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Search of human proteins with 22547224
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22547224 jerky homolog-like [Homo sapiens]
(524 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22547224 jerky homolog-like [Homo sapiens] 1048 0.0
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 674 0.0
gi|117938293 jerky isoform a [Homo sapiens] 305 7e-83
gi|117938295 jerky isoform b [Homo sapiens] 305 7e-83
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 246 3e-65
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 218 1e-56
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 178 1e-44
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 173 3e-43
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 159 8e-39
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 117 2e-26
gi|21735415 centromere protein B [Homo sapiens] 117 3e-26
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 115 1e-25
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 115 1e-25
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 106 6e-23
gi|49619234 hypothetical protein LOC92806 [Homo sapiens] 63 6e-10
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 50 5e-06
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 35 0.13
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 35 0.13
gi|110832839 ATP-binding cassette, sub-family C, member 9 isofor... 35 0.17
gi|110832835 ATP-binding cassette, sub-family C, member 9 isofor... 35 0.17
gi|110832837 ATP-binding cassette, sub-family C, member 9 isofor... 35 0.17
gi|42740893 Ras association and pleckstrin homology domains 1 is... 33 0.64
gi|153252214 solute carrier family 39 (zinc transporter), member... 32 1.4
gi|153252201 solute carrier family 39 (zinc transporter), member... 32 1.4
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 32 1.9
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 1048 bits (2710), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD 60
MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD
Sbjct: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD 60
Query: 61 STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFN 120
STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFN
Sbjct: 61 STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFN 120
Query: 121 PSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETG 180
PSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETG
Sbjct: 121 PSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETG 180
Query: 181 LFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKST 240
LFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKST
Sbjct: 181 LFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKST 240
Query: 241 DTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNE 300
DTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNE
Sbjct: 241 DTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNE 300
Query: 301 NVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKL 360
NVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKL
Sbjct: 301 NVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKL 360
Query: 361 TLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGL 420
TLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGL
Sbjct: 361 TLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGL 420
Query: 421 ENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENEEEEIELIPEKHINHAA 480
ENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENEEEEIELIPEKHINHAA
Sbjct: 421 ENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENEEEEIELIPEKHINHAA 480
Query: 481 ALQWTENLLDYLEQQGDMILPDRLVIRKLRATIRNKQKMTKSSQ 524
ALQWTENLLDYLEQQGDMILPDRLVIRKLRATIRNKQKMTKSSQ
Sbjct: 481 ALQWTENLLDYLEQQGDMILPDRLVIRKLRATIRNKQKMTKSSQ 524
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 674 bits (1738), Expect = 0.0
Identities = 325/519 (62%), Positives = 408/519 (78%)
