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Search of human proteins with 115527080
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115527080 metastasis associated protein [Homo sapiens]
(715 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115527080 metastasis associated protein [Homo sapiens] 1456 0.0
gi|14141170 metastasis-associated protein 2 [Homo sapiens] 793 0.0
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 770 0.0
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 155 1e-37
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 155 1e-37
gi|7661892 REST corepressor 1 [Homo sapiens] 67 8e-11
gi|94721313 mesoderm induction early response 1, family member 3... 59 2e-08
gi|45267839 mesoderm induction early response 1, family member 2... 58 3e-08
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 57 5e-08
gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 57 5e-08
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 57 5e-08
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 57 5e-08
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 55 2e-07
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 55 2e-07
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 55 2e-07
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 55 2e-07
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 55 2e-07
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 55 2e-07
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 55 2e-07
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 55 2e-07
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 55 2e-07
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 55 2e-07
gi|27734799 REST corepressor 2 [Homo sapiens] 54 5e-07
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 47 6e-05
gi|210031154 zinc finger protein 541 [Homo sapiens] 45 3e-04
gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 40 0.010
gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 40 0.010
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 35 0.32
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 35 0.32
gi|118918413 MICAL C-terminal like [Homo sapiens] 35 0.32
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 1456 bits (3769), Expect = 0.0
Identities = 715/715 (100%), Positives = 715/715 (100%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD 60
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD 60
Query: 61 KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT 120
KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT
Sbjct: 61 KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT 120
Query: 121 HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL 180
HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL
Sbjct: 121 HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL 180
Query: 181 LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM 240
LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM
Sbjct: 181 LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM 240
Query: 241 SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL 300
SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL
Sbjct: 241 SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL 300
Query: 301 EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN 360
EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN
Sbjct: 301 EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN 360
Query: 361 KPNPNQISVNNVKAGVVNGTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLCASC 420
KPNPNQISVNNVKAGVVNGTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLCASC
Sbjct: 361 KPNPNQISVNNVKAGVVNGTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLCASC 420
Query: 421 WTYWKKYGGLKMPTRLDGERPGPNRSNMSPHGLPARSSGSPKFAMKTRQAFYLHTTKLTR 480
WTYWKKYGGLKMPTRLDGERPGPNRSNMSPHGLPARSSGSPKFAMKTRQAFYLHTTKLTR
Sbjct: 421 WTYWKKYGGLKMPTRLDGERPGPNRSNMSPHGLPARSSGSPKFAMKTRQAFYLHTTKLTR 480
Query: 481 IARRLCREILRPWHAARHPYLPINSAAIKAECTARLPEASQSPLVLKQAVRKPLEAVLRY 540
IARRLCREILRPWHAARHPYLPINSAAIKAECTARLPEASQSPLVLKQAVRKPLEAVLRY
Sbjct: 481 IARRLCREILRPWHAARHPYLPINSAAIKAECTARLPEASQSPLVLKQAVRKPLEAVLRY 540
Query: 541 LETHPRPPKPDPVKSVSSVLSSLTPAKVAPVINNGSPTILGKRSYEQHNGVDGNMKKRLL 600
LETHPRPPKPDPVKSVSSVLSSLTPAKVAPVINNGSPTILGKRSYEQHNGVDGNMKKRLL
