Search of human proteins with 223941779

Search of human proteins with 223941779

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223941779 COBW domain containing 1 isoform 3 [Homo sapiens]
         (376 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223941779 COBW domain containing 1 isoform 3 [Homo sapiens]        747   0.0  
gi|126722884 COBW domain containing 1 isoform 1 [Homo sapiens]        735   0.0  
gi|33469141 COBW domain-containing protein 2 [Homo sapiens]           726   0.0  
gi|148727351 COBW domain containing 3 [Homo sapiens]                  719   0.0  
gi|146231952 COBW domain containing 6 [Homo sapiens]                  714   0.0  
gi|119120938 COBW domain containing 5 [Homo sapiens]                  663   0.0  
gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]        635   0.0  
gi|169177343 PREDICTED: COBW domain containing 7 [Homo sapiens]       438   e-123
gi|169184311 PREDICTED: similar to COBW domain containing 1 [Hom...   309   3e-84
gi|239753286 PREDICTED: COBW domain containing 2 [Homo sapiens]       128   1e-29
gi|239752504 PREDICTED: hypothetical protein [Homo sapiens]            56   5e-08
gi|71061468 centromere protein E [Homo sapiens]                        34   0.19 
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]    33   0.55 
gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]    33   0.55 
gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...    31   1.6  
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        31   1.6  
gi|217272894 elongation factor Tu GTP binding domain containing ...    31   1.6  
gi|217272892 elongation factor Tu GTP binding domain containing ...    31   1.6  
gi|124517695 ankyrin repeat domain 36B [Homo sapiens]                  31   1.6  
gi|45505147 hypothetical protein LOC64149 [Homo sapiens]               31   2.1  
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo...    30   2.7  
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i...    30   2.7  
gi|114155142 nuclear pore complex-associated protein TPR [Homo s...    30   3.5  
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap...    30   4.6  
gi|16262452 cingulin [Homo sapiens]                                    30   4.6  
gi|4505461 ectodermal-neural cortex (with BTB-like domain) [Homo...    29   6.0  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       29   6.0  
gi|239757710 PREDICTED: hypothetical protein [Homo sapiens]            29   7.9  
gi|239752195 PREDICTED: hypothetical protein XP_002348131 [Homo ...    29   7.9  
gi|239746718 PREDICTED: hypothetical protein XP_002343801 [Homo ...    29   7.9  

>gi|223941779 COBW domain containing 1 isoform 3 [Homo sapiens]
          Length = 376

 Score =  747 bits (1928), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI
Sbjct: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
Sbjct: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKK 240
           EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKK
Sbjct: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKK 240

Query: 241 LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL 300
           LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL
Sbjct: 241 LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL 300

Query: 301 VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTE 360
           VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTE
Sbjct: 301 VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTE 360

Query: 361 TEKQWTTRFQEDQVCT 376
           TEKQWTTRFQEDQVCT
Sbjct: 361 TEKQWTTRFQEDQVCT 376


>gi|126722884 COBW domain containing 1 isoform 1 [Homo sapiens]
          Length = 395

 Score =  735 bits (1898), Expect = 0.0
 Identities = 376/395 (95%), Positives = 376/395 (95%), Gaps = 19/395 (4%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI
Sbjct: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
Sbjct: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS----- 235
           EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS     
Sbjct: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLS 240

Query: 236 --------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 281
                         SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE
Sbjct: 241 NVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 300

Query: 282 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 341
           KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL
Sbjct: 301 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 360

Query: 342 GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376
           GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Sbjct: 361 GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 395


>gi|33469141 COBW domain-containing protein 2 [Homo sapiens]
          Length = 395

 Score =  726 bits (1873), Expect = 0.0
 Identities = 370/395 (93%), Positives = 373/395 (94%), Gaps = 19/395 (4%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGSADEEEDPAEEDCPELVP+ETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSADEEEDPAEEDCPELVPMETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKD+GLRAI
Sbjct: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHL E
Sbjct: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLAE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS----- 235
           EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLR TIRSINGLGQILETQRS     
Sbjct: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLS 240

Query: 236 --------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 281
                         SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE
Sbjct: 241 NVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 300

Query: 282 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 341
           KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL
Sbjct: 301 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 360