Query: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD 60
M GKRKRVVLTIKDKLDIIKKLE+G S K+L+V+YGIGE+TVRDI+KNKE+II YA+SSD
Sbjct: 1 MLGKRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSD 60
Query: 61 STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFN 120
TS ++KRKSMK S YEELDR M+EWFNQQ+ G P+SG ICAK+A+FFF ALGM+GDFN
Sbjct: 61 PTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFN 120
Query: 121 PSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETG 180
S+GWLTRFKQRH I + + +L GDETA +FC +F++F+E+ENLQPEQIY AD+TG
Sbjct: 121 ASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTG 180
Query: 181 LFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKST 240
LFWKCLPSR ++ + G +S ER+ IMCCANATGLHKL LCVVGKAKKPR+FK T
Sbjct: 181 LFWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGT 240
Query: 241 DTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNE 300
D NLPV+Y+SQKGAW++ S+FRQWF+K FVPQV+++L+SKGL EKAVLLLD P PNE
Sbjct: 241 DLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNE 300
Query: 301 NVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKL 360
+L SDDG+I KYLPPNV SLIQP QGV+AT+KR YRAGLLQ ++EGND K FWK L
Sbjct: 301 EMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGNDPKIFWKNL 360
Query: 361 TLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGL 420
T+LDA+YE++ AWN+VK TI++AWKK+ P EE ++ D I A +A +LQ+T+
Sbjct: 361 TVLDAIYEVSRAWNMVKSSTITKAWKKLFPGNEENSGMNIDEGAILAANLATVLQNTEEC 420
Query: 421 ENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENEEEEIELIPEKHINHAA 480
E+V EN+++W + S++ +VLTDSE A++ ++ + EL PEKHI+H A
Sbjct: 421 EHVDIENIDQWFDSRSSDSSCQVLTDSESAEDQTKAAEQKPSSKSRKTELNPEKHISHKA 480
Query: 481 ALQWTENLLDYLEQQGDMILPDRLVIRKLRATIRNKQKM 519
AL+WTENLLDYLEQQ DM+L D+LV+R+LR IR KQK+
Sbjct: 481 ALEWTENLLDYLEQQDDMLLSDKLVLRRLRTIIRKKQKI 519
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 305 bits (781), Expect = 7e-83
Identities = 167/402 (41%), Positives = 241/402 (59%), Gaps = 17/402 (4%)
Query: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KRKRVVLT+K+K+DI +LE G S K L Y +G +T+ DIR +K +++ + +SSDS
Sbjct: 14 KRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNK 73
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
L +R+++ E LDR + EWF +R++G P+SGP+ ++A+ F+ + + S
Sbjct: 74 ALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSG 133
Query: 124 GWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFW 183
GWL RFK RH I++++ +E+ + D A E FC FR L EQ+YNADETGLFW
Sbjct: 134 GWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFW 193
Query: 184 KCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDTL 243
+CLP+ +G VPG K ++R+T++ CANATG H+LK +GK PR+FK
Sbjct: 194 RCLPN--PTPEGG-AVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQ-- 248
Query: 244 NLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQE--KAVLLLDNSPTHPNEN 301
+LPV+Y +Q AW+D IF WF IFVP VRE+ R+ GL E KAVLLLD+S HP E
Sbjct: 249 HLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVLLLDSSRAHPQEA 308
Query: 302 VLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKLT 361
L S + +F +LP +VASL+QP +QG+ R ++N + L+ +
Sbjct: 309 ELVSSN--VFTIFLPASVASLVQPMEQGI--------RRDFMRNFINPPVPLQGPHARYN 358
Query: 362 LLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVE 403
+ DA++ +A AWN V RAW+K+ P V E + E
Sbjct: 359 MNDAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEE 400
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 305 bits (781), Expect = 7e-83
Identities = 167/402 (41%), Positives = 241/402 (59%), Gaps = 17/402 (4%)
Query: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KRKRVVLT+K+K+DI +LE G S K L Y +G +T+ DIR +K +++ + +SSDS
Sbjct: 14 KRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNK 73
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
L +R+++ E LDR + EWF +R++G P+SGP+ ++A+ F+ + + S
Sbjct: 74 ALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSG 133
Query: 124 GWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFW 183
