EMP1 28611

Name: EMP1	Sequence: fasta or formatted (157aa)		NCBI GI: 4503559
Description: epithelial membrane protein 1		Referenced in: Oligodendrocytes and Myelin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 10 1 C cysteine 4.5 7 1 D aspartate 2.5 4 1 E glutamate 1.3 2 1 F phenylalanine 7.6 12 2 G glycine 5.7 9 1 H histidine 2.5 4 2 I isoleucine 9.6 15 2 K lysine 3.2 5 2 L leucine 12.7 20 2 M methionine 2.5 4 1 N asparagine 3.8 6 1 P proline 0.0 0 0 Q glutamine 1.9 3 1 R arginine 1.9 3 1 S serine 8.9 14 1 T threonine 6.4 10 2 V valine 11.5 18 2 W tryptophan 2.5 4 1 Y tyrosine 4.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 epithelial membrane protein 1 PMP22 0.347 peripheral myelin protein 22 PMP22 0.347 peripheral myelin protein 22 PMP22 0.347 peripheral myelin protein 22 EMP2 0.327 epithelial membrane protein 2 EMP3 0.235 epithelial membrane protein 3 LOC391359 0.150 PREDICTED: similar to hCG1784039 LIM2 0.105 lens intrinsic membrane protein 2, 19kDa isoform 2 ... CLDN18 0.082 claudin 18 isoform 2 CLDN18 0.075 claudin 18 isoform 1 LIM2 0.065 lens intrinsic membrane protein 2, 19kDa isoform 1 [... CLDND2 0.061 claudin domain containing 2 LOC391359 0.051 PREDICTED: similar to hCG1784039 LOC391359 0.051 PREDICTED: hypothetical protein LOC391359 CLDN10 0.037 claudin 10 isoform b TMEM202 0.037 transmembrane protein 202 ATP2B4 0.034 plasma membrane calcium ATPase 4 isoform 4a ATP2B4 0.034 plasma membrane calcium ATPase 4 isoform 4b CACNG8 0.034 voltage-dependent calcium channel gamma-8 subunit [H... CLDN19 0.027 claudin 19 isoform a CLDN23 0.027 claudin 23 CLDN11 0.027 claudin 11 CLDN19 0.027 claudin 19 isoform b CACNG2 0.027 voltage-dependent calcium channel gamma-2 subunit [Ho... CACNG3 0.027 voltage-dependent calcium channel gamma-3 subunit [Ho... CLDN6 0.024 claudin 6 CLDN10 0.024 claudin 10 isoform a CLDN10 0.024 claudin 10 isoform a_i1 TMEM114 0.020 PREDICTED: transmembrane protein 114 TMEM114 0.020 PREDICTED: transmembrane protein 114, partial [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.