Query: 342 GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376
           GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 361 GRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|148727351 COBW domain containing 3 [Homo sapiens]
          Length = 395

 Score =  719 bits (1857), Expect = 0.0
 Identities = 368/395 (93%), Positives = 371/395 (93%), Gaps = 19/395 (4%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGS DEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSVDEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKD+GLRAI
Sbjct: 61  YILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFD ILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
Sbjct: 121 ENLMQKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS----- 235
           EKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS     
Sbjct: 181 EKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLS 240

Query: 236 --------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 281
                         SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE
Sbjct: 241 NVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 300

Query: 282 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 341
           KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVL+
Sbjct: 301 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLI 360

Query: 342 GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376
           GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 361 GRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|146231952 COBW domain containing 6 [Homo sapiens]
          Length = 395

 Score =  714 bits (1843), Expect = 0.0
 Identities = 365/395 (92%), Positives = 370/395 (93%), Gaps = 19/395 (4%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGS DEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSVDEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKD+GLRAI
Sbjct: 61  YILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFD ILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
Sbjct: 121 ENLMQKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRS----- 235
           EKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTT+RSINGLGQILETQRS     
Sbjct: 181 EKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTLRSINGLGQILETQRSRVDLS 240

Query: 236 --------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWE 281
                         SLQKKLQHVPGTQPHLDQSIVTITF+VPGNAKEEHLNMFIQNLLWE
Sbjct: 241 NVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFDVPGNAKEEHLNMFIQNLLWE 300

Query: 282 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 341
           KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHEL DLEETPVSWKDDTERTNRLVL+
Sbjct: 301 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELCDLEETPVSWKDDTERTNRLVLI 360

Query: 342 GRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376
           GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 361 GRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|119120938 COBW domain containing 5 [Homo sapiens]
          Length = 347

 Score =  663 bits (1710), Expect = 0.0
 Identities = 339/376 (90%), Positives = 342/376 (90%), Gaps = 29/376 (7%)

Query: 1   MLPAVGSADEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60
           MLPAVGS DEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN
Sbjct: 1   MLPAVGSVDEEEDPAEEDCPELVPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLN 60

Query: 61  YILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAI 120
           YILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKD+GLRAI
Sbjct: 61  YILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAI 120

Query: 121 ENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180
           ENLMQKKGKFD ILLETTGLADPGAV SMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE
Sbjct: 121 ENLMQKKGKFDDILLETTGLADPGAVTSMFWVDAELGSDIYLDGIITIVDSKYGLKHLTE 180

Query: 181 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKK 240
           EKPDGLINEAT                             RSINGLGQILETQRSSLQKK
Sbjct: 181 EKPDGLINEAT-----------------------------RSINGLGQILETQRSSLQKK 211

Query: 241 LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL 300
           LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL
Sbjct: 212 LQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGL 271

Query: 301 VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTE 360
           VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVL+GRNLDKDILKQLFIATVTE
Sbjct: 272 VSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLFIATVTE 331

Query: 361 TEKQWTTRFQEDQVCT 376
           TEKQWTT F+EDQVCT
Sbjct: 332 TEKQWTTHFKEDQVCT 347


>gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]
          Length = 359

 Score =  635 bits (1638), Expect = 0.0
 Identities = 325/344 (94%), Positives = 325/344 (94%), Gaps = 19/344 (5%)

Query: 52  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111
           GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75

Query: 112 VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171
           VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135

Query: 172 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 231
           KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE
Sbjct: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195

Query: 232 TQRS-------------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 272
           TQRS                   SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255

Query: 273 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 332
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315

Query: 333 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376
           ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Sbjct: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359


>gi|169177343 PREDICTED: COBW domain containing 7 [Homo sapiens]
          Length = 247

 Score =  438 bits (1127), Expect = e-123
 Identities = 224/247 (90%), Positives = 226/247 (91%), Gaps = 19/247 (7%)

Query: 149 MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLV 208
           MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD ILINKTDLV
Sbjct: 1   MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV 60

Query: 209 PEEDVKKLRTTIRSINGLGQILETQRS-------------------SLQKKLQHVPGTQP 249
           PEEDVKKLRTTIRSINGLGQILETQRS                   SLQKKLQHVPGTQP
Sbjct: 61  PEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQP 120