GWL RFK RH I++++ +E+ + D A E FC FR L EQ+YNADETGLFW
Sbjct: 134 GWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFW 193
Query: 184 KCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDTL 243
+CLP+ +G VPG K ++R+T++ CANATG H+LK +GK PR+FK
Sbjct: 194 RCLPN--PTPEGG-AVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQ-- 248
Query: 244 NLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQE--KAVLLLDNSPTHPNEN 301
+LPV+Y +Q AW+D IF WF IFVP VRE+ R+ GL E KAVLLLD+S HP E
Sbjct: 249 HLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVLLLDSSRAHPQEA 308
Query: 302 VLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKLT 361
L S + +F +LP +VASL+QP +QG+ R ++N + L+ +
Sbjct: 309 ELVSSN--VFTIFLPASVASLVQPMEQGI--------RRDFMRNFINPPVPLQGPHARYN 358
Query: 362 LLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVE 403
+ DA++ +A AWN V RAW+K+ P V E + E
Sbjct: 359 MNDAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEE 400
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 246 bits (629), Expect = 3e-65
Identities = 166/509 (32%), Positives = 258/509 (50%), Gaps = 33/509 (6%)
Query: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD 60
M+ + K L +++K+ ++ ++E G S K + +GI ++T DI+KNK+ I+ + D
Sbjct: 1 MNKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQD 60
Query: 61 STSLLA-KRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDF 119
+ A KRK + Y ++D A+ W+ Q+R+ G P+ G AE F G DF
Sbjct: 61 MPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRT-DF 119
Query: 120 NPSAGWLTRFKQRHSIREINIRNER-LNGDETAVEDFCNNFRDFIERENLQPEQIYNADE 178
S GWL RF+ RH+I E+ L+ VE F I+ E L Q+Y+ DE
Sbjct: 120 KASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDE 179
Query: 179 TGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFK 238
T LFWK +P + +PG K +ER++ CANA G HKLK ++GK+K P+S K
Sbjct: 180 TDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVK 239
Query: 239 STDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREY----LRSKGLQEKAVLLLDNS 294
DT LPV Y K W +F +WF + FVP+VR + LR +A+LLLD+
Sbjct: 240 E-DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSC 298
Query: 295 PTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNL------- 347
P HP+ L S+DG+I + P N ++LIQP +QGVI + KR YR L+ +L
Sbjct: 299 PAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESD 358
Query: 348 ---EEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVED 404
E+G+ S K + A++ A +W VK +TI+ AW+ +L K+ ++D +
Sbjct: 359 DEQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLL----YKKEPEYDFQG 414
Query: 405 ISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENE 464
+ IL+ LE ++ WL D E G + T I + + E +E +
Sbjct: 415 LEHGDYREILEKCGELETKLDDD-RVWLNGDE-EKGCLLKTKGGITKEVVQKGGE-AEKQ 471
Query: 465 EEEIELIPEKHINHAAALQWTENLLDYLE 493
E +L +A + + LLD+++
Sbjct: 472 TAEFKL--------SAVRESLDYLLDFVD 492
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 218 bits (555), Expect = 1e-56
Identities = 139/469 (29%), Positives = 236/469 (50%), Gaps = 36/469 (7%)
Query: 2 SGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD- 60
S ++ R LT+ KL++IK E+G S ++ G+ TV + KEK + S+
Sbjct: 7 SERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATP 66
Query: 61 -STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL------ 113
+T ++ KR S+ ++++ ++ W Q ++ P+S + +A F ++
Sbjct: 67 MNTRMIRKRNSL----IADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGV 122
Query: 114 -GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQ 172
+ F S GW RFK+R I + E + D A + I+ +Q
Sbjct: 123 EAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTKQQ 182
Query: 173 IYNADETGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAK 232
I+N DET +WK +PSR + + + +VPG K+ ++R+T++ ANA G KLK ++ ++
Sbjct: 183 IFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSE 242
Query: 233 KPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLD 292
PR+ K+ LPV Y A M +F WF + F P V Y K + K +LL+D
