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Search of human proteins with 11545873
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11545873 secreted modular calcium-binding protein 1 isoform
2 [Homo sapiens]
(434 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11545873 secreted modular calcium-binding protein 1 isoform 2... 911 0.0
gi|78190498 secreted modular calcium-binding protein 1 isoform 1... 907 0.0
gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens] 480 e-135
gi|144953895 nidogen 2 precursor [Homo sapiens] 83 4e-16
gi|55770862 thyroglobulin [Homo sapiens] 75 1e-13
gi|115298674 nidogen 1 precursor [Homo sapiens] 65 2e-10
gi|12383051 transmembrane protein with EGF-like and two follista... 54 2e-07
gi|7662036 sparc/osteonectin, cwcv and kazal-like domains proteo... 53 5e-07
gi|4759164 sparc/osteonectin, cwcv and kazal-like domains proteo... 50 3e-06
gi|54873613 agrin [Homo sapiens] 48 2e-05
gi|93141003 testican 3 isoform 1 [Homo sapiens] 47 3e-05
gi|93141001 testican 3 isoform 2 [Homo sapiens] 47 3e-05
gi|4507171 secreted protein, acidic, cysteine-rich [Homo sapiens] 46 8e-05
gi|68448544 CD74 antigen isoform a [Homo sapiens] 46 8e-05
gi|5031701 follistatin-like 3 glycoprotein precursor [Homo sapiens] 45 1e-04
gi|5453652 follistatin isoform FST317 precursor [Homo sapiens] 45 1e-04
gi|7242222 follistatin isoform FST344 precursor [Homo sapiens] 45 1e-04
gi|190194423 SPARC-like 1 [Homo sapiens] 45 1e-04
gi|190341024 SPARC-like 1 [Homo sapiens] 45 1e-04
gi|29568105 transmembrane protein with EGF-like and two follista... 45 1e-04
gi|4504615 insulin-like growth factor binding protein 1 precurso... 44 4e-04
gi|62243068 insulin-like growth factor binding protein 3 isoform... 43 5e-04
gi|62243248 insulin-like growth factor binding protein 3 isoform... 43 5e-04
gi|62243290 insulin-like growth factor binding protein 4 precurs... 42 0.001
gi|55925576 insulin-like growth factor binding protein 2, 36kDa ... 40 0.004
gi|10834982 insulin-like growth factor binding protein 5 [Homo s... 39 0.007
gi|11321593 insulin-like growth factor binding protein 6 [Homo s... 39 0.009
gi|189242612 complement component 6 precursor [Homo sapiens] 39 0.009
gi|169636415 complement component 6 precursor [Homo sapiens] 39 0.009
gi|54792136 follistatin-like 4 [Homo sapiens] 39 0.009
>gi|11545873 secreted modular calcium-binding protein 1 isoform 2
[Homo sapiens]
Length = 434
Score = 911 bits (2355), Expect = 0.0
Identities = 434/434 (100%), Positives = 434/434 (100%)
Query: 1 MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG 60
MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG
Sbjct: 1 MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG 60
Query: 61 RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE 120
RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE
Sbjct: 61 RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE 120
Query: 121 DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK 180
DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK
Sbjct: 121 DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK 180
Query: 181 PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ 240
PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ
Sbjct: 181 PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ 240
Query: 241 NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT 300
NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT
Sbjct: 241 NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT 300
Query: 301 TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 360
TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE
Sbjct: 301 TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 360
Query: 361 ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE 420
ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE
Sbjct: 361 ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE 420
Query: 421 LKGCLGVSKEGRLV 434
LKGCLGVSKEGRLV
Sbjct: 421 LKGCLGVSKEGRLV 434
>gi|78190498 secreted modular calcium-binding protein 1 isoform 1
[Homo sapiens]
Length = 435
Score = 907 bits (2343), Expect = 0.0
Identities = 434/435 (99%), Positives = 434/435 (99%), Gaps = 1/435 (0%)
Query: 1 MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG 60
MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG
Sbjct: 1 MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDG 60
Query: 61 RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE 120
RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE
Sbjct: 61 RSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGE 120
Query: 121 DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK 180
DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK
Sbjct: 121 DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSK 180
Query: 181 PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ 240
PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ
Sbjct: 181 PTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQ 240
Query: 241 NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT 300
NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT
