Guide to the Human Genome
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Name: ADAMTS8 Sequence: fasta or formatted (889aa) NCBI GI: 153792351
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 8 preproprotein

Referenced in:

Lung
Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         71           3
 C cysteine            4.5         40           1
 D aspartate           5.1         45           2
 E glutamate           6.6         59           3
 F phenylalanine       3.1         28           2
 G glycine            10.1         90           3
 H histidine           2.7         24           2
 I isoleucine          2.7         24           2
 K lysine              3.9         35           1
 L leucine            10.5         93           9
 M methionine          1.2         11           1
 N asparagine          3.1         28           1
 P proline             8.1         72           4
 Q glutamine           4.6         41           2
 R arginine            5.7         51           2
 S serine              6.3         56           2
 T threonine           4.8         43           2
 V valine              5.2         46           2
 W tryptophan          1.7         15           1
 Y tyrosine            1.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mo... 
ADAMTS1               0.466   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.420   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS4               0.358   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.340   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.329   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.313   a disintegrin-like and metalloprotease with thrombo...
ADAMTS7               0.231   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.219   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.210   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.206   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.204   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.192   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.189   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.188   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.184   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.183   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS17              0.173   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.172   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.142   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.142   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.132   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.088   papilin 
ADAMTS2               0.086   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL3              0.082   ADAMTS-like 3 precursor 
ADAMTSL1              0.082   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.082   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL2              0.074   ADAMTS-like 2 precursor 
ADAMTSL2              0.074   ADAMTS-like 2 precursor 
ADAMTSL5              0.069   ADAMTS-like 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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