Sbjct: 243 NPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLID 302
Query: 293 NSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNY-------RAGLLQN 345
N+P+HP L +I ++P N S++QP DQGVI+T K Y + +
Sbjct: 303 NAPSHP--RALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS 360
Query: 346 NLEEG---NDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILP-MVEEKESLDFD 401
++ +G + LK+FWK T+LDA+ I +W VK T++ WKK++P ++++ E
Sbjct: 361 DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTS 420
Query: 402 VEDISVATVAAILQHTKGLE-NVTTENLEKWLEVDSTEPGYEVLTDSEI 449
VE++S A +++ K LE V E++ + L+ + LTD E+
Sbjct: 421 VEEVS----ADVVEIAKELELEVEPEDVTELLQSHD-----KTLTDEEL 460
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 178 bits (451), Expect = 1e-44
Identities = 141/514 (27%), Positives = 248/514 (48%), Gaps = 40/514 (7%)
Query: 3 GKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDST 62
G +KR ++++K+ ++ ++ G +A +GI +T+ K++ K +
Sbjct: 5 GNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEEKVREA 61
Query: 63 SLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPS 122
S+ +RK M+ ++Y+++D+A+ WF + AK ++G + K+A LG D +F S
Sbjct: 62 SVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD-NFQAS 120
Query: 123 AGWLTRFKQRHSI------REINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNA 176
GWL RF+ RH I RE + R G + E I + P+ I+NA
Sbjct: 121 VGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIA--DYSPDDIFNA 178
Query: 177 DETGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRS 236
DETG+F++ LP KG G K ++R+T + C NA+G K++ +VG++ P
Sbjct: 179 DETGVFFQLLPQHTLAAKGD-HCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHC 237
Query: 237 FKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPT 296
K+ +LP Y + + AWM +F +W ++ R K + + +LL+DN
Sbjct: 238 LKNIH--SLPCDYRANQWAWMTRDLFNEWLMQVDA-------RMKRAERRILLLIDNCSA 288
Query: 297 HPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSF 356
H N+L + +I YLP N +++QP + G+I TMK Y++ LL+ L + N +
Sbjct: 289 H---NMLPHLE-RIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSED- 343
Query: 357 WKKLTLLDALYEIAMAWNLVKPVTISRAWKK--ILPMVEEKESLDFDVEDISVATVAAI- 413
+++ + A+ IA AW VKP T+ + W+K I+PM E + D E + AI
Sbjct: 344 QEEVDIKQAIDMIAAAWWSVKPSTVVKCWQKAGIVPM----EFAECDTESAASEPDIAIE 399
Query: 414 -LQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRR--AQGQADESSENEEEEIEL 470
L HT + N + + + + + D++II+ A E+ +E E+ L
Sbjct: 400 KLWHTVAIA-TCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENTSEAGSEDEGEVSL 458
Query: 471 IPEKHINHAAALQWTENLLDYLEQQGDMILPDRL 504
+ + A+ + L +L D +PD +
Sbjct: 459 PEQPKVTITEAISSVQKLRQFLSTCVD--IPDAI 490
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 173 bits (439), Expect = 3e-43
Identities = 129/469 (27%), Positives = 232/469 (49%), Gaps = 31/469 (6%)
Query: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSL 64
+K+ L+I++K+DII +E G ++A YGI + ++ I KNK+K++ + +S
Sbjct: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVL---EAFESLRF 72
Query: 65 LAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAG 124
KRK ++ + Y +L+ A++ W+ + P++GP+ +A F LG DF S G
Sbjct: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLG-HNDFKCSNG 131
Query: 125 WLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIE--RENLQPEQIYNADETGLF 182
WL RFK R+ + R + + V+ +++ + + P+ ++N ETGL
Sbjct: 132 WLDRFKSRYG---LVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLL 188
Query: 183 WKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDT 242
++ LP+ KG+ G K ++R+T++ N G KL L V+GK + P FK
Sbjct: 189 YRMLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLK- 246
Query: 243 LNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENV 302
+LPV Y + + AWM +F QW K+ E+ + Q + V+ +++ P HP
Sbjct: 247 -SLPVCYEANRMAWMTSDVFEQWMRKL----DEEF---QAQQRRVVIFVESFPAHPEVKN 298
Query: 303 LRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKLTL 362
L+S I + P ++S QGVI ++K YR L++ L K F +L
Sbjct: 299 LKS----IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF--TFSL 352