Sbjct: 241 NPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKT 300
Query: 301 TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 360
TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE
Sbjct: 301 TEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 360
Query: 361 ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE 420
ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE
Sbjct: 361 ERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPE 420
Query: 421 LKGCLGVSKE-GRLV 434
LKGCLGVSKE GRLV
Sbjct: 421 LKGCLGVSKEVGRLV 435
>gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens]
Length = 457
Score = 480 bits (1235), Expect = e-135
Identities = 227/406 (55%), Positives = 294/406 (72%), Gaps = 24/406 (5%)
Query: 38 DRDPQCNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRL 97
D+D C+L C+ + KP+CASDGR++ S CE+QRAKC+DP L + +RG CKD S+C
Sbjct: 35 DKDKDCSLDCAGSPQKPLCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDV--SRCVA 92
Query: 98 ERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPV 157
ER EQA+K + VF+PEC +DG+++QVQCH+YTGYCWCVTP+G+PISG++V +KTP
Sbjct: 93 ERKYTQEQARKEFQQVFIPECNDDGTYSQVQCHSYTGYCWCVTPNGRPISGTAVAHKTPR 152
Query: 158 CSGSVTDKPLSQGNSGR-----------KDDGSKPTPTMETQPVFDGDEITA--PTLWIK 204
C GSV +K + +G+ DD + P +ETQP D ++I + PTLW +
Sbjct: 153 CPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA--APALETQPQGDEEDIASRYPTLWTE 210
Query: 205 HLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQ 264
+ + +K N ++ SCDQE QSALEEA+Q + +VIPECA GGLYKPVQCH
Sbjct: 211 QVKSRQNKTNKNSVS------SCDQEHQSALEEAKQPKNDNVVIPECAHGGLYKPVQCHP 264
Query: 265 STGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKTTEADDPFKDRELPGCPEGKKMEFI 324
STGYCWCVLVDTGRP+PGTSTRY P C++ ARA +A D +K R+L GCP KK EF+
Sbjct: 265 STGYCWCVLVDTGRPIPGTSTRYEQPKCDNTARAHPAKARDLYKGRQLQGCPGAKKHEFL 324
Query: 325 TSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLEERVVHWYFSQLDSNSSNDINKREM 384
TS+LDAL+TDMV A + + + GR SEPDPSHTLEERVVHWYF LD NSS DI K+E+
Sbjct: 325 TSVLDALSTDMVHAASDPS-SSSGRLSEPDPSHTLEERVVHWYFKLLDKNSSGDIGKKEI 383
Query: 385 KPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGCLGVSKE 430
KPFKR+++KK+KPKKC ++F +YCD+N DK IS+ EL GCLGV+KE
Sbjct: 384 KPFKRFLRKKSKPKKCVKKFVEYCDVNNDKSISVQELMGCLGVAKE 429
>gi|144953895 nidogen 2 precursor [Homo sapiens]
Length = 1375
Score = 83.2 bits (204), Expect = 4e-16
Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 59/201 (29%)
Query: 95 CRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ-- 152
C ++ A Q P +P+C E G+F +QCH TG+CWCV PDG + G+
Sbjct: 940 CEQQQRHAQAQYAYPGARFHIPQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTPPG 999
Query: 153 NKTPVCSGSVTDKPLSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSK 212
+ P C G P PT PT+
Sbjct: 1000 STPPHC-------------------GPSPEPTQR-----------PPTI----------- 1018
Query: 213 LNNTNIRNSEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCV 272
C++ R++ LE PR+ +P+C G + P+QCH + +CWCV
Sbjct: 1019 --------------CERWRENLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCV 1064
Query: 273 LVDTGRPLPGT-STRYVMPSC 292
D GR + GT S P+C
Sbjct: 1065 DKD-GREVQGTRSQPGTTPAC 1084
Score = 52.8 bits (125), Expect = 6e-07
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 95 CRLERAQALEQ-AKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ- 152
C R LE P++ +VP+C + G F +QCH + +CWCV DG+ + G+ Q
Sbjct: 1019 CERWRENLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQGTRSQP 1078
Query: 153 NKTPVCSGSV 162
TP C +V
Sbjct: 1079 GTTPACIPTV 1088
>gi|55770862 thyroglobulin [Homo sapiens]
Length = 2768
Score = 75.1 bits (183), Expect = 1e-13
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 17/192 (8%)
Query: 114 FVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPV------CSGSVTDKPL 167
++P+C GS+ VQCH TG+CWCV G I GS + C S T L
Sbjct: 1027 YMPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIPGSLTARSLQIPQCPTTCEKSRTSGLL 1086
Query: 168 SQGNSGRKDDGSKPTPTMETQPVFDGD----EITAPTLWIKHLVIKDSKLNNTNIRNSEK 223
S R + P + G+ + + W + ++ +S +
Sbjct: 1087 SSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVDPASGEELRPGSS--SSAQ 1144
Query: 224 VYSCDQERQSALEEAQQNPREGIVIPEC-APGGLYKPVQCHQSTGYCWCVLVDTGRPLPG 282
S +S + + +P +P C A G + PVQC Q+ G CWCV+ D+G +PG
Sbjct: 1145 CPSLCNVLKSGVLSRRVSPG---YVPACRAEDGGFSPVQCDQAQGSCWCVM-DSGEEVPG 1200
Query: 283 TSTRYVMPSCES 294
T P+CES
Sbjct: 1201 TRVTGGQPACES 1212
Score = 59.3 bits (142), Expect = 7e-09
Identities = 62/234 (26%), Positives = 89/234 (38%), Gaps = 39/234 (16%)
Query: 119 GEDGSFTQVQCHTYTGYCWCVTPDGKPISGS-SVQNKTPVCSGSVTDKPLSQGNSGRKDD 177
G F+ H CWCV G+ + G S +K P C GS + L R+ +
Sbjct: 881 GSYSDFSTPLAHFDLRNCWCVDEAGQELEGMRSEPSKLPTCPGSCEEAKLRVLQFIRETE 940
Query: 178 ------GSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVYSCDQER 231
S P E+ V G + L + L +R S+ Y+
Sbjct: 941 EIVSASNSSRFPLGESFLVAKGIRLRNEDLGLPPLFPPREAFAEQFLRGSD--YAIRLAA 998
Query: 232 QSALEEAQQNP-------------REGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGR 278
QS L Q+ R G +P+C G ++PVQCH TG+CWCV + G
Sbjct: 999 QSTLSFYQRRRFSPDDSAGASALLRSGPYMPQCDAFGSWEPVQCHAGTGHCWCV-DEKGG 1057
