Guide to the Human Genome
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Name: TELO2 Sequence: fasta or formatted (837aa) NCBI GI: 225545550
Description:

TEL2, telomere maintenance 2, homolog

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         87           2
 C cysteine            1.6         13           1
 D aspartate           4.4         37           2
 E glutamate           7.8         65           2
 F phenylalanine       3.2         27           3
 G glycine             6.1         51           2
 H histidine           1.8         15           1
 I isoleucine          1.7         14           1
 K lysine              2.6         22           2
 L leucine            16.5        138           4
 M methionine          2.2         18           2
 N asparagine          1.2         10           1
 P proline             6.7         56           2
 Q glutamine           4.9         41           2
 R arginine            7.5         63           2
 S serine              7.4         62           3
 T threonine           3.7         31           2
 V valine              8.1         68           3
 W tryptophan          1.0          8           1
 Y tyrosine            1.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TEL2, telomere maintenance 2, homolog 
NUP205                0.006   nucleoporin 205kDa 
NAP1L3                0.006   nucleosome assembly protein 1-like 3 
PAX2                  0.005   paired box protein 2 isoform d 
PAX2                  0.005   paired box protein 2 isoform b 
PAX2                  0.005   paired box protein 2 isoform c 
SP140                 0.005   SP140 nuclear body protein isoform 1 
WDR62                 0.005   WD repeat domain 62 isoform 1 
WDR62                 0.005   WD repeat domain 62 isoform 2 
KNDC1                 0.005   kinase non-catalytic C-lobe domain (KIND) containin...
RREB1                 0.005   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.005   ras responsive element binding protein 1 isoform 1 [...
INTS3                 0.005   integrator complex subunit 3 
PKD1                  0.004   polycystin 1 isoform 2 precursor 
PKD1                  0.004   polycystin 1 isoform 1 precursor 
LOC100291076          0.004   PREDICTED: hypothetical protein XP_002347846 
LOC100287104          0.004   PREDICTED: hypothetical protein XP_002343630 
TTC26                 0.004   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.004   tetratricopeptide repeat domain 26 isoform 3 
TTC26                 0.004   tetratricopeptide repeat domain 26 isoform 2 
CUX2                  0.004   cut-like 2 
MCM10                 0.004   minichromosome maintenance complex component 10 isof...
ADAMTS8               0.004   ADAM metallopeptidase with thrombospondin type 1 mo...
LOC100290783          0.004   PREDICTED: hypothetical protein XP_002347614 
LOC100288864          0.004   PREDICTED: hypothetical protein XP_002343435 
C1orf9                0.004   chromosome 1 open reading frame 9 protein isoform 2...
CAST                  0.004   calpastatin isoform l 
CAST                  0.004   calpastatin isoform k 
CAST                  0.004   calpastatin isoform j 
CAST                  0.004   calpastatin isoform i 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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