SMCR7 15094

Name: SMCR7	Sequence: fasta or formatted (454aa)		NCBI GI: 22538488
Description: Smith-Magenis syndrome chromosome region, candidate 7 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {465aa} Smith-Magenis syndrome chromosome region, candidate 7 isoform 2 alt prot {205aa} Smith-Magenis syndrome chromosome region, candidate 7 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 50 2 C cysteine 1.8 8 1 D aspartate 5.7 26 2 E glutamate 7.0 32 3 F phenylalanine 2.9 13 1 G glycine 7.7 35 2 H histidine 1.3 6 1 I isoleucine 2.0 9 1 K lysine 2.0 9 1 L leucine 18.3 83 5 M methionine 0.7 3 1 N asparagine 1.3 6 1 P proline 7.5 34 3 Q glutamine 3.7 17 1 R arginine 7.5 34 3 S serine 6.4 29 3 T threonine 3.1 14 1 V valine 7.0 32 2 W tryptophan 1.8 8 1 Y tyrosine 1.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Smith-Magenis syndrome chromosome region, candidate ... SMCR7 1.000 Smith-Magenis syndrome chromosome region, candidate... SMCR7L 0.381 hypothetical protein LOC54471 SMCR7 0.203 Smith-Magenis syndrome chromosome region, candidate... PELP1 0.017 proline, glutamic acid and leucine rich protein 1 [... CDGAP 0.016 Cdc42 GTPase-activating protein ZFHX4 0.013 zinc finger homeodomain 4 POU6F1 0.011 POU class 6 homeobox 1 VPS37C 0.011 vacuolar protein sorting 37C FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 LOC100291220 0.010 PREDICTED: hypothetical protein XP_002347633 FLJ22184 0.010 PREDICTED: hypothetical protein LOC80164 LOC100287224 0.010 PREDICTED: hypothetical protein XP_002343483 SF3A2 0.010 splicing factor 3a, subunit 2 NKX1-1 0.010 PREDICTED: NK1 homeobox 1 PRR12 0.010 proline rich 12 ADD1 0.009 adducin 1 (alpha) isoform b ADD1 0.009 adducin 1 (alpha) isoform a FAM22B 0.009 PREDICTED: hypothetical protein isoform 1 LOC100127988 0.009 PREDICTED: hypothetical protein MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 FAM22D 0.009 hypothetical protein LOC728130 CD248 0.009 tumor endothelial marker 1 precursor PTPN23 0.009 protein tyrosine phosphatase, non-receptor type 23 [... GLTSCR1 0.009 glioma tumor suppressor candidate region gene 1 [Ho... FAM22A 0.009 hypothetical protein LOC728118 LOC100292723 0.009 PREDICTED: hypothetical protein GRID2IP 0.009 glutamate receptor, ionotropic, delta 2 (Grid2) int... RFX1 0.009 regulatory factor X1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.