Query: 279 PLPG--TSTRYVMPSC-------------ESDARAKTTEADDPFKDRELPGCPE 317
+PG T+ +P C S +A++ E P KD +P C E
Sbjct: 1058 FIPGSLTARSLQIPQCPTTCEKSRTSGLLSSWKQARSQENPSP-KDLFVPACLE 1110
Score = 53.5 bits (127), Expect = 4e-07
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 54 PICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQ--SKCRLERAQALEQAKKPQE 111
P C G C DP G R + Q S C + ++ L + P
Sbjct: 1106 PACLETGEYARLQASGAGTWCVDPASGEELRPGSSSSAQCPSLCNVLKSGVLSRRVSPG- 1164
Query: 112 AVFVPEC-GEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVC 158
+VP C EDG F+ VQC G CWCV G+ + G+ V P C
Sbjct: 1165 --YVPACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRVTGGQPAC 1210
Score = 51.6 bits (122), Expect = 1e-06
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 97 LERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTP 156
+E + + ++ E +FVP C +GS+ VQC ++G CWCV GK + GS V+ P
Sbjct: 599 METVLSSQTCEQTPERLFVPSCTTEGSYEDVQC--FSGECWCVNSWGKELPGSRVRGGQP 656
Query: 157 VC 158
C
Sbjct: 657 RC 658
Score = 49.7 bits (117), Expect = 5e-06
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 95 CRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNK 154
C L+R A + +A +VP+C EDGSF VQC CWCV +G + GS +
Sbjct: 34 CELQRETAFLK-----QADYVPQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGR 88
Query: 155 TPVC 158
C
Sbjct: 89 PVAC 92
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 93 SKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ 152
+KC +ER A +VP C +G + VQC T G CWCV GK + G+ Q
Sbjct: 299 TKCEVERFTATSFGHP-----YVPSCRRNGDYQAVQCQT-EGPCWCVDAQGKEMHGTRQQ 352
Query: 153 NKTPVCS 159
+ P C+
Sbjct: 353 GEPPSCA 359
Score = 46.6 bits (109), Expect = 4e-05
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 54 PICASDGRSYESMCEYQRAKC------RDPTLGVVHRGRCKDAGQSKCRLERAQALEQAK 107
P CA DG C+ C LG GR A S C+L++ Q L
Sbjct: 50 PQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGR-PVACLSFCQLQKQQILLSGY 108
Query: 108 -KPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGS 161
+ ++P+C + G + VQC CWCV +G + G+ + C S
Sbjct: 109 INSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGTRQLGRPKRCPRS 163
Score = 44.3 bits (103), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 236 EEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESD 295
+ +Q P E + +P C G Y+ VQC +G CWCV G+ LPG+ R P C +D
Sbjct: 606 QTCEQTP-ERLFVPSCTTEGSYEDVQCF--SGECWCV-NSWGKELPGSRVRGGQPRCPTD 661
Score = 42.7 bits (99), Expect = 6e-04
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 47 CSRTQPK---PICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLE----- 98
C +T + P C ++G + C C + + G G GQ +C +
Sbjct: 608 CEQTPERLFVPSCTTEGSYEDVQCFSGECWCVN-SWGKELPGSRVRGGQPRCPTDCEKQR 666
Query: 99 -RAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGS 149
R Q+L ++ +FVP C +G F VQC + C+CV +G+ I G+
Sbjct: 667 ARMQSLMGSQPAGSTLFVPACTSEGHFLPVQC--FNSECYCVDAEGQAIPGT 716
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 227 CDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTR 286
C ++Q L N + +P+C G Y PVQC CWCV + G + GT
Sbjct: 96 CQLQKQQILLSGYINSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAE-GMEVYGTRQL 154
Query: 287 YVMPSCESDARAKTTEADDPFKDRELPGC-PEGKKMEFITSLLDALTTDMV 336
C + D+ P C EG+ M ++ TTDM+
Sbjct: 155 GRPKRCPRSCEIRNRRLLHGVGDKSPPQCSAEGEFMPVQCKFVN--TTDMM 203
Score = 40.8 bits (94), Expect = 0.002
Identities = 67/276 (24%), Positives = 102/276 (36%), Gaps = 54/276 (19%)
Query: 45 LHCSRTQPKPICASDGRSYESMCEYQRAKC------RDPTLGVVHRGRCKDAGQSKCRLE 98
++ + T P C G C+ Q+ +C G GR K +S C +
Sbjct: 109 INSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGTRQLGRPKRCPRS-CEIR 167
Query: 99 RAQALEQA--KKPQEAVFVPECGEDGSFTQVQC--------------HTYTGYCWCVTPD 142
+ L K P P+C +G F VQC H+Y + PD
Sbjct: 168 NRRLLHGVGDKSP------PQCSAEGEFMPVQCKFVNTTDMMIFDLVHSYNRF-----PD 216
Query: 143 GKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSKPTPTMETQPVFDGDEI----TA 198
++ SS Q + P SG SQG + G + +F G ++ T
Sbjct: 217 AF-VTFSSFQRRFPEVSGYCHCAD-SQGRE-LAETGLELLLDEIYDTIFAGLDLPSTFTE 273
Query: 199 PTLW--IKHLVIKDSKLNNTNIRNSEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGL 256
TL+ ++ + + + R K C+ ER +A +P C G
Sbjct: 274 TTLYRILQRRFLAVQSVISGRFRCPTK---CEVERFTATSFGHP------YVPSCRRNGD 324
Query: 257 YKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSC 292
Y+ VQC Q+ G CWCV G+ + GT + PSC
Sbjct: 325 YQAVQC-QTEGPCWCVDAQ-GKEMHGTRQQGEPPSC 358
Score = 35.8 bits (81), Expect = 0.078
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 212 KLNNTNIRNSEKVYSCDQERQSALEEA---QQNPREGIVIPECAPGGLYKPVQCHQSTGY 268
+L + +R + D E+Q A ++ Q + +P C G + PVQC S
Sbjct: 645 ELPGSRVRGGQPRCPTDCEKQRARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSE-- 702
Query: 269 CWCVLVDTGRPLPGTSTRYVMP-SCESDARAKTTEA 303
C+CV + G+ +PGT + P C + + ++ +A
Sbjct: 703 CYCVDAE-GQAIPGTRSAIGKPKKCPTPCQLQSEQA 737
Score = 35.0 bits (79), Expect = 0.13
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 220 NSEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCV 272
+++ + C+ +R++A ++ +P+CA G ++ VQC CWCV
Sbjct: 27 DAQPLRPCELQRETAFL------KQADYVPQCAEDGSFQTVQCQNDGRSCWCV 73
