Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WDR64 Sequence: fasta or formatted (634aa) NCBI GI: 115495443
Description:

WD repeat domain 64

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         25           2
 C cysteine            1.6         10           1
 D aspartate           5.2         33           2
 E glutamate           6.9         44           2
 F phenylalanine       5.0         32           2
 G glycine             5.8         37           2
 H histidine           3.2         20           1
 I isoleucine          7.1         45           2
 K lysine              6.5         41           3
 L leucine             9.8         62           2
 M methionine          2.7         17           1
 N asparagine          3.8         24           1
 P proline             4.9         31           2
 Q glutamine           4.4         28           2
 R arginine            5.4         34           3
 S serine              7.6         48           2
 T threonine           4.4         28           1
 V valine              7.4         47           2
 W tryptophan          1.4          9           1
 Y tyrosine            3.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 64 
EFCAB8                0.075   EF-hand calcium binding domain 8 
WDR49                 0.066   WD repeat domain 49 
WDR69                 0.028   WD repeat domain 69 
PRPF19                0.027   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
PHIP                  0.027   pleckstrin homology domain interacting protein [Homo...
FBXW7                 0.025   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.025   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.025   F-box and WD repeat domain containing 7 isoform 2 [H...
BRWD1                 0.024   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.024   bromodomain and WD repeat domain containing 1 isofor...
FBXW11                0.021   F-box and WD repeat domain containing 11 isoform C [...
SNRNP40               0.021   WD repeat domain 57 (U5 snRNP specific) 
FBXW11                0.021   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.021   F-box and WD repeat domain containing 11 isoform B [...
WDR88                 0.021   PQQ repeat and WD repeat domain containing 
PLRG1                 0.020   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
BRWD3                 0.020   bromodomain and WD repeat domain containing 3 [Homo...
TEP1                  0.019   telomerase-associated protein 1 
BTRC                  0.019   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.019   beta-transducin repeat containing protein isoform 1 ...
KATNB1                0.018   katanin p80 subunit B 1 
STRN                  0.018   striatin, calmodulin binding protein 
PRPF4                 0.017   PRP4 pre-mRNA processing factor 4 homolog 
WDR5B                 0.017   WD repeat domain 5B 
NLE1                  0.017   Notchless gene homolog isoform b 
NLE1                  0.017   Notchless gene homolog isoform a 
WDR51A                0.017   WD repeat domain 51A isoform 3 
WDR51A                0.017   WD repeat domain 51A isoform 2 
WDR51A                0.017   WD repeat domain 51A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press