Query: 250 HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ 309
           HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ
Sbjct: 121 HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ 180

Query: 310 VIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRF 369
           VIVQGVHELYDLEETPVSWKDDTERTNRLVL+GRNLDKDILKQLFIATVTETEKQWTT F
Sbjct: 181 VIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLFIATVTETEKQWTTHF 240

Query: 370 QEDQVCT 376
           +EDQVCT
Sbjct: 241 KEDQVCT 247


>gi|169184311 PREDICTED: similar to COBW domain containing 1 [Homo
           sapiens]
          Length = 181

 Score =  309 bits (791), Expect = 3e-84
 Identities = 159/181 (87%), Positives = 161/181 (88%), Gaps = 19/181 (10%)

Query: 175 LKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR 234
           ++HLTEEKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR
Sbjct: 1   MRHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR 60

Query: 235 S-------------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI 275
           S                   SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI
Sbjct: 61  SRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI 120

Query: 276 QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT 335
           QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT
Sbjct: 121 QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT 180

Query: 336 N 336
           N
Sbjct: 181 N 181


>gi|239753286 PREDICTED: COBW domain containing 2 [Homo sapiens]
          Length = 77

 Score =  128 bits (321), Expect = 1e-29
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 52  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111
           GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75

Query: 112 VK 113
           VK
Sbjct: 76  VK 77


>gi|239752504 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 51

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 275 IQNLLWEKNVRNKDNHCMEVIRLKGLVSIKD 305
           IQNLLWEKNVRNKDNHCMEVIRLK   ++ D
Sbjct: 11  IQNLLWEKNVRNKDNHCMEVIRLKVQFTVAD 41


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 19/186 (10%)

Query: 179  TEEKPDGLINEATRQVALADAILINKTDLVPEEDVK---KLRTTIRSINGLGQILETQRS 235
            T +K  G+++E T +++     L +  D +  +D+K   +LR     +    + ++  R 
Sbjct: 1736 TIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRG 1795

Query: 236  SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVI 295
             + +K   +   Q  L+ S   +  ++      EH     Q +  +K+V        E+ 
Sbjct: 1796 IVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEH-----QLITLKKDVNETQKKVSEME 1850

Query: 296  RLKGLVSIKDKSQQV---------IVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLD 346
            +LK    IKD+S  +         + Q +HE  +  ++ +  +D+  R    + L R+  
Sbjct: 1851 QLK--KQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQL 1908

Query: 347  KDILKQ 352
            K+ L++
Sbjct: 1909 KESLQE 1914


>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
          Length = 1173

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 29  QSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHS---KRVAVILNEFGEGSALE 85
           Q +E+ + G G K P+ I     G   +T     L E+H    K+ +V ++   +    E
Sbjct: 688 QLQEDIRQGRGIKSPIRI-----GEEDSTDDEDGLLEEHKEFLKKFSVTIDAIPDHHPGE 742

Query: 86  KSLAVSQGGELYEEW-LELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTG 139
           +       G+++ ++ L+LR+          G  A+E L+ K GK D I L T G
Sbjct: 743 EIFNFLNSGKIFNQYTLDLRDSGFI------GQSAVEKLILKSGKTDQIFLTTQG 791


>gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]
          Length = 1186

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 29  QSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHS---KRVAVILNEFGEGSALE 85
           Q +E+ + G G K P+ I     G   +T     L E+H    K+ +V ++   +    E
Sbjct: 688 QLQEDIRQGRGIKSPIRI-----GEEDSTDDEDGLLEEHKEFLKKFSVTIDAIPDHHPGE 742

Query: 86  KSLAVSQGGELYEEW-LELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTG 139
           +       G+++ ++ L+LR+          G  A+E L+ K GK D I L T G
Sbjct: 743 EIFNFLNSGKIFNQYTLDLRDSGFI------GQSAVEKLILKSGKTDQIFLTTQG 791


>gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
           sapiens]
          Length = 475

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 279 LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 323
           LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 37  LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 89


>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 1524

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 279  LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 323
            LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 987  LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 1039


>gi|217272894 elongation factor Tu GTP binding domain containing 2
           isoform b [Homo sapiens]
          Length = 937

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 12/86 (13%)