Sbjct: 541 LETHPRPPKPDPVKSVSSVLSSLTPAKVAPVINNGSPTILGKRSYEQHNGVDGNMKKRLL 600
Query: 601 MPSRGLANHGQARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRRRMNWIDAPDDVFYM 660
MPSRGLANHGQARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRRRMNWIDAPDDVFYM
Sbjct: 601 MPSRGLANHGQARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRRRMNWIDAPDDVFYM 660
Query: 661 ATEETRKIRKLLSSSETKRAARRPYKPIALRQSQALPPRPPPPAPVNDEPIVIED 715
ATEETRKIRKLLSSSETKRAARRPYKPIALRQSQALPPRPPPPAPVNDEPIVIED
Sbjct: 661 ATEETRKIRKLLSSSETKRAARRPYKPIALRQSQALPPRPPPPAPVNDEPIVIED 715
>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
Length = 668
Score = 793 bits (2048), Expect = 0.0
Identities = 424/733 (57%), Positives = 509/733 (69%), Gaps = 83/733 (11%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD 60
MAANMYRVGDYVYFENSSSNPYL+RRIEELNKTANGNVEAKVVC +RRRDISS+L +LAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD 60
Query: 61 KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT 120
+A E EEE + P + E+ +HQL+HRELFLSRQ ESLPAT
Sbjct: 61 SNAR-----------------EFEEESKQP---GVSEQQRHQLKHRELFLSRQFESLPAT 100
Query: 121 HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL 180
HIRGKCSVTLLNET+ L YLE+ED FFYSLV+DP QKTLLAD+GEIRVG +YQA+I D
Sbjct: 101 HIRGKCSVTLLNETDILSQYLEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDR 160
Query: 181 LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM 240
L EGE D R+Q ++E +VW+ NPLTD+QIDQFLVVAR+VGTFARALDCSSS+RQPSLHM
Sbjct: 161 LVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHM 220
Query: 241 SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL 300
SAAAASRDITLFHAMDTL +N YD++KA+S LVPQGGPVLCRDEMEEWSASEA LFEEAL
Sbjct: 221 SAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEAL 280
Query: 301 EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN 360
EKYGKDF DI+QDFLPWKSL SI+++YYMWKTTDRY+QQKRLKAAEA+SKLKQVYIP Y
Sbjct: 281 EKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYT 340
Query: 361 KPNPNQISVNNVKAGVVNGTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLCASC 420
KPNPNQI K G +NG G G CESC+TTQS QWY+WGPPNMQCRLCASC
Sbjct: 341 KPNPNQIISVGSKPG-MNGAGFQ-----KGLTCESCHTTQSAQWYAWGPPNMQCRLCASC 394
Query: 421 WTYWKKYGGLKMPTRLDGERPG------------PNRSNMSPHGLPARSSGSPKFAMKTR 468
W YWKKYGGLK PT+L+G G P ++SP+ S+ K K R
Sbjct: 395 WIYWKKYGGLKTPTQLEGATRGTTEPHSRGHLSRPEAQSLSPY---TTSANRAKLLAKNR 451
Query: 469 QAFYLHTTKLTRIARRLCREILRPWHAARHPYLPINSAAIKAECTARLPEASQSPLVLKQ 528
Q F L TTKLTR+ARR+CR++L+P AAR PY PIN+ AIKAEC+ RLP+A+++PL +
Sbjct: 452 QTFLLQTTKLTRLARRMCRDLLQPRRAARRPYAPINANAIKAECSIRLPKAAKTPLKIHP 511
Query: 529 AVRKPLEAVLRYLETHPRPPKPDPVKSVSSVLSSLTPAKVAPVINNGSPTILGKRSYEQH 588
VR PL +++ L + A + P G+ T + + Q+
Sbjct: 512 LVRLPLATIVKDL---------------------VAQAPLKPKTPRGTKTPINRNQLSQN 550
Query: 589 NGVDGNMKKRLLMPSRGLANHGQARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRRRM 648
G+ G M KR G A NG+ + IR S P KR+++
Sbjct: 551 RGLGGIMVKRAYETMAGAGVPFSA-----------NGRPLASG---IRSSSQPAAKRQKL 596
Query: 649 NWIDAPDDVFYMATEETRKIRKLLSSSETKRAARRPYKPIALRQSQALPPRPPPPAPV-- 706
N DAP+ V ++AT++TR +RK L+ E +RAARRP P+ ++ + + RPP P P
Sbjct: 597 NPADAPNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPT-LIAVRPPVPLPAPS 655
Query: 707 ----NDEPIVIED 715
+EPIV+ED
Sbjct: 656 HPASTNEPIVLED 668
>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
Length = 515
Score = 770 bits (1988), Expect = 0.0
Identities = 387/526 (73%), Positives = 431/526 (81%), Gaps = 31/526 (5%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD 60
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTA+GNVEAKVVCFYRRRDIS+TLI LAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLAD 60
Query: 61 KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT 120
KHA EIEEE E DL +K KHQL+HRELFLSRQ ESLPAT
Sbjct: 61 KHAK-----------------EIEEESETTVEADLTDKQKHQLKHRELFLSRQYESLPAT 103
Query: 121 HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL 180
HIRGKCSV LLNETES+ SYL++ED FFYSLVYDP KTLLADKGEIRVG RYQADI ++
Sbjct: 104 HIRGKCSVALLNETESVLSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEM 163
Query: 181 LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM 240
L EGE D R+QS+LE +VW+ ++PLTD+QIDQFLVVAR+VGTFARALDCSSSVRQPSLHM
Sbjct: 164 LLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFARALDCSSSVRQPSLHM 223
Query: 241 SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL 300