Query: 363 LDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVE-DISVATVAAILQHTKGLE 421
LDA+ + + W V P TI +++++ ++ ES + E D + VA L G+E
Sbjct: 353 LDAVDTLHLCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADAL--GAGVE 410
Query: 422 NVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADES---SENEEEE 467
++E++ +D E + + I + ++DE+ + +EE++
Sbjct: 411 FPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDD 459
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 159 bits (401), Expect = 8e-39
Identities = 141/495 (28%), Positives = 218/495 (44%), Gaps = 77/495 (15%)
Query: 7 RVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLA 66
R +IKDKL I++++ G + +G+ T+R K++ K+ + +
Sbjct: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGG-EVGT 62
Query: 67 KRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL-GMDGDFNPSAGW 125
+RK M+ + EE+DRA+ WF R G P+SGP+ +AE F + G + F S GW
Sbjct: 63 QRKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGW 122
Query: 126 LTRFKQRHSIREINIRNERLNG-----------DETAVEDFCNNFRDFIERENLQP---- 170
R+++RH I E +E A+ D R P
Sbjct: 123 FWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPD---RAPAPPPPAE 179
Query: 171 -----EQIYNADETGLFWKCLPSRISVI------KGKCTVPGHKSIEERVTIMCCANATG 219
EQIY+A TGL+WK LP + + G C G + +RVT++ AN TG
Sbjct: 180 GGYGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGC---GRRWRGDRVTVLLAANLTG 236
Query: 220 LHKLKLCVVGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLR 279
HKLK V+G+ P S + + P SY AW+ + R WF + FVP V+ YLR
Sbjct: 237 SHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLR 296
Query: 280 SKGLQEKAVLLLDN------------------------SPTHPNENVLRSDDGQIFAKYL 315
LQ+KAVLL+ + P P E L++ DG + +L
Sbjct: 297 RSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEE-LQTPDGAVRVLFL 355
Query: 316 P--PNVASLIQPSDQGVIATMKRNYRAGLLQ--NNLEEGNDLKSFWKKLTLLDALYEIAM 371
+ A + P +QGV+A K+ Y+ LL+ + G+ L F + L D LY +
Sbjct: 356 SKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPL-DFMRSFMLKDMLYLAGL 414
Query: 372 AWNLVKPVTISRAWKKILPMVEEKESLDFDVEDISVATVAAILQHTKGLENVT------- 424
+W+LV+ +I R W L E + + A AA +H++ L ++T
Sbjct: 415 SWDLVQAGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAA--EHSRVLSDLTHLAALAY 472
Query: 425 ----TENLEKWLEVD 435
E + +WL +D
Sbjct: 473 KCLAPEEVAEWLHLD 487
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 117 bits (294), Expect = 2e-26
Identities = 55/163 (33%), Positives = 98/163 (60%)
Query: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KRK + L+I K+ +++KL+ G S K L YG+G TT+ D++K K+K++ + + SD
Sbjct: 60 KRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQI 119
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
L+ RK++ + E+LDR + EW Q+R++ P++G + K+A+ + L ++G+ S
Sbjct: 120 LMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEYST 179
Query: 124 GWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERE 166
GWL +FK+RH I+ + + + A E F NF + E++
Sbjct: 180 GWLQKFKKRHGIKFLKTCGNKASAGHEATEKFTGNFSNDDEQD 222
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 117 bits (293), Expect = 3e-26
Identities = 127/491 (25%), Positives = 211/491 (42%), Gaps = 59/491 (12%)
Query: 6 KRVVLTIKDKLDIIKKLEDGGSSK--QLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KR LT ++K II+++E+ + ++A + I +T+ I KNK I+ AS
Sbjct: 4 KRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAIL--ASERKYGV 61
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
RK+ K S Y++L+ ++ WF Q RA G P+ G I ++A LGMD DF S
Sbjct: 62 ASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMD-DFTASN 120
Query: 124 GWLTRFKQRHSI-----------REINIRNERLNGDETAV--EDFCNNFRDFIERENLQP 170
GWL RF++RH + R R AV E + + RE P
Sbjct: 121 GWLDRFRRRHGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWRAREEQPP 180
Query: 171 --------EQIYNADETGLFWKCLPSRISVIKGKCTVPGH-KSIEERVTIMCCANATGLH 221
+ +++A ET L++ LP + + G C G + +R++++ CANA G
Sbjct: 181 SVAEGYASQDVFSATETSLWYDFLPDQAA---GLCGGDGRPRQATQRLSVLLCANADGSE 237
