PKD1 12110

Name: PKD1	Sequence: fasta or formatted (4303aa)		NCBI GI: 205360954
Description: polycystin 1 isoform 1 precursor		Referenced in: Kidney
Other entries for this name: alt prot [4302aa] polycystin 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 451 3 C cysteine 2.2 95 2 D aspartate 3.6 153 2 E glutamate 5.0 216 3 F phenylalanine 3.4 146 2 G glycine 8.3 355 3 H histidine 2.5 106 1 I isoleucine 2.0 85 2 K lysine 1.2 52 1 L leucine 11.9 510 3 M methionine 0.9 39 2 N asparagine 2.9 124 2 P proline 7.0 301 5 Q glutamine 3.9 168 2 R arginine 6.4 277 2 S serine 9.0 388 3 T threonine 5.5 235 3 V valine 9.5 410 3 W tryptophan 2.1 89 1 Y tyrosine 2.4 103 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 polycystin 1 isoform 1 precursor PKD1 0.999 polycystin 1 isoform 2 precursor PKD1L2 0.035 polycystin 1-like 2 isoform a PKD1L3 0.018 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L3 0.018 PREDICTED: polycystin 1-like 3 PKD1L3 0.018 polycystin 1-like 3 PKD1L3 0.018 PREDICTED: polycystic kidney disease 1-like 3 [Homo... LOC100288299 0.017 PREDICTED: hypothetical protein XP_002343464 PKD2 0.011 polycystin 2 PKD1L1 0.011 polycystin-1L1 PKD2L1 0.010 polycystic kidney disease 2-like 1 PKDREJ 0.009 receptor for egg jelly-like protein precursor PKD2L2 0.007 polycystic kidney disease 2-like 2 ISLR2 0.006 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.006 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.006 immunoglobulin superfamily containing leucine-rich r... ISLR2 0.006 immunoglobulin superfamily containing leucine-rich ... LOXHD1 0.006 lipoxygenase homology domains 1 isoform 1 LOXHD1 0.006 lipoxygenase homology domains 1 isoform 2 LOXHD1 0.006 lipoxygenase homology domains 1 isoform 3 GPR125 0.006 G protein-coupled receptor 125 CPN2 0.006 carboxypeptidase N, polypeptide 2, 83kD SLIT1 0.006 slit homolog 1 GP5 0.005 glycoprotein V (platelet) ISLR 0.005 immunoglobulin superfamily containing leucine-rich r... ISLR 0.005 immunoglobulin superfamily containing leucine-rich re... LRG1 0.005 leucine-rich alpha-2-glycoprotein 1 SLIT3 0.005 slit homolog 3 FLRT1 0.005 fibronectin leucine rich transmembrane protein 1 [Ho... SLIT2 0.005 slit homolog 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.