Guide to the Human Genome
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Name: TMEFF2 Sequence: fasta or formatted (374aa) NCBI GI: 12383051
Description:

transmembrane protein with EGF-like and two follistatin-like domains 2

Referenced in:

Epidermal Growth Factor
Neurons
Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         21           2
 C cysteine            9.1         34           1
 D aspartate           6.1         23           2
 E glutamate           7.0         26           2
 F phenylalanine       2.4          9           1
 G glycine             6.7         25           1
 H histidine           2.7         10           2
 I isoleucine          4.5         17           1
 K lysine              4.3         16           2
 L leucine             5.9         22           4
 M methionine          1.3          5           1
 N asparagine          5.1         19           2
 P proline             3.5         13           1
 Q glutamine           5.3         20           2
 R arginine            4.3         16           1
 S serine              8.0         30           2
 T threonine           7.0         26           5
 V valine              6.4         24           3
 W tryptophan          1.3          5           1
 Y tyrosine            3.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein with EGF-like and two follista... 
TMEFF1                0.467   transmembrane protein with EGF-like and two follista...
AGRN                  0.108   agrin 
FST                   0.058   follistatin isoform FST317 precursor 
FST                   0.058   follistatin isoform FST344 precursor 
BTC                   0.046   betacellulin 
TGFA                  0.044   transforming growth factor, alpha isoform 2 
TGFA                  0.044   transforming growth factor, alpha isoform 1 
FSTL5                 0.041   follistatin-like 5 isoform c 
FSTL5                 0.041   follistatin-like 5 isoform b 
FSTL5                 0.041   follistatin-like 5 isoform a 
SMOC1                 0.037   secreted modular calcium-binding protein 1 isoform 1...
SMOC1                 0.037   secreted modular calcium-binding protein 1 isoform 2...
EREG                  0.037   epiregulin preproprotein 
FSTL3                 0.037   follistatin-like 3 glycoprotein precursor 
EGF                   0.036   epidermal growth factor (beta-urogastrone) 
NOTCH1                0.036   notch1 preproprotein 
NOTCH2                0.035   notch 2 preproprotein 
AREG                  0.035   amphiregulin preproprotein 
AREGB                 0.035   PREDICTED: amphiregulin B 
FSTL4                 0.033   follistatin-like 4 
HBEGF                 0.032   heparin-binding EGF-like growth factor 
NOTCH3                0.031   Notch homolog 3 
FSTL1                 0.031   follistatin-like 1 precursor 
JAG1                  0.028   jagged 1 precursor 
SMOC2                 0.028   SPARC related modular calcium binding 2 
EYS                   0.027   eyes shut homolog isoform 1 
EPGN                  0.027   epithelial mitogen 
SPINK5                0.026   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.026   serine peptidase inhibitor, Kazal type 5 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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