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 16/92 (17%)
Query: 54 PICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSK-----CRLERAQAL---EQ 105
P C S+G C C D G G G+ K C+L+ QA Q
Sbjct: 685 PACTSEGHFLPVQCFNSECYCVDAE-GQAIPGTRSAIGKPKKCPTPCQLQSEQAFLRTVQ 743
Query: 106 AKKPQEAV-------FVPECGEDGSFTQVQCH 130
A ++ ++P+C DG + QVQC+
Sbjct: 744 ALLSNSSMLPTLSDTYIPQCSTDGQWRQVQCN 775
Score = 29.3 bits (64), Expect = 7.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 101 QALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTP----DGKPISGSSVQ 152
QA Q + +FVP C E G + ++Q WCV P + +P S SS Q
Sbjct: 1091 QARSQENPSPKDLFVPACLETGEYARLQAS--GAGTWCVDPASGEELRPGSSSSAQ 1144
>gi|115298674 nidogen 1 precursor [Homo sapiens]
Length = 1247
Score = 64.7 bits (156), Expect = 2e-10
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 48 SRTQPKPICASDGRSYESMCE--YQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQ 105
SR P C + S+ C+ YQ R G V + RC+ + + L A A +
Sbjct: 809 SRCHPDAFCYNTPGSFTCQCKPGYQGDGFRCVP-GEVEKTRCQH--EREHILGAAGATDP 865
Query: 106 AKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ-NKTPVCSGSVTD 164
+ +FVPEC G + QCH TGYCWCV DG+ + G+ + TP C +V
Sbjct: 866 QRPIPPGLFVPECDAHGHYAPTQCHGSTGYCWCVDRDGREVEGTRTRPGMTPPCLSTVA- 924
Query: 165 KPLSQG 170
P+ QG
Sbjct: 925 PPIHQG 930
Score = 59.7 bits (143), Expect = 5e-09
Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 227 CDQERQSALEEA-----QQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLP 281
C ER+ L A Q+ G+ +PEC G Y P QCH STGYCWCV D GR +
Sbjct: 849 CQHEREHILGAAGATDPQRPIPPGLFVPECDAHGHYAPTQCHGSTGYCWCVDRD-GREVE 907
Query: 282 GTSTRYVM-PSCES 294
GT TR M P C S
Sbjct: 908 GTRTRPGMTPPCLS 921
>gi|12383051 transmembrane protein with EGF-like and two
follistatin-like domains 2 [Homo sapiens]
Length = 374
Score = 54.3 bits (129), Expect = 2e-07
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKC-RDPTLGVVHRGRCKDAGQSKCRLE--- 98
CN+ CS+T P+CASDG+SY++ C+ + A C + + V+ GRC+D + + E
Sbjct: 182 CNIDCSQTNFNPLCASDGKSYDNACQIKEASCQKQEKIEVMSLGRCQDNTTTTTKSEDGH 241
Query: 99 --RAQALEQAKKPQEA 112
R E A K +E+
Sbjct: 242 YARTDYAENANKLEES 257
Score = 35.8 bits (81), Expect = 0.078
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPT-LGVVHRGRC-KDAGQSKCRLERA 100
C C+ P+C S+G SY++ C ++A C+ + + VV G C DAG
Sbjct: 91 CQFKCNNDYV-PVCGSNGESYQNECYLRQAACKQQSEILVVSEGSCATDAGSGSGDGVHE 149
Query: 101 QALEQAKKPQEAV----FVPECGEDGSFTQVQCH---TYTGYCWCVTPDGK 144
+ E ++K F EC ED C+ + T + DGK
Sbjct: 150 GSGETSQKETSTCDICQFGAECDEDAEDVWCVCNIDCSQTNFNPLCASDGK 200
>gi|7662036 sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 2 isoform 2 [Homo sapiens]
Length = 424
Score = 53.1 bits (126), Expect = 5e-07
Identities = 70/281 (24%), Positives = 111/281 (39%), Gaps = 36/281 (12%)
Query: 27 HRTTGPRF-LISDRDPQCNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRG 85
HR P L ++D C C Q +C SDG +Y S+C+ ++ C V
Sbjct: 119 HRIKQPTVKLHGNKDSICK-PCHMAQLASVCGSDGHTYSSVCKLEQQACLSSKQLAV--- 174
Query: 86 RCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKP 145
RC+ G C E+A KP+ G+D + + + + + +
Sbjct: 175 RCE--GPCPCPTEQAATSTADGKPETCT-----GQDLADLGDRLRDW----FQLLHENSK 223
Query: 146 ISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSKPTPTMETQPVF-DGDEITAPTLWIK 204
+GS+ P S DK L G S + G + + +F D E+ A L
Sbjct: 224 QNGSASSVAGP---ASGLDKSL--GASCKDSIGWMFSKLDTSADLFLDQTELAAINLDKY 278
Query: 205 HLVIKD-----SKLNNTNIRNSEKVYSCDQERQSALEEAQQ-------NPREGIVIPECA 252
+ I+ + + +E + +E+ L E ++ + GI IP C
Sbjct: 279 EVCIRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERIQIQEAAKKKPGIFIPSCD 338
Query: 253 PGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCE 293
G Y+ +QC QS+G CWCV G L GT T + P C+
Sbjct: 339 EDGYYRKMQCDQSSGDCWCV-DQLGLELTGTRT-HGSPDCD 377
Score = 52.8 bits (125), Expect = 6e-07
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 97 LERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTP 156
LER Q E AKK + +F+P C EDG + ++QC +G CWCV G ++G+ +P
Sbjct: 317 LERIQIQEAAKK-KPGIFIPSCDEDGYYRKMQCDQSSGDCWCVDQLGLELTGTRTHG-SP 374
Query: 157 VCSGSVTDKPLSQGNSGRKDDGSKPT 182
C V G +D+ K T
Sbjct: 375 DCDDIVGFSGDFGSGVGWEDEEEKET 400
Score = 33.9 bits (76), Expect = 0.30
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 17/148 (11%)
Query: 284 STRYVMPSCESDARAKTTEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAA 343
S++ + CE T +A D G PE + + L D L D Q ++ +
Sbjct: 168 SSKQLAVRCEGPCPCPTEQAATSTAD----GKPETCTGQDLADLGDRLR-DWFQLLHENS 222
Query: 344 PTGGGRFSEPDPSHTLEERV-------VHWYFSQLDSNSSNDINKREMKPFKRYVKKKAK 396
G S P+ L++ + + W FS+LD+++ +++ E+ K
Sbjct: 223 KQNGSASSVAGPASGLDKSLGASCKDSIGWMFSKLDTSADLFLDQTELAAINL-----DK 277
Query: 397 PKKCARRFTDYCDLNKDKVISLPELKGC 424
+ C R F + CD KD +S E C
Sbjct: 278 YEVCIRPFFNSCDTYKDGRVSTAEWCFC 305
>gi|4759164 sparc/osteonectin, cwcv and kazal-like domains
proteoglycan 1 precursor [Homo sapiens]
Length = 439
Score = 50.4 bits (119), Expect = 3e-06
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 97 LERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTP 156
+ R Q L + K A F+P C E+G + QCH TG CWCV G ++GS Q
Sbjct: 317 MNRIQKLSKGKSLLGA-FIPRCNEEGYYKATQCHGSTGQCWCVDKYGNELAGSRKQGAVS 375