Query: 222 KLKLCVVGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSK 281
KL V GK+ KPR+ ++ LP Y + + ++ + E
Sbjct: 238 KLPPLVAGKSAKPRAGQA----GLPCDYTANSKGGVTTQALAKYLKALDTRMAAE----- 288
Query: 282 GLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAG 341
+ VLLL + +++ S + + PP + P ++GV+ +K +YR
Sbjct: 289 ---SRRVLLL--AGRLAAQSLDTSGLRHVQLAFFPPGT---VHPLERGVVQQVKGHYRQA 340
Query: 342 LLQNNLE--EGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKI----LPMVEEK 395
+L + EG D +L L +AL+ +A AW V+P I+ +++ P
Sbjct: 341 MLLKAMAALEGQDPSGL--QLGLTEALHFVAAAWQAVEPSDIAACFREAGFGGGPNATIT 398
Query: 396 ESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQG 455
SL + E+ + +G E E E E + G E+ + E+
Sbjct: 399 TSLKSEGEEEEEEEEEEEEEEGEGEE----EEEEGEEEEEEGGEGEELGEEEEVEEEGDV 454
Query: 456 QADESSENEEE 466
+DE E +EE
Sbjct: 455 DSDEEEEEDEE 465
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 115 bits (288), Expect = 1e-25
Identities = 54/163 (33%), Positives = 97/163 (59%)
Query: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KRK + L+I K+ +++KL+ G S K L YG+G TT+ D++K K+K++ + + SD
Sbjct: 60 KRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQI 119
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
L+ RK++ + E+LDR + EW Q+R++ P++G + K+A+ + L ++G+ S
Sbjct: 120 LMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEYST 179
Query: 124 GWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERE 166
GWL +FK+RH I+ + + + A E F F + E++
Sbjct: 180 GWLQKFKKRHGIKFLKTCGNKASAGHEATEKFTGKFSNDDEQD 222
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 115 bits (288), Expect = 1e-25
Identities = 54/163 (33%), Positives = 97/163 (59%)
Query: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTS 63
KRK + L+I K+ +++KL+ G S K L YG+G TT+ D++K K+K++ + + SD
Sbjct: 60 KRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQI 119
Query: 64 LLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSA 123
L+ RK++ + E+LDR + EW Q+R++ P++G + K+A+ + L ++G+ S
Sbjct: 120 LMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEYST 179
Query: 124 GWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERE 166
GWL +FK+RH I+ + + + A E F F + E++
Sbjct: 180 GWLQKFKKRHGIKFLKTCGNKASAGHEATEKFTGKFSNDDEQD 222
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 106 bits (264), Expect = 6e-23
Identities = 100/395 (25%), Positives = 173/395 (43%), Gaps = 55/395 (13%)
Query: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSK-QLAVIYGIGETTVRDIRKNKEKIITYASSS 59
+S K+K L++ +K+ +++ L++ S+ ++A + + + + I KNKEK++ S
Sbjct: 3 LSSKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWCSG 62
Query: 60 DSTSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDF 119
+ +RK + S Y +D A+L W++ RAK ++GP+ +A+ +G DF
Sbjct: 63 TANR---ERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMGQ--DF 117
Query: 120 NPSAGWLTRFKQRHSI----REI---NIRNERLNGDETAVEDFCNNFRDFIERENLQPEQ 172
PS GWL R+K+R+++ R + + E T+ + +DF PE
Sbjct: 118 VPSIGWLVRWKRRNNVGFGARHVLAPSFPPEPPPPGLTSQAQLPLSLKDF------SPED 171
Query: 173 IYNADETGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAK 232
++ E L ++ +P G C ++V ++ CAN+ G K ++ + G
Sbjct: 172 VFGCAELPLLYRAVPGSF----GAC---------DQVQVLLCANSRGTEKRRVLLGGLQA 218
Query: 233 KPRSFKSTDTLNLPVSYFSQKG-AWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLL 291
PR F + LP SY G W+ +W + ++ R G Q + V LL
Sbjct: 219 APRCFFGIRSEALPASYHPDLGIPWL------EW--------LAQFDRDMGQQGRQVALL 264
Query: 292 DNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQ-----NN 346
+ L G K LP +S P V+ K +YR LL +
Sbjct: 265 LAARV---VEELAGLPGLYHVKLLPLAASSTTPPLPSSVVRAFKAHYRHRLLGKLAAIQS 321
Query: 347 LEEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTI 381
+G L +T+LDAL+ + AW V P I
Sbjct: 322 ERDGTSLAEAGAGITVLDALHVASAAWAKVPPQLI 356
>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
Length = 187
Score = 63.2 bits (152), Expect = 6e-10
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 2 SGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDS 61
