CLDND2 15515

Name: CLDND2	Sequence: fasta or formatted (167aa)		NCBI GI: 22748765
Description: claudin domain containing 2		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 12 1 C cysteine 4.2 7 1 D aspartate 1.8 3 1 E glutamate 2.4 4 1 F phenylalanine 5.4 9 2 G glycine 10.8 18 2 H histidine 1.2 2 1 I isoleucine 4.8 8 1 K lysine 1.8 3 1 L leucine 14.4 24 4 M methionine 4.2 7 1 N asparagine 3.6 6 2 P proline 1.8 3 1 Q glutamine 4.2 7 2 R arginine 3.0 5 1 S serine 9.0 15 2 T threonine 6.6 11 2 V valine 9.0 15 2 W tryptophan 3.0 5 1 Y tyrosine 1.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin domain containing 2 LIM2 0.095 lens intrinsic membrane protein 2, 19kDa isoform 2 ... PMP22 0.076 peripheral myelin protein 22 PMP22 0.076 peripheral myelin protein 22 PMP22 0.076 peripheral myelin protein 22 CLDN24 0.076 PREDICTED: claudin-24-like CLDN24 0.070 PREDICTED: claudin-24-like CLDN24 0.070 PREDICTED: claudin-24-like EMP1 0.057 epithelial membrane protein 1 LIM2 0.054 lens intrinsic membrane protein 2, 19kDa isoform 1 [... CLDN1 0.051 claudin 1 TMEM225 0.038 transmembrane protein 225 CLDN11 0.038 claudin 11 PTGFR 0.032 prostaglandin F receptor isoform b precursor PTGFR 0.032 prostaglandin F receptor isoform a precursor TMEM47 0.032 transmembrane protein 47 NKG7 0.029 natural killer cell group 7 sequence LOC644672 0.025 claudin-like EMP2 0.019 epithelial membrane protein 2 LOC100131199 0.019 PREDICTED: hypothetical protein LOC100131199 0.019 PREDICTED: hypothetical protein LOC100131199 0.019 PREDICTED: hypothetical protein CLDN23 0.016 claudin 23 CLDN15 0.016 claudin 15 LOC644070 0.013 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.013 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.013 PREDICTED: germ cell-specific gene 1-like protein 2... TMEM202 0.013 transmembrane protein 202 LAMA3 0.013 laminin alpha 3 subunit isoform 1 LAMA3 0.013 laminin alpha 3 subunit isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.