE 247
+E L+R ER+ +R + EE
Sbjct: 466 REERLQRIEREERNKFSRDYLDKREE 491
>gi|55749715 hypothetical protein LOC57536 [Homo sapiens]
Length = 577
Score = 31.2 bits (69), Expect = 2.7
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 120 KSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQ 179
K LD +E +C+ + P K P VP P+ ++L + C L S C G
Sbjct: 256 KDDLDKIPSETTTCNCESPGRK-PAVPTEKMPQ------EELHMKECPHLKPTPSQCCGH 308
Query: 180 SSSLAVTKTN----SDILPPQKKTKPSQKVQGRGS-----HGCQQQRQARQKESTLRRQ- 229
LA + + +++ P KT P R S HG A Q TL++Q
Sbjct: 309 R--LAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHG----GGALQPIETLKKQI 362
Query: 230 --ERKNAALVTRMKAQRPEECLKHIIVVLDPVLL 261
+RK ++ +M+ + +E L+H++ + LL
Sbjct: 363 SEDRKQQLMLQKMELEIEKERLQHLLAQQETKLL 396
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 31.2 bits (69), Expect = 2.7
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 128 NEGASCDWKKPFPKIPEVPLHDTPERSAADNK-DLILDPCCQLPAYLSTCPGQSSSLAVT 186
N AS D F + + P + PE+ NK + P PA S Q
Sbjct: 415 NHKASSDSAASFEVVRQCPTAEKPEQEHTPNKMPSLKSPLLPCPATKSLSQKQDPKNISK 474
Query: 187 KTNSDILPPQKKTKPSQKVQGRGSHG 212
T ++ P + + PS K +HG
Sbjct: 475 NTKTNFFSPGEHSNPSNKPTVEDNHG 500
>gi|30039714 otopetrin 2 [Homo sapiens]
Length = 562
Score = 30.8 bits (68), Expect = 3.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 29 EPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSPPVPDIAETV 74
EP ST ++P ++ +D ++CPP P L SP D E V
Sbjct: 433 EPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAV 478
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 30.0 bits (66), Expect = 6.0
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 6 SSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSP 65
SS S + +S+ E+L ++ +K P S+K +E + + D E PP+ + SP
Sbjct: 770 SSESEMTSESEEEQLEPASWSRKTPPSSKSAPATKE-----ISLLDLEDFTPPSVQPVSP 824
Query: 66 P 66
P
Sbjct: 825 P 825
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 30.0 bits (66), Expect = 6.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 364 VDQEKCFSAQNPPRRGKQGANKQTKKQQQRQPEAS 398
V +E + PP++GK+ K TKK +++ P+A+
Sbjct: 105 VPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKAT 139
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 30.0 bits (66), Expect = 6.0
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 12/168 (7%)
Query: 40 REEKIVVVDISDCEASCPPAPELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQR 99
R+E I S+ +A P P + A T + P + +S S+DEEE +
Sbjct: 1040 RKENITAKASSE-DAGPSPQTRATKYPAEEPASAWTPSPPP-VTTSSSKDEEEEEEEGDK 1097
Query: 100 LTCKFLTHKQLSPEDSSSPVKSVLDHQNNEGASCDWKKPFPKIPEV----PLHDTPERSA 155
+ + L +P+ S PV N + D K+ + + + ++S
Sbjct: 1098 IMAE-LQGSSGAPQTSRMPVPM---SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG 1153
Query: 156 ADNKDLILD-PCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPS 202
D K P ++PA LS G+SSSL + +S LP TKPS
Sbjct: 1154 GDFKPTSPSLPASKIPA-LSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1200
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 30.0 bits (66), Expect = 6.0
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 12/168 (7%)
Query: 40 REEKIVVVDISDCEASCPPAPELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQR 99
R+E I S+ +A P P + A T + P + +S S+DEEE +
Sbjct: 995 RKENITAKASSE-DAGPSPQTRATKYPAEEPASAWTPSPPP-VTTSSSKDEEEEEEEGDK 1052
Query: 100 LTCKFLTHKQLSPEDSSSPVKSVLDHQNNEGASCDWKKPFPKIPEV----PLHDTPERSA 155
+ + L +P+ S PV N + D K+ + + + ++S
Sbjct: 1053 IMAE-LQGSSGAPQTSRMPVPM---SAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSG 1108
Query: 156 ADNKDLILD-PCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPS 202
D K P ++PA LS G+SSSL + +S LP TKPS
Sbjct: 1109 GDFKPTSPSLPASKIPA-LSPSSGKSSSLPSSSGDSSNLPNPPATKPS 1155
>gi|45237195 Janus kinase and microtubule interacting protein 2
[Homo sapiens]
Length = 810
Score = 30.0 bits (66), Expect = 6.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 216 QRQARQKESTLRR-QERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQME 264
+R+ Q+ +R ++RK+ LVT +KA+ EE +K + V + ++ Q E
Sbjct: 48 EREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHE 97
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 30.0 bits (66), Expect = 6.0
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 22/156 (14%)
Query: 114 DSSSPVKSVLDHQNNEGASCDWKKPFPKIPEV-PLHDTPERSAADNKDLILDPCCQLPAY 172
DS+ P +V D + AS + P IP + P + PE + K + P L Y
Sbjct: 959 DSAGPRLNVCDKSS---ASIGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEY 1015
Query: 173 LSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCQQQR-QARQKESTLRRQER 231
T+ I P+KK K Q+ + S C+++ AR + S +Q
Sbjct: 1016 -------------TEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARGRSSAQNKQVD 1062
Query: 232 KNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGG 267
+N+ + T K + P L+ L+ L Q E GG
Sbjct: 1063 ENSLIST--KEEPP--VLEREAPFLEGPLAQSELGG 1094
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 30.0 bits (66), Expect = 6.0
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 22/156 (14%)
Query: 114 DSSSPVKSVLDHQNNEGASCDWKKPFPKIPEV-PLHDTPERSAADNKDLILDPCCQLPAY 172
DS+ P +V D + AS + P IP + P + PE + K + P L Y
Sbjct: 1228 DSAGPRLNVCDKSS---ASIGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEY 1284
Query: 173 LSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCQQQR-QARQKESTLRRQER 231
T+ I P+KK K Q+ + S C+++ AR + S +Q
Sbjct: 1285 -------------TEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARGRSSAQNKQVD 1331
Query: 232 KNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGG 267
+N+ + T K + P L+ L+ L Q E GG
Sbjct: 1332 ENSLIST--KEEPP--VLEREAPFLEGPLAQSELGG 1363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,889,401
Number of Sequences: 37866
Number of extensions: 1076087
Number of successful extensions: 3754
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 3691
Number of HSP's gapped (non-prelim): 97
length of query: 570
length of database: 18,247,518
effective HSP length: 108
effective length of query: 462
effective length of database: 14,157,990
effective search space: 6540991380
effective search space used: 6540991380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.