SAAAASRDITLFHAMDTL+++ YD+S AIS LVP GGPVLCRDEMEEWSASEA+LFEEAL
Sbjct: 224 SAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEAL 283
Query: 301 EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN 360
EKYGKDF DI+QDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIP Y+
Sbjct: 284 EKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYS 343
Query: 361 KPNPNQISVNNVKAGVVN---GTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLC 417
KPNPNQIS +N K G VN GT Q+P GRACESCY TQS+QWYSWGPPNMQCRLC
Sbjct: 344 KPNPNQISTSNGKPGAVNGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNMQCRLC 403
Query: 418 ASCWTYWKKYGGLKMPTRLDGERPGPNRSNMSP-----------HGLPARSSGSPKFAMK 466
A CW YWKKYGGLKMPT+ + E+ P+ + P G+P R++GSPK A+K
Sbjct: 404 AICWLYWKKYGGLKMPTQSEEEKLSPSPTTEDPRVRSHVSRQAMQGMPVRNTGSPKSAVK 463
Query: 467 TRQAFYLHTTKLTRIARRLCREILRPWHAARHPYLPINSAAIKAEC 512
TRQAF+LHTT T+ AR++C+ LR AAR P++ IN AAI+AEC
Sbjct: 464 TRQAFFLHTTYFTKFARQVCKNTLRLRQAARRPFVAINYAAIRAEC 509
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 155 bits (392), Expect = 1e-37
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 103 LRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLA 162
+++RELF+S +++ A +RGKC+++ ++ + + + R D FFY L Y+P+ + L +
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS 281
Query: 163 DKGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGT 222
+GEIRVG +QA + DL DG ++ E VW + D + +L ARS+
Sbjct: 282 TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMP--GVNDCDLLMYLRAARSMAA 339
Query: 223 FARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCR 282
FA D S+ AASRD T +A++TLH++ YD KA+ LV + P L
Sbjct: 340 FAGMCDGGST------EDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 283 DEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT-----DRYV 337
+ W+ E F + L +YGK+F I+++ LP K +I +YY WK T R
Sbjct: 394 ---KCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAH 450
Query: 338 QQKRLKAAEAESKLKQVYIPNYNKPN--PNQISVNNVKAGVVNGTGAPGQSPGAGRACES 395
++ R +A K + P N P+ P+ ++ A + + G AC
Sbjct: 451 RRHRRQAVFRRIKTRTASTP-VNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRH 509
Query: 396 CYTTQSYQWYSWGPPNMQCRLCASCWTYWKKYGGL 430
C+TT S W+ G N+ LC C ++KKYG L
Sbjct: 510 CFTTTSKDWHHGGRENI--LLCTDCRIHFKKYGEL 542
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 155 bits (392), Expect = 1e-37
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 103 LRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLA 162
+++RELF+S +++ A +RGKC+++ ++ + + + R D FFY L Y+P+ + L +
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS 281
Query: 163 DKGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGT 222
+GEIRVG +QA + DL DG ++ E VW + D + +L ARS+
Sbjct: 282 TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMP--GVNDCDLLMYLRAARSMAA 339
Query: 223 FARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCR 282
FA D S+ AASRD T +A++TLH++ YD KA+ LV + P L
Sbjct: 340 FAGMCDGGST------EDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 283 DEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT-----DRYV 337
+ W+ E F + L +YGK+F I+++ LP K +I +YY WK T R
Sbjct: 394 ---KCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAH 450
Query: 338 QQKRLKAAEAESKLKQVYIPNYNKPN--PNQISVNNVKAGVVNGTGAPGQSPGAGRACES 395
++ R +A K + P N P+ P+ ++ A + + G AC
Sbjct: 451 RRHRRQAVFRRIKTRTASTP-VNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRH 509
Query: 396 CYTTQSYQWYSWGPPNMQCRLCASCWTYWKKYGGL 430
C+TT S W+ G N+ LC C ++KKYG L
Sbjct: 510 CFTTTSKDWHHGGRENI--LLCTDCRIHFKKYGEL 542
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 66.6 bits (161), Expect = 8e-11
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 48/218 (22%)
Query: 165 GEIRVGNRYQADITDLLKEGEEDGRDQSR--LETQVWEAHNPLTDKQIDQFLVVARSVGT 222
G +RVG +YQA + D + R Q R L VW + L++ ++D+++ +A+
Sbjct: 100 GGMRVGPQYQAVVPDF-DPAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKE--- 155
Query: 223 FARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCR 282
+ A+ L + ++I K+++ L P P
Sbjct: 156 -----------------------KHGYNMEQALGMLFWHKHNIEKSLADL-PNFTPF--- 188
Query: 283 DEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT-------DR 335
+EW+ + LFE+A +GK F IQQ LP KS+ S++++YY WK T DR
Sbjct: 189 --PDEWTVEDKVLFEQAFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRTKTSVMDR 245