Query: 157 VCSGSVTDKPLSQGNS 172
T G S
Sbjct: 376 CEEEQETSGDFGSGGS 391
Score = 48.5 bits (114), Expect = 1e-05
Identities = 77/307 (25%), Positives = 106/307 (34%), Gaps = 67/307 (21%)
Query: 47 CSRTQPKPICASDGRSYESMCEYQRAKCRD-PTLGVVHRGRCK---DAGQSKCRLERAQA 102
C Q +C SDG SY S C+ + C +L + G C + K + ER+
Sbjct: 139 CPVAQSAMVCGSDGHSYTSKCKLEFHACSTGKSLATLCDGPCPCLPEPEPPKHKAERSAC 198
Query: 103 LEQAKKPQEAVFVPECG---EDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNK----- 154
++ + + G ED + KP S ++ Q +
Sbjct: 199 TDKELRNLASRLKDWFGALHEDANRVI-----------------KPTSSNTAQGRFDTSI 241
Query: 155 TPVCSGSVTDKPLSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPTL-----WIKHLVIK 209
P+C S+ G K D M + D EI A L IK L
Sbjct: 242 LPICKDSL-------GWMFNKLD-------MNYDLLLDPSEINAIYLDKYEPCIKPLFNS 287
Query: 210 DSKLNNTNIRNSEKVYS--------CDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQ 261
+ + N+E Y C E + ++ G IP C G YK Q
Sbjct: 288 CDSFKDGKLSNNEWCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQ 347
Query: 262 CHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESD--------ARAKTTEADDPFKDREL- 312
CH STG CWCV G L G S + SCE + + DD +REL
Sbjct: 348 CHGSTGQCWCV-DKYGNELAG-SRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEYERELG 405
Query: 313 PGCPEGK 319
P EGK
Sbjct: 406 PKDKEGK 412
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 53 KPICASDGRSYESMCEYQRAKCRDP-TLGVVHRGRCKDAGQ----------SKCRLERAQ 101
+P+CA DGR+Y+S C Q+A+CR + H+G C A + C ++ Q
Sbjct: 426 RPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCAVKNGQ 485
Query: 102 ALEQAKKPQEAVFVPECGEDG 122
A + + +++ P CG DG
Sbjct: 486 AACECLQACSSLYDPVCGSDG 506
Score = 43.5 bits (101), Expect = 4e-04
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 25/105 (23%)
Query: 42 QCNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPTLG----VVHRGRCKDAGQSK--- 94
+C CS P+C SDG +Y S CE + C TLG V +G C GQ +
Sbjct: 489 ECLQACSSLYD-PVCGSDGVTYGSACELEATAC---TLGREIQVARKGPCDRCGQCRFGA 544
Query: 95 -CRLERAQALEQAKKPQEAVFV--PECGEDGSFTQVQCHTYTGYC 136
C E + + P E V + P CG DG HTY C
Sbjct: 545 LCEAETGRCV----CPSECVALAQPVCGSDG-------HTYPSEC 578
Score = 40.0 bits (92), Expect = 0.004
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPT-LGVVHRGRCKDAGQSKCRLERAQ 101
C+ C P+C SDG +Y + CE ++A+C L V +G C+ G + L
Sbjct: 705 CDFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACR--GPTFAPLPPVA 762
Query: 102 ALEQAKKP----QEAVFVP------------ECGEDGSFTQVQCHTYTGYCWC 138
L A+ P Q+ + +C GS+ C TG C C
Sbjct: 763 PLHCAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGT-CDPATGQCSC 814
Score = 38.9 bits (89), Expect = 0.009
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 20/114 (17%)
Query: 47 CSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQA 106
C P P+C SDG +Y S CE + A C T + R Q++C + +
Sbjct: 623 CEHPPPGPVCGSDGVTYGSACELREAACLQQT--QIEEARAGPCEQAECGSGGSGS---- 676
Query: 107 KKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQN--KTPVC 158
GEDG Q C G + DG + S Q+ +PVC
Sbjct: 677 ------------GEDGDCEQELCRQRGGIWDEDSEDGPCVCDFSCQSVPGSPVC 718
Score = 35.8 bits (81), Expect = 0.078
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 19/95 (20%)
Query: 54 PICASDGRSYESMCEYQRA-KCRDPTLGVVHRGRC--KDAGQSKCRLERAQALEQAKKPQ 110
P+C DG +YE+ C R+ R L V G+C +D CR A L + +P+
Sbjct: 355 PVCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRF-NAVCLSRRGRPR 413
Query: 111 --------EAVFVPECGEDGSFTQVQCHTYTGYCW 137
+ + P C +DG TY CW
Sbjct: 414 CSCDRVTCDGAYRPVCAQDG-------RTYDSDCW 441
Score = 34.3 bits (77), Expect = 0.23
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 54 PICASDGRSYESMCEYQRAKC-RDPTLGVVHRGRC 87
P+C SD +Y + CE QRA+C + + ++ RG C
Sbjct: 208 PVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPC 242
Score = 31.6 bits (70), Expect = 1.5
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKC-RDPTLGVVHRGRC-------KDAGQSK 94
C C +C SDG Y C+ R C R + G C D +S
Sbjct: 272 CPATCRGAPEGTVCGSDGADYPGECQLLRRACARQENVFKKFDGPCDPCQGALPDPSRS- 330
Query: 95 CRLE-RAQALEQAKKPQE--AVFVPECGEDGSFTQVQC 129
CR+ R + E +P+ A P CG+DG + C
Sbjct: 331 CRVNPRTRRPEMLLRPESCPARQAPVCGDDGVTYENDC 368
Score = 29.3 bits (64), Expect = 7.3
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 45 LHCSRTQPKPICASDGRSYESMCEYQRAKCRDP-TLGVVHRGRCKDA 90
L C +C SDG +Y + C+ + CR + + G C++A
Sbjct: 926 LTCPEANATKVCGSDGVTYGNECQLKTIACRQGLQISIQSLGPCQEA 972
>gi|93141003 testican 3 isoform 1 [Homo sapiens]
Length = 433
Score = 47.4 bits (111), Expect = 3e-05
Identities = 59/256 (23%), Positives = 89/256 (34%), Gaps = 65/256 (25%)
Query: 47 CSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQA 106
C P P+C SDG +Y C+ + C LG +C+ G C ++ + +
Sbjct: 139 CPVVYPSPVCGSDGHTYSFQCKLEYQAC---VLGKQISVKCE--GHCPCPSDKPTSTSRN 193
Query: 107 KKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKP 166
K D F +V + K + S QNK K
Sbjct: 194 VK--------RACSDLEFREVANRLRDWF--------KALHESGSQNKKT--------KT 229
Query: 167 LSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVY- 225
L + R D P +F+ + L++ S+L + + +E+
Sbjct: 230 LLRPERSRFDTSILPICKDSLGWMFNRLDTNYD------LLLDQSELRSIYLDKNEQCTK 283
Query: 226 ----SCDQERQSALE--------EAQQNP-----------REGI------VIPECAPGGL 256
