TMEM47 3577

Name: TMEM47	Sequence: fasta or formatted (181aa)		NCBI GI: 13899273
Description: transmembrane protein 47		Referenced in: Integrins p53 Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 18 2 C cysteine 3.9 7 1 D aspartate 2.8 5 1 E glutamate 3.9 7 2 F phenylalanine 4.4 8 1 G glycine 7.2 13 2 H histidine 1.7 3 1 I isoleucine 7.2 13 2 K lysine 2.8 5 1 L leucine 15.5 28 3 M methionine 1.7 3 1 N asparagine 1.7 3 1 P proline 3.3 6 1 Q glutamine 1.7 3 1 R arginine 3.3 6 3 S serine 8.3 15 2 T threonine 3.3 6 1 V valine 8.8 16 2 W tryptophan 3.3 6 1 Y tyrosine 5.5 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 47 PERP 0.188 PERP, TP53 apoptosis effector PMP22 0.041 peripheral myelin protein 22 PMP22 0.041 peripheral myelin protein 22 PMP22 0.041 peripheral myelin protein 22 CLDN17 0.041 claudin 17 EMP3 0.038 epithelial membrane protein 3 LIM2 0.029 lens intrinsic membrane protein 2, 19kDa isoform 2 ... LOC644070 0.029 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.029 PREDICTED: germ cell-specific gene 1-like protein 2... LOC644070 0.029 PREDICTED: germ cell-specific gene 1-like protein 2... CLDND2 0.029 claudin domain containing 2 LIM2 0.020 lens intrinsic membrane protein 2, 19kDa isoform 1 [... LOC100131199 0.017 PREDICTED: hypothetical protein LOC100131199 0.017 PREDICTED: hypothetical protein LOC100131199 0.017 PREDICTED: hypothetical protein CLDN1 0.017 claudin 1 CLDN23 0.017 claudin 23 LPAR2 0.012 lysophosphatidic acid receptor 2 CLDN2 0.012 claudin 2 LHFP 0.009 lipoma HMGIC fusion partner KDM6A 0.009 ubiquitously transcribed tetratricopeptide repeat, ... TRPM6 0.006 transient receptor potential cation channel, subfami... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.