Query: 336 YVQQKRLKAAEAESKLKQVYIPNYNKPNPNQISVNNVK 373
+ ++++ + E+E +L++ N NP I V+ K
Sbjct: 246 HARKQKREREESEDELEEA-----NGNNPIDIEVDQNK 278
Score = 33.1 bits (74), Expect = 0.92
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 235 QPSLHMSAAAASRDITLFHAMD----TLHKNIYDISKAISALVPQ--GG------PVLCR 282
Q + +A A+ T+ +D ++ + I +I + SAL + GG P + +
Sbjct: 318 QEDVEAVSANATAATTVLRQLDMELVSVKRQIQNIKQTNSALKEKLDGGIEPYRLPEVIQ 377
Query: 283 DEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRL 342
W+ E L +A+ KYG+DF I D + KS+ + ++ ++ R+ + L
Sbjct: 378 KCNARWTTEEQLLAVQAIRKYGRDFQAI-SDVIGNKSVVQVKNFFVNYRR--RFNIDEVL 434
Query: 343 KAAEAESKLKQVYIPNYNKP 362
+ EAE ++ P+ KP
Sbjct: 435 QEWEAEHGKEETNGPSNQKP 454
>gi|94721313 mesoderm induction early response 1, family member 3
[Homo sapiens]
Length = 549
Score = 58.5 bits (140), Expect = 2e-08
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 166 EIRVGNRYQADITDLLKEGEEDGRDQS-RLETQVWEAHNPLTDKQIDQFLVVARSVGTFA 224
EI +G +YQA+I L GE DG ++ E Q+ + + + ++ ++LV
Sbjct: 175 EIMIGLQYQAEIPPYL--GEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSE 232
Query: 225 RALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDE 284
+ +D +SA +RD A+ L K ++I +AI G
Sbjct: 233 KIMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQG 277
Query: 285 MEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
M W+ E FE AL +GKDF IQ++ + +++ + +YYMWK ++RY
Sbjct: 278 MTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 58.2 bits (139), Expect = 3e-08
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 35/252 (13%)
Query: 154 DPQQKTLLADK--GEIRVGNRYQADITDLL--KEGEEDGRDQSRLETQVWEAHNPLTDKQ 209
D ++ +L A+K EI VG ++QAD+++L + E+ ++ +L +W+ + L +++
Sbjct: 182 DTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQL---LWDP-SVLPERE 237
Query: 210 IDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAI 269
+++FL A A P L A + L+ L K +++ +A+
Sbjct: 238 VEEFLYRAVKRRWHEMA--------GPQLPEGEAVKDSEQALYE----LVKCNFNVEEAL 285
Query: 270 SALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYM 329
L + + RD + WS E FE +GK+F IQ + + +S+ +EYYY+
Sbjct: 286 RRL--RFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYL 343
Query: 330 WKTTDRY---VQQKRL--------KAAEAESKLKQVYIPNYNKPNPNQISVNNVKAG--V 376
WK ++RY QQ RL +A+ L +P P Q ++ ++
Sbjct: 344 WKKSERYDYFAQQTRLGRRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLS 403
Query: 377 VNGTGAPGQSPG 388
V+GT PG
Sbjct: 404 VDGTAGGLDEPG 415
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 57.4 bits (137), Expect = 5e-08
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
+RVG YQA I + G D+ VW ++ + D ++D+++ +A+ +
Sbjct: 59 MRVGAEYQARIPEF-DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGY--- 114
Query: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
+V Q A+ L + ++I K+++ L P P +
Sbjct: 115 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
EW+ + LFE+A +GK F IQQ LP K++ S+++YYY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
Length = 436
Score = 57.4 bits (137), Expect = 5e-08
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
+RVG YQA I + G D+ VW ++ + D ++D+++ +A+ +
Sbjct: 59 MRVGAEYQARIPEF-DPGATKYTDKDNGGMLVWSPYHSIPDARLDEYIAIAKEKHGY--- 114
Query: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
+V Q A+ L + ++I K+++ L P P +
Sbjct: 115 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
EW+ + LFE+A +GK F IQQ LP K++ S+++YYY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 57.4 bits (137), Expect = 5e-08
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
+RVG YQA I + G D+ VW ++ + D ++D+++ +A+ +
Sbjct: 59 MRVGAEYQARIPEF-DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGY--- 114
Query: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
+V Q A+ L + ++I K+++ L P P +
Sbjct: 115 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
EW+ + LFE+A +GK F IQQ LP K++ S+++YYY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 57.4 bits (137), Expect = 5e-08
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
+RVG YQA I + G D+ VW ++ + D ++D+++ +A+ +
Sbjct: 1 MRVGAEYQARIPEF-DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGY--- 56
Query: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
+V Q A+ L + ++I K+++ L P P +
Sbjct: 57 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 87
Query: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
EW+ + LFE+A +GK F IQQ LP K++ S+++YYY WK T