SCD + S + + QQ+P R+G+ IP C G
Sbjct: 284 AFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGY 343
Query: 257 YKPVQCHQSTGYCWCV 272
YKP QCH S G CWCV
Sbjct: 344 YKPTQCHGSVGQCWCV 359
Score = 44.3 bits (103), Expect = 2e-04
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 114 FVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSV 151
++P C EDG + QCH G CWCV G + GS +
Sbjct: 334 YIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRI 371
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 366 WYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGC 424
W F++LD+N +++ E++ Y+ K ++C + F + CD KD +IS E C
Sbjct: 252 WMFNRLDTNYDLLLDQSELRSI--YLDKN---EQCTKAFFNSCDTYKDSLISNNEWCYC 305
>gi|93141001 testican 3 isoform 2 [Homo sapiens]
Length = 436
Score = 47.4 bits (111), Expect = 3e-05
Identities = 59/256 (23%), Positives = 89/256 (34%), Gaps = 65/256 (25%)
Query: 47 CSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQALEQA 106
C P P+C SDG +Y C+ + C LG +C+ G C ++ + +
Sbjct: 142 CPVVYPSPVCGSDGHTYSFQCKLEYQAC---VLGKQISVKCE--GHCPCPSDKPTSTSRN 196
Query: 107 KKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKP 166
K D F +V + K + S QNK K
Sbjct: 197 VK--------RACSDLEFREVANRLRDWF--------KALHESGSQNKKT--------KT 232
Query: 167 LSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNIRNSEKVY- 225
L + R D P +F+ + L++ S+L + + +E+
Sbjct: 233 LLRPERSRFDTSILPICKDSLGWMFNRLDTNYD------LLLDQSELRSIYLDKNEQCTK 286
Query: 226 ----SCDQERQSALE--------EAQQNP-----------REGI------VIPECAPGGL 256
SCD + S + + QQ+P R+G+ IP C G
Sbjct: 287 AFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGY 346
Query: 257 YKPVQCHQSTGYCWCV 272
YKP QCH S G CWCV
Sbjct: 347 YKPTQCHGSVGQCWCV 362
Score = 44.3 bits (103), Expect = 2e-04
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 114 FVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSV 151
++P C EDG + QCH G CWCV G + GS +
Sbjct: 337 YIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRI 374
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 366 WYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGC 424
W F++LD+N +++ E++ Y+ K ++C + F + CD KD +IS E C
Sbjct: 255 WMFNRLDTNYDLLLDQSELRSI--YLDKN---EQCTKAFFNSCDTYKDSLISNNEWCYC 308
>gi|4507171 secreted protein, acidic, cysteine-rich [Homo sapiens]
Length = 303
Score = 45.8 bits (107), Expect = 8e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 364 VHWYFSQLDSNSSND-INKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELK 422
VHW F QLD + + ++ E+ P + + + C RF + CDL+ DK I+L E
Sbjct: 231 VHWQFGQLDQHPIDGYLSHTELAPLRAPL---IPMEHCTTRFFETCDLDNDKYIALDEWA 287
Query: 423 GCLGVSKE 430
GC G+ ++
Sbjct: 288 GCFGIKQK 295
>gi|68448544 CD74 antigen isoform a [Homo sapiens]
Length = 296
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 114 FVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPLSQGNSG 173
F P+C E+G++ +QC+ GYCWCV P+G + + + CS S+ + S G
Sbjct: 228 FRPKCDENGNYLPLQCYGSIGYCWCVFPNGTEVPNTRSRGHHN-CSESLELEDPSSGLGV 286
Query: 174 RKDD 177
K D
Sbjct: 287 TKQD 290
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 249 PECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTR 286
P+C G Y P+QC+ S GYCWCV G +P T +R
Sbjct: 230 PKCDENGNYLPLQCYGSIGYCWCVF-PNGTEVPNTRSR 266
>gi|5031701 follistatin-like 3 glycoprotein precursor [Homo sapiens]
Length = 263
Score = 45.4 bits (106), Expect = 1e-04
Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 34/166 (20%)
Query: 19 VQLSPARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDGRSYESMCEYQRAKCR-DP 77
V+ P + R G R + P C+ +R Q +C SDG +Y CE + A+CR P
Sbjct: 102 VECGPGKACRMLGGRPRC-ECAPDCSGLPARLQ---VCGSDGATYRDECELRAARCRGHP 157
Query: 78 TLGVVHRGRCK-----------------DAGQSKCRLERAQALEQAKKPQEAVFVPECGE 120
L V++RGRC+ G + C + RA P + + CG
Sbjct: 158 DLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQEL----CGN 213
Query: 121 DGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKP 166
+ CH C+ G +GS C+G+ + P
Sbjct: 214 NNVTYISSCHMRQATCFLGRSIGVRHAGS--------CAGTPEEPP 251
>gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]
Length = 317
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 24/132 (18%)
Query: 43 CNLHCSR-TQPKPICASDGRSYESMCEYQRAKCRD-PTLGVVHRGRCKDA-------GQS 93
C CS T P+C DG++Y + C +A+C++ P L V ++GRCK G S
Sbjct: 118 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSS 177
Query: 94 KCRLERAQ----------ALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDG 143
C +++ E A Q CG DG CH C G
Sbjct: 178 TCVVDQTNNAYCVTCNRICPEPASSEQYL-----CGNDGVTYSSACHLRKATCLLGRSIG 232
Query: 144 KPISGSSVQNKT 155
G ++ K+
Sbjct: 233 LAYEGKCIKAKS 244
Score = 32.3 bits (72), Expect = 0.86
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 53 KPICASDGRSYESMCEYQRAKCRDPT-LGVVHRGRC 87
+P+CASD +Y S C + A C L V H G C
Sbjct: 281 EPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316
>gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]
Length = 344
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 24/132 (18%)
Query: 43 CNLHCSR-TQPKPICASDGRSYESMCEYQRAKCRD-PTLGVVHRGRCKDA-------GQS 93
C CS T P+C DG++Y + C +A+C++ P L V ++GRCK G S