S KR+R +T+ KL+++++ E G Q+A + +TV IR +KEKI ASS +
Sbjct: 14 SAKRERKAITLDLKLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEKI--KASSQIA 71
Query: 62 TSLLAKRKSM-KPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEF----FFYALGMD 116
T L A R + + ++ E +++ + W Q +S I ++AEF + G
Sbjct: 72 TPLRASRLTRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKAEFDDLQREHGEGSQ 131
Query: 117 GD-FNPSAGWLTRFKQRHSI 135
+ F+ S GWL RFK+ H +
Sbjct: 132 TERFHASQGWLVRFKECHCL 151
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 50.1 bits (118), Expect = 5e-06
Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 58/415 (13%)
Query: 15 KLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPS 74
KL +++ E + Q A +G+ E VRD RK K ++ ++ ++ + K
Sbjct: 205 KLMVVEYAESTNNC-QAAKQFGVLEKNVRDWRKVKPQL------QNAHAMRRAFRGPKNG 257
Query: 75 MYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGM-DGDFNPSAGWLTRFKQRH 133
+ +D+ + E+ +AKG+PI+ +A + + + F S GW R +R+
Sbjct: 258 RFALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRY 317
Query: 134 --SIREINIRNERLNGDET-AVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRI 190
S+R + L D T + + + + + Q+ NADET + + +PSR+
Sbjct: 318 DLSLRHKVPVPQHLPEDLTEKLVTYQRSVLALRRAHDYEVAQMGNADETPICLE-VPSRV 376
Query: 191 SV-IKGKCTV----PGHKSIEERVTIMCCANATGLHKLKLCVV--GKAKKPRSFKSTDTL 243
+V +G+ V PG + + ++T M A G KL ++ G P F S +
Sbjct: 377 TVDNQGEKPVLVKTPGREKL--KITAMLGVLADG-RKLPPYIILRGTYIPPGKFPSGMEI 433
Query: 244 NLPVSYFSQKGAWMDLSIFRQWFDKIF------VPQVREYLRSKGLQEKAVLLLDNSPTH 297
+ WM + + W + ++ VP+ R L G + A + NS
Sbjct: 434 R------CHRYGWMTEDLMQDWLEVVWRRRTGAVPKQRGMLILNGFRGHATDSVKNSMES 487
Query: 298 PNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRA----GLLQNNL---EEG 350
N +++ +P + S +Q D V + + RA LL NL G
Sbjct: 488 MNTDMV----------IIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTG 537
Query: 351 NDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKK--ILPMVEEKESLDFDVE 403
N KK L L + +AWN + +I + +KK I +EE++ + +++E
Sbjct: 538 NA-----KKPPLGLFLEWVMVAWNSISSESIVQGFKKCHISSNLEEEDDVLWEIE 587
>gi|46397390 pogo transposable element with ZNF domain isoform 1 [Homo
sapiens]
Length = 1410
Score = 35.4 bits (80), Expect = 0.13
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 30/268 (11%)
Query: 78 ELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAGWLTRFKQRHSIRE 137
E + + EW QR + P++ ++A +L +G F S W RF RH +
Sbjct: 1026 EAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSL--EGGFKISYEWAVRFMLRHHLTP 1083
Query: 138 INIRNERLNGDETAVEDFCNN---FRDFIER----ENLQPEQIYNADETGLF--WKCLPS 188
+ R T +D N F DF++R ++L I DE LF + L S
Sbjct: 1084 ----HARRAVAHTLPKDVAENAGLFIDFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSS 1139
Query: 189 RISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDTLNLPVS 248
TV G V + A+ T L L + G+ +P + + L
Sbjct: 1140 DDRKENALQTV-GTGEPWCDVVLAILADGTVLPTL-VFYRGQMDQPANMPDSILLE---- 1193
Query: 249 YFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRS-DD 307
+++ + D I W +++ RSKG+ L++D TH +E VL
Sbjct: 1194 --AKESGYSDDEIMELWSTRVWQKHT-ACQRSKGM-----LVMDCHRTHLSEEVLAMLSA 1245
Query: 308 GQIFAKYLPPNVASLIQPSDQGVIATMK 335
+P +S IQP D + T+K
Sbjct: 1246 SSTLPAVVPAGCSSKIQPLDVCIKRTVK 1273
>gi|46397394 pogo transposable element with ZNF domain isoform 2 [Homo
sapiens]
Length = 1357
Score = 35.4 bits (80), Expect = 0.13
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 30/268 (11%)
Query: 78 ELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAGWLTRFKQRHSIRE 137
E + + EW QR + P++ ++A +L +G F S W RF RH +
Sbjct: 973 EAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSL--EGGFKISYEWAVRFMLRHHLTP 1030
Query: 138 INIRNERLNGDETAVEDFCNN---FRDFIER----ENLQPEQIYNADETGLF--WKCLPS 188
+ R T +D N F DF++R ++L I DE LF + L S
Sbjct: 1031 ----HARRAVAHTLPKDVAENAGLFIDFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSS 1086
Query: 189 RISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDTLNLPVS 248
