Guide to the Human Genome
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Name: KIAA1328 Sequence: fasta or formatted (577aa) NCBI GI: 55749715
Description:

hypothetical protein LOC57536

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         31           3
 C cysteine            2.6         15           2
 D aspartate           4.7         27           2
 E glutamate           9.0         52           2
 F phenylalanine       1.6          9           2
 G glycine             4.0         23           3
 H histidine           3.3         19           2
 I isoleucine          3.1         18           2
 K lysine              8.3         48           2
 L leucine            10.2         59           3
 M methionine          2.4         14           1
 N asparagine          2.6         15           2
 P proline             5.7         33           2
 Q glutamine           7.3         42           3
 R arginine            6.2         36           2
 S serine             11.1         64           3
 T threonine           5.9         34           3
 V valine              3.8         22           2
 W tryptophan          0.9          5           1
 Y tyrosine            1.9         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57536 
MYH3                  0.026   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CDC42BPB              0.021   CDC42-binding protein kinase beta 
CHCHD3                0.020   coiled-coil-helix-coiled-coil-helix domain containing...
CENPF                 0.020   centromere protein F 
MYH8                  0.020   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH7                  0.019   myosin, heavy chain 7, cardiac muscle, beta 
MYH13                 0.019   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH15                 0.019   myosin, heavy polypeptide 15 
MYH1                  0.019   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC11                0.019   coiled-coil domain containing 11 
MYH4                  0.019   myosin, heavy polypeptide 4, skeletal muscle 
GCC2                  0.019   GRIP and coiled-coil domain-containing 2 
MYH6                  0.019   myosin heavy chain 6 
MYO5A                 0.019   myosin VA isoform 2 
MYO5A                 0.019   myosin VA isoform 1 
CROCC                 0.019   ciliary rootlet coiled-coil 
MYH9                  0.018   myosin, heavy polypeptide 9, non-muscle 
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
PMFBP1                0.018   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.018   polyamine modulated factor 1 binding protein 1 isof...
DBN1                  0.018   drebrin 1 isoform b 
DBN1                  0.018   drebrin 1 isoform a 
CLIP1                 0.017   restin isoform b 
EEA1                  0.017   early endosome antigen 1, 162kD 
GOLGA1                0.017   golgin 97 
HOOK3                 0.017   golgi-associated microtubule-binding protein HOOK3 [...
ANKRD18A              0.017   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.017   PREDICTED: ankyrin repeat domain 18A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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