Sbjct: 118 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSS 177
Query: 94 KCRLERAQ----------ALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDG 143
C +++ E A Q CG DG CH C G
Sbjct: 178 TCVVDQTNNAYCVTCNRICPEPASSEQYL-----CGNDGVTYSSACHLRKATCLLGRSIG 232
Query: 144 KPISGSSVQNKT 155
G ++ K+
Sbjct: 233 LAYEGKCIKAKS 244
Score = 32.7 bits (73), Expect = 0.66
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 53 KPICASDGRSYESMCEYQRAKCRDPT-LGVVHRGRCKDAGQ 92
+P+CASD +Y S C + A C L V H G C +
Sbjct: 281 EPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCNSISE 321
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 364 VHWYFSQLDSNSSNDI-NKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELK 422
VHW FS+LD + + + E+ P + + + C RF + CD NKDK I+L E
Sbjct: 592 VHWQFSELDQHPMDRVLTHSELAPLRASL---VPMEHCITRFFEECDPNKDKHITLKEWG 648
Query: 423 GCLGVSKE 430
C G+ +E
Sbjct: 649 HCFGIKEE 656
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 364 VHWYFSQLDSNSSNDI-NKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELK 422
VHW FS+LD + + + E+ P + + + C RF + CD NKDK I+L E
Sbjct: 592 VHWQFSELDQHPMDRVLTHSELAPLRASL---VPMEHCITRFFEECDPNKDKHITLKEWG 648
Query: 423 GCLGVSKE 430
C G+ +E
Sbjct: 649 HCFGIKEE 656
>gi|29568105 transmembrane protein with EGF-like and two
follistatin-like domains 1 [Homo sapiens]
Length = 380
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKC-RDPTLGVVHRGRCKDA------GQSKC 95
CN+ CS P+CASDG SY + C + A C + + + H G C D G+
Sbjct: 190 CNIDCSGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHCTDTDDTSLLGKKDD 249
Query: 96 RLERAQALEQAKKPQEAVFV 115
L+ ++ A +E V++
Sbjct: 250 GLQYRPDVKDASDQREDVYI 269
Score = 40.4 bits (93), Expect = 0.003
Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 23/179 (12%)
Query: 43 CNLHCSRTQPKPICASDGRSYESMCEYQRAKCR-DPTLGVVHRGRC-----KDAGQSKCR 96
C C T P+C S+G +Y++ C +RA C+ + V+ RG C +G+ +
Sbjct: 99 CQFQC-HTNYIPVCGSNGDTYQNECFLRRAACKHQKEITVIARGPCYSDNGSGSGEGEEE 157
Query: 97 LERAQALEQAKKPQEAVFVPECGED----GSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ 152
A+ + K + EC ED G + C Y+ C + + V+
Sbjct: 158 GSGAEVHRKHSKCGPCKYKAECDEDAENVGCVCNIDCSGYSFNPVCASDGSSYNNPCFVR 217
Query: 153 NKTPVCSGSVTDKPLSQGNS-------GRKDDGSKPTPTM-----ETQPVFDGDEITAP 199
+ + + + L G+KDDG + P + + + V+ G+ + P
Sbjct: 218 EASCIKQEQIDIRHLGHCTDTDDTSLLGKKDDGLQYRPDVKDASDQREDVYIGNHMPCP 276
>gi|4504615 insulin-like growth factor binding protein 1 precursor
[Homo sapiens]
Length = 259
Score = 43.5 bits (101), Expect = 4e-04
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 95 CRLERAQALEQAKKPQEA-------VFVPECGEDGSFTQVQCHT----YTGYCWCVTP-D 142
CR+E + +E K QE ++P C ++G + QC T G CWCV P +
Sbjct: 176 CRIELYRVVESLAKAQETSGEEISKFYLPNCNKNGFYHSRQCETSMDGEAGLCWCVYPWN 235
Query: 143 GKPISGSSVQNKTPVC 158
GK I GS P C
Sbjct: 236 GKRIPGSPEIRGDPNC 251
Score = 39.7 bits (91), Expect = 0.005
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 188 QPVFDGDEITAPT------LWIKHLVIKDSK-LNNTNIRNSEKVYSCDQERQ-SALEEAQ 239
+ + D + AP+ LW SK L+ TNI+ ++ + R +L +AQ
Sbjct: 132 EELLDNFHLMAPSEEDHSILWDAISTYDGSKALHVTNIKKWKEPCRIELYRVVESLAKAQ 191
Query: 240 QNPREGI---VIPECAPGGLYKPVQCHQS----TGYCWCVLVDTGRPLPGTSTRYVMPSC 292
+ E I +P C G Y QC S G CWCV G+ +PG+ P+C
Sbjct: 192 ETSGEEISKFYLPNCNKNGFYHSRQCETSMDGEAGLCWCVYPWNGKRIPGSPEIRGDPNC 251
Query: 293 E 293
+
Sbjct: 252 Q 252
>gi|62243068 insulin-like growth factor binding protein 3 isoform b
precursor [Homo sapiens]
Length = 291
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 227 CDQERQSALEEAQ----QNPREGIVIPECAPGGLYKPVQCHQS----TGYCWCVLVDTGR 278
C +E + L + +PR G+ IP C G YK QC S G+CWCV G+
Sbjct: 213 CRREMEDTLNHLKFLNVLSPR-GVHIPNCDKKGFYKKKQCRPSKGRKRGFCWCV-DKYGQ 270
Query: 279 PLPGTSTR 286
PLPG +T+
Sbjct: 271 PLPGYTTK 278
Score = 40.0 bits (92), Expect = 0.004
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 95 CRLERAQALEQAK----KPQEAVFVPECGEDGSFTQVQCHTYTG----YCWCVTPDGKPI 146
CR E L K V +P C + G + + QC G +CWCV G+P+
Sbjct: 213 CRREMEDTLNHLKFLNVLSPRGVHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPL 272
Query: 147 SGSSVQNKTPVCSGSVTDK 165
G + + K V S+ K
Sbjct: 273 PGYTTKGKEDVHCYSMQSK 291
>gi|62243248 insulin-like growth factor binding protein 3 isoform a
precursor [Homo sapiens]
Length = 297
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 227 CDQERQSALEEAQ----QNPREGIVIPECAPGGLYKPVQCHQS----TGYCWCVLVDTGR 278
C +E + L + +PR G+ IP C G YK QC S G+CWCV G+
Sbjct: 219 CRREMEDTLNHLKFLNVLSPR-GVHIPNCDKKGFYKKKQCRPSKGRKRGFCWCV-DKYGQ 276
Query: 279 PLPGTSTR 286
PLPG +T+
Sbjct: 277 PLPGYTTK 284
Score = 40.0 bits (92), Expect = 0.004
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 95 CRLERAQALEQAK----KPQEAVFVPECGEDGSFTQVQCHTYTG----YCWCVTPDGKPI 146
CR E L K V +P C + G + + QC G +CWCV G+P+
Sbjct: 219 CRREMEDTLNHLKFLNVLSPRGVHIPNCDKKGFYKKKQCRPSKGRKRGFCWCVDKYGQPL 278
Query: 147 SGSSVQNKTPVCSGSVTDK 165
G + + K V S+ K
Sbjct: 279 PGYTTKGKEDVHCYSMQSK 297
>gi|62243290 insulin-like growth factor binding protein 4 precursor
[Homo sapiens]
Length = 258
Score = 41.6 bits (96), Expect = 0.001
Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 226 SCDQERQSALEE---AQQNPREG---IVIPECAPGGLYKPVQCHQST----GYCWCVLVD 275
