Guide to the Human Genome
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Name: RAPH1 Sequence: fasta or formatted (644aa) NCBI GI: 42740893
Description:

Ras association and pleckstrin homology domains 1 isoform 3

Referenced in:

Ras

Other entries for this name:
alt prot [1250aa] Ras association and pleckstrin homology domains 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         38           2
 C cysteine            1.4          9           2
 D aspartate           6.8         44           2
 E glutamate           7.9         51           2
 F phenylalanine       1.7         11           1
 G glycine             3.9         25           1
 H histidine           3.1         20           1
 I isoleucine          4.3         28           1
 K lysine              8.1         52           2
 L leucine            10.1         65           3
 M methionine          2.3         15           2
 N asparagine          3.7         24           1
 P proline             2.6         17           1
 Q glutamine           5.9         38           2
 R arginine            4.7         30           2
 S serine             12.4         80           5
 T threonine           5.1         33           1
 V valine              5.4         35           1
 W tryptophan          1.2          8           1
 Y tyrosine            3.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association and pleckstrin homology domains 1 is... 
RAPH1                 0.897   Ras association and pleckstrin homology domains 1 is...
APBB1IP               0.315   amyloid beta (A4) precursor protein-binding, family ...
GRB14                 0.107   growth factor receptor-bound protein 14 
GRB10                 0.102   growth factor receptor-bound protein 10 isoform c [H...
GRB10                 0.102   growth factor receptor-bound protein 10 isoform c [H...
GRB10                 0.102   growth factor receptor-bound protein 10 isoform a [H...
GRB7                  0.094   growth factor receptor-bound protein 7 
GRB7                  0.094   growth factor receptor-bound protein 7 
GRB10                 0.054   growth factor receptor-bound protein 10 isoform b [H...
MYH13                 0.018   myosin, heavy polypeptide 13, skeletal muscle [Homo...
ARAP2                 0.018   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
CCDC18                0.016   sarcoma antigen NY-SAR-41 
CGNL1                 0.014   cingulin-like 1 
ZEB1                  0.012   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.012   zinc finger E-box binding homeobox 1 isoform b [Hom...
CENPF                 0.012   centromere protein F 
DHX57                 0.012   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
CCDC110               0.010   coiled-coil domain containing 110 isoform b 
CCDC110               0.010   coiled-coil domain containing 110 isoform a 
CNKSR2                0.010   connector enhancer of kinase suppressor of Ras 2 [Ho...
MYH6                  0.010   myosin heavy chain 6 
WDR87                 0.010   NYD-SP11 protein 
KIAA1210              0.010   hypothetical protein LOC57481 
RRBP1                 0.009   ribosome binding protein 1 
RRBP1                 0.009   ribosome binding protein 1 
CLIP2                 0.009   CAP-GLY domain containing linker protein 2 isoform ...
IPCEF1                0.009   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.009   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.009   phosphoinositide-binding protein PIP3-E isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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