Sbjct: 88 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 133
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 196 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 255
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 256 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 298
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 116 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 175
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 176 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 218
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 273
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 152 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 211
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 212 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 254
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 255 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 309
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 196 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 255
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 256 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 298
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 179 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 238
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 239 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 281
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 282 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 336
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 232 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 291
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 292 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 334
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 335 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 389
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 196 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 255
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 256 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 298
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 179 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 238
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 239 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 281
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 282 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 336
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 232 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 291
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 292 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 334
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 335 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 389
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 55.5 bits (132), Expect = 2e-07
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 196 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 255
Query: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
A+ S ++ A+ L K +D +A+ L +
Sbjct: 256 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 298
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 53.9 bits (128), Expect = 5e-07
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
IRVG YQA I + E ++ VW ++ ++D ++D+++ +A+
Sbjct: 46 IRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKE------- 98
Query: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
+ A+ L + +D+ K+++ L +
Sbjct: 99 -------------------KHGYNIEQALGMLLWHKHDVEKSLADLAN------FTPFPD 133
Query: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
EW+ + LFE+A +GK F IQQ LP K + S+++YYY WK T
Sbjct: 134 EWTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKT 179
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 47.0 bits (110), Expect = 6e-05
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 286 EEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAA 345
++W++ E LF +AL Y KDF +Q+ + K++ +EYYY WK R ++ R + A
Sbjct: 888 DKWTSLERKLFNKALATYSKDFIFVQK-MVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLA 946
Query: 346 E 346
E
Sbjct: 947 E 947
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 44.7 bits (104), Expect = 3e-04