SC E ALE +Q E I IP C G + P QCH + G CWCV
Sbjct: 173 SCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDRK 232
Query: 276 TGRPLPG 282
TG LPG
Sbjct: 233 TGVKLPG 239
Score = 34.7 bits (78), Expect = 0.17
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 92 QSKCRLERAQALEQAKKPQEAVF-------VPECGEDGSFTQVQCHT----YTGYCWCV 139
Q C+ E +ALE+ Q +P C +G+F QCH G CWCV
Sbjct: 171 QGSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCV 229
>gi|55925576 insulin-like growth factor binding protein 2, 36kDa
[Homo sapiens]
Length = 328
Score = 40.0 bits (92), Expect = 0.004
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 227 CDQERQSALEEA-------QQNPREGIV---IPECAPGGLYKPVQCHQST----GYCWCV 272
C QE LE ++ P E + IP C GLY QC S G CWCV
Sbjct: 230 CQQELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGECWCV 289
Query: 273 LVDTGRPLPGTSTRYVMPSC 292
+TG+ + G T P C
Sbjct: 290 NPNTGKLIQGAPTIRGDPEC 309
Score = 35.4 bits (80), Expect = 0.10
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 92 QSKCRLERAQALEQA---KKPQE--------AVFVPECGEDGSFTQVQC----HTYTGYC 136
++ C+ E Q LE+ + P E ++ +P C + G + QC + G C
Sbjct: 227 RTPCQQELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNGQRGEC 286
Query: 137 WCVTPD-GKPISGSSVQNKTPVC 158
WCV P+ GK I G+ P C
Sbjct: 287 WCVNPNTGKLIQGAPTIRGDPEC 309
>gi|10834982 insulin-like growth factor binding protein 5 [Homo
sapiens]
Length = 272
Score = 39.3 bits (90), Expect = 0.007
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 218 IRNSEKVYSCDQERQSALEEAQQNPR---EGIVIPECAPGGLYKPVQCHQS----TGYCW 270
+R + C + +++L+E + +PR + +P C G YK QC S G CW
Sbjct: 183 MRQESEQGPCRRHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQCKPSRGRKRGICW 242
Query: 271 CVLVDTGRPLPG 282
CV G LPG
Sbjct: 243 CV-DKYGMKLPG 253
Score = 35.0 bits (79), Expect = 0.13
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 88 KDAGQSKCRLERAQALEQAKKPQE----AVFVPECGEDGSFTQVQCH----TYTGYCWCV 139
+++ Q CR +L++ K AV++P C G + + QC G CWCV
Sbjct: 185 QESEQGPCRRHMEASLQELKASPRMVPRAVYLPNCDRKGFYKRKQCKPSRGRKRGICWCV 244
Query: 140 TPDGKPISG 148
G + G
Sbjct: 245 DKYGMKLPG 253
>gi|11321593 insulin-like growth factor binding protein 6 [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.009
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 88 KDAGQSKCRLERAQALEQAK----KPQEAVFVPECGEDGSFTQVQCHTYTGY----CWCV 139
+D CR L+Q + + + ++VP C G + + QC + G CWCV
Sbjct: 156 QDTEMGPCRRHLDSVLQQLQTEVYRGAQTLYVPNCDHRGFYRKRQCRSSQGQRRGPCWCV 215
Query: 140 TPDGKPISGSSVQNKTPVC 158
GK + GS N + C
Sbjct: 216 DRMGKSLPGSPDGNGSSSC 234
Score = 38.5 bits (88), Expect = 0.012
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 211 SKLNNTNIRNSEKVYSCDQERQSALEEAQQNPREG---IVIPECAPGGLYKPVQCHQSTG 267
S+ N+ ++++E + C + S L++ Q G + +P C G Y+ QC S G
Sbjct: 148 SQPNSAGVQDTE-MGPCRRHLDSVLQQLQTEVYRGAQTLYVPNCDHRGFYRKRQCRSSQG 206
Query: 268 Y----CWCVLVDTGRPLPGTSTRYVMPSC 292
CWCV G+ LPG+ SC
Sbjct: 207 QRRGPCWCV-DRMGKSLPGSPDGNGSSSC 234
>gi|189242612 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 38.9 bits (89), Expect = 0.009
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 26 GHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDGRSYESM----CEYQRAKC-RDPTLG 80
G + +G + + C+ H + +C D S + C++ KC + L
Sbjct: 776 GQKQSGSECICMSPEEDCSHHS-----EDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLH 830
Query: 81 VVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVT 140
+H G C+D Q + LER + + K + CG D + +C T C C+
Sbjct: 831 FLHIGSCQDGRQLEWGLERTRLSSNSTKKES------CGYDTCYDWEKCSASTSKCVCLL 884
Query: 141 P 141
P
Sbjct: 885 P 885
>gi|169636415 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 38.9 bits (89), Expect = 0.009
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 26 GHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDGRSYESM----CEYQRAKC-RDPTLG 80
G + +G + + C+ H + +C D S + C++ KC + L
Sbjct: 776 GQKQSGSECICMSPEEDCSHHS-----EDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLH 830
Query: 81 VVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVT 140
+H G C+D Q + LER + + K + CG D + +C T C C+
Sbjct: 831 FLHIGSCQDGRQLEWGLERTRLSSNSTKKES------CGYDTCYDWEKCSASTSKCVCLL 884
Query: 141 P 141
P
Sbjct: 885 P 885
>gi|54792136 follistatin-like 4 [Homo sapiens]
Length = 842
Score = 38.9 bits (89), Expect = 0.009
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 31 GPRFLISDR--DPQCN-LHCSRTQPKPICASDGRSYESMCEYQRAKC-RDPTLGVVHRGR 86
G R ++S + +P+C L R P+C SDGR YE+ C+ RA C + V+H
Sbjct: 73 GSRCVLSRKTGEPECQCLEACRPSYVPVCGSDGRFYENHCKLHRAACLLGKRITVIHSKD 132
Query: 87 C 87
C
Sbjct: 133 C 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,793,480
Number of Sequences: 37866
Number of extensions: 1052357
Number of successful extensions: 3032
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 2860
Number of HSP's gapped (non-prelim): 174
length of query: 434
length of database: 18,247,518
effective HSP length: 105
effective length of query: 329
effective length of database: 14,271,588
effective search space: 4695352452
effective search space used: 4695352452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.