TV G V + A+ T L L + G+ +P + + L
Sbjct: 1087 DDRKENALQTV-GTGEPWCDVVLAILADGTVLPTL-VFYRGQMDQPANMPDSILLE---- 1140
Query: 249 YFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRS-DD 307
+++ + D I W +++ RSKG+ L++D TH +E VL
Sbjct: 1141 --AKESGYSDDEIMELWSTRVWQKHT-ACQRSKGM-----LVMDCHRTHLSEEVLAMLSA 1192
Query: 308 GQIFAKYLPPNVASLIQPSDQGVIATMK 335
+P +S IQP D + T+K
Sbjct: 1193 SSTLPAVVPAGCSSKIQPLDVCIKRTVK 1220
>gi|110832839 ATP-binding cassette, sub-family C, member 9 isoform
SUR2A-delta-14 [Homo sapiens]
Length = 1513
Score = 35.0 bits (79), Expect = 0.17
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 402 VEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESS 461
++DI V + +H K L N + LEK +E D T + L + R A+ Q ++
Sbjct: 860 LKDIQTKDVE-LYEHWKTLMNRQDQELEKDMEADQTTLERKTLRRAMYSREAKAQMEDED 918
Query: 462 ENEEEE 467
E EEEE
Sbjct: 919 EEEEEE 924
>gi|110832835 ATP-binding cassette, sub-family C, member 9 isoform
SUR2A [Homo sapiens]
Length = 1549
Score = 35.0 bits (79), Expect = 0.17
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 402 VEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESS 461
++DI V + +H K L N + LEK +E D T + L + R A+ Q ++
Sbjct: 896 LKDIQTKDVE-LYEHWKTLMNRQDQELEKDMEADQTTLERKTLRRAMYSREAKAQMEDED 954
Query: 462 ENEEEE 467
E EEEE
Sbjct: 955 EEEEEE 960
>gi|110832837 ATP-binding cassette, sub-family C, member 9 isoform
SUR2B [Homo sapiens]
Length = 1549
Score = 35.0 bits (79), Expect = 0.17
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 402 VEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESS 461
++DI V + +H K L N + LEK +E D T + L + R A+ Q ++
Sbjct: 896 LKDIQTKDVE-LYEHWKTLMNRQDQELEKDMEADQTTLERKTLRRAMYSREAKAQMEDED 954
Query: 462 ENEEEE 467
E EEEE
Sbjct: 955 EEEEEE 960
>gi|42740893 Ras association and pleckstrin homology domains 1
isoform 3 [Homo sapiens]
Length = 644
Score = 33.1 bits (74), Expect = 0.64
Identities = 18/84 (21%), Positives = 41/84 (48%)
Query: 399 DFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQAD 458
D +V IS ++ ++I ++++ + + + E+D T G + + +R + QA
Sbjct: 198 DAEVHSISNSSHSSITSAASSMDSLDIDKVTRPQELDLTHQGQPITEHAISLRCSSKQAK 257
Query: 459 ESSENEEEEIELIPEKHINHAAAL 482
+ EE+ EL P +++ +L
Sbjct: 258 RHIDFTEEQAELTPHSYLDRETSL 281
>gi|153252214 solute carrier family 39 (zinc transporter), member 6
isoform 2 [Homo sapiens]
Length = 433
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 342 LLQNNLEEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFD 401
L N+EE S WK LT L LY + + ++ +T+ + +K ++K D D
Sbjct: 132 LSSQNIEESAYFDSTWKGLTALGGLYFMFLVEHV---LTLIKQFKDKKKKNQKKPENDDD 188
Query: 402 VEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGY 441
VE + T + T + E +L DS EP +
Sbjct: 189 VEIKKQLSKYESQLSTNEEKVDTDDRTEGYLRADSQEPSH 228
>gi|153252201 solute carrier family 39 (zinc transporter), member 6
isoform 1 [Homo sapiens]
Length = 755
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 342 LLQNNLEEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFD 401
L N+EE S WK LT L LY + + ++ +T+ + +K ++K D D
Sbjct: 407 LSSQNIEESAYFDSTWKGLTALGGLYFMFLVEHV---LTLIKQFKDKKKKNQKKPENDDD 463
Query: 402 VEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGY 441
VE + T + T + E +L DS EP +
Sbjct: 464 VEIKKQLSKYESQLSTNEEKVDTDDRTEGYLRADSQEPSH 503
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 390 PMVEEKESLDFDVEDISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEI 449
P+ E + D V+ I V + + G + LE WLE++ PGYEV S+
Sbjct: 605 PLDETSQMSDLPVKVIHVESGKILT----GTDAPKAGQLEAWLEMN---PGYEVAPRSD- 656
Query: 450 IRRAQGQADESSENEEEE 467
G +E E EEE+
Sbjct: 657 -SEESGSEEEEEEEEEEQ 673
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,413,301
Number of Sequences: 37866
Number of extensions: 862084
Number of successful extensions: 2846
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2771
Number of HSP's gapped (non-prelim): 55
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.