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 49/286 (17%)
Query: 126 CSV-TLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKEG 184
CS T + + + S L++ D F V + T ++ + I +G+R+QA+I +L +E
Sbjct: 1034 CSTSTQASPDQLISSMLDQVDGSFGICVV--KDDTKISIEPHINIGSRFQAEIPEL-QER 1090
Query: 185 EEDGRDQSRLETQVWEAHNPL-----TDKQIDQFLVVARSVGTFARALDCSSSVRQPSLH 239
G D+ + + VW+ + T ++ + VA CSS + +
Sbjct: 1091 SLAGTDE-HVASLVWKPWGDMMISSETQDRVTELCNVA-----------CSSVMPGGGTN 1138
Query: 240 MSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEM---------EEWSA 290
+ A + LH+ ++ A+ L+ +G P R + + W+
Sbjct: 1139 LELA-----------LHCLHEAQGNVQVALETLLLRG-PHKPRTHLLADYRYTGSDVWTP 1186
Query: 291 SEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY------VQQKRLKA 344
E LF++A + KDF I + + K++ +EYYY+WK ++ +KR+K
Sbjct: 1187 IEKRLFKKAFYAHKKDFYLIHK-MIQTKTVAQCVEYYYIWKKMIKFDCGRAPGLEKRVKR 1245
Query: 345 AEAESKLKQVYIPNYNKPNPNQISVNNVKAGVVNGTGAPGQSPGAG 390
E + + +P + P+ +K SP AG
Sbjct: 1246 EPEEVERTEEKVPCSPRERPSHHPTPKLKTKSYRRESILSSSPNAG 1291
>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 39.7 bits (91), Expect = 0.010
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 157 QKTLLADKGEIRVGNRYQADITDLLKEGEEDGRDQSRLET--QVWEAHNPLTDKQ--IDQ 212
+ T ++ + I VG+R+QA+I L+++ D + + Q WE +KQ ++
Sbjct: 713 EATPVSIEPRINVGSRFQAEIP-LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVED 771
Query: 213 FLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISAL 272
L A CSS A ++++ A+ LH++ DI + ++ L
Sbjct: 772 LLTAA-----------CSSI-------FPGAGTNQEL----ALHCLHESRGDILETLNKL 809
Query: 273 V------PQGGPVLCRDEM--EEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSII 324
+ P P+ ++W +E LF + + Y KDF +Q+ + K++ +
Sbjct: 810 LLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCV 868
Query: 325 EYYYMWK 331
E+YY +K
Sbjct: 869 EFYYTYK 875
>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 39.7 bits (91), Expect = 0.010
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 157 QKTLLADKGEIRVGNRYQADITDLLKEGEEDGRDQSRLET--QVWEAHNPLTDKQ--IDQ 212
+ T ++ + I VG+R+QA+I L+++ D + + Q WE +KQ ++
Sbjct: 713 EATPVSIEPRINVGSRFQAEIP-LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVED 771
Query: 213 FLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISAL 272
L A CSS A ++++ A+ LH++ DI + ++ L
Sbjct: 772 LLTAA-----------CSSI-------FPGAGTNQEL----ALHCLHESRGDILETLNKL 809
Query: 273 V------PQGGPVLCRDEM--EEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSII 324
+ P P+ ++W +E LF + + Y KDF +Q+ + K++ +
Sbjct: 810 LLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCV 868
Query: 325 EYYYMWK 331
E+YY +K
Sbjct: 869 EFYYTYK 875
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 34.7 bits (78), Expect = 0.32
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQ--- 338
R M WS E F E ++ K+F + FL K++ + YYY+ K + Y
Sbjct: 426 RQVMNMWSEQEKETFREKFMQHPKNF-GLIASFLERKTVAECVLYYYLTKKNENYKSLVR 484
Query: 339 ---QKRLKAAEAESKLKQVYIPNYNKPNP 364
++R K+ + + + +Q +P P
Sbjct: 485 RSYRRRGKSQQQQQQQQQQQQQQQQQPMP 513
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 34.7 bits (78), Expect = 0.32
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQ--- 338
R M WS E F E ++ K+F + FL K++ + YYY+ K + Y
Sbjct: 426 RQVMNMWSEQEKETFREKFMQHPKNF-GLIASFLERKTVAECVLYYYLTKKNENYKSLVR 484
Query: 339 ---QKRLKAAEAESKLKQVYIPNYNKPNP 364
++R K+ + + + +Q +P P
Sbjct: 485 RSYRRRGKSQQQQQQQQQQQQQQQQQPMP 513
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 34.7 bits (78), Expect = 0.32
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 639 SLPPVKR----RRMNWIDAPDDVFYMATEETRKIRKLLSSSETK----------RAARRP 684
S PP KR + D + F + + + IR L S + K +P
Sbjct: 387 SKPPKKRISLFSSLRLKDKSFESFLQESRQRKDIRDLFGSPKRKVLPEDSAQALEKLLQP 446
Query: 685 YKPIALRQSQALPPRPPPPAP 705
+K +LRQ+ PP PPPP P
Sbjct: 447 FKSTSLRQAAPPPPPPPPPPP 467
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,588,690
Number of Sequences: 37866
Number of extensions: 1520579
Number of successful extensions: 9206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 9018
Number of HSP's gapped (non-prelim): 182
length of query: 715
length of database: 18,247,518
effective HSP length: 109
effective length of query: 606
effective length of database: 14,120,124
effective search space: 8556795144
effective search space used: 8556795144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.