Query: 163 DGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTD-------LVPEEDVKK 215
           DG++  +D+  G+   TE     LI  A ++  LA  + INK D       L P +   K
Sbjct: 188 DGVVLFIDAAEGVMLNTER----LIKHAVQE-RLAVTVCINKIDRLILELKLPPTDAYYK 242

Query: 216 LRTTIRSINGLGQILETQRSSLQKKL 241
           LR  +  +NGL  +  T  + +   L
Sbjct: 243 LRHIVDEVNGLISMYSTDENLILSPL 268


>gi|217272892 elongation factor Tu GTP binding domain containing 2
           isoform a [Homo sapiens]
          Length = 972

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 12/86 (13%)

Query: 163 DGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTD-------LVPEEDVKK 215
           DG++  +D+  G+   TE     LI  A ++  LA  + INK D       L P +   K
Sbjct: 223 DGVVLFIDAAEGVMLNTER----LIKHAVQE-RLAVTVCINKIDRLILELKLPPTDAYYK 277

Query: 216 LRTTIRSINGLGQILETQRSSLQKKL 241
           LR  +  +NGL  +  T  + +   L
Sbjct: 278 LRHIVDEVNGLISMYSTDENLILSPL 303


>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
          Length = 1121

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 279 LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 323
           LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 584 LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 636


>gi|45505147 hypothetical protein LOC64149 [Homo sapiens]
          Length = 396

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 24  PIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYILTEQHSKRVAVILNEFGEGSA 83
           P+E  +S+E+ K  +   + V  + G +  G  T L   +TE+  K V +      + S+
Sbjct: 229 PVEVKESDEKTKRDINRFLSVASLQGLIHEGTMTSLCMAMTEEQHKSVVI------DCSS 282

Query: 84  LEKSLAVSQGGELYEEWLE 102
            +     +      E+W++
Sbjct: 283 SQPQFCNAGSNRFCEDWMQ 301


>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
            sapiens]
          Length = 1657

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 28/145 (19%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 158  SDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATR-----QVALADAILINKTDLVPEED 212
            S+  L+  + ++D K GL    +     +++ + +     +  L+D ++INK     +  
Sbjct: 902  SNQQLENDLNLMDIKIGLLVKNKITLQDVVSHSKKLTKKNKEQLSDMMMINKQKGGLKAL 961

Query: 213  VKKLRTTIRSINGLGQILETQRSSLQKKLQHVPGTQP--HLDQSIVTITFEVPGNAKEEH 270
             K+ R  + +   L  +L+T  + L K +  +P  +    +D  I T+ +    N +EE+
Sbjct: 962  SKEKREKLEAYQHLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTL-YNYASNQREEY 1020

Query: 271  LNMFIQNLLWEKNVRNKDNHCMEVI 295
            L + +     ++ +++K +   E++
Sbjct: 1021 LLLRLFKTALQEEIKSKVDQIQEIV 1045


>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
           isoform 1 [Homo sapiens]
          Length = 721

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 56/237 (23%)

Query: 136 ETTGLADPGAVASMFWVDAELGSDIY-LDGIITIVDSKY--GLKHLTEEKPDGLINEATR 192
           +T+ L DP    S          DIY L   I  V+ +Y  GLK L E   +  + E  +
Sbjct: 330 DTSSLIDPDTSLSEL-------RDIYDLKDQIQDVEGRYMQGLKELKESLSE--VEEKYK 380

Query: 193 QVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKKLQHVPGTQPHLD 252
           +  +++A L N+ +             I  ++ L  ++E Q   + +  +        L+
Sbjct: 381 KAMVSNAQLDNEKN-----------NLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELE 429

Query: 253 QSIVTITFEVPGNAKEEHLNMFIQNLLWE--KNVRNKDNHCMEVIRLKGLVSIKDKSQQV 310
                         +++H+   +Q+ + E  + +R +D           L+  K + QQ 
Sbjct: 430 --------------RQKHMCSVLQHKMEELKEGLRQRDE----------LIEEKQRMQQK 465

Query: 311 IVQGVHELYDLEETPVSWKDD----TERTNRLVLLGRNLDKDILKQLFIATVTETEK 363
           I     E++DL+ET + WKD      E+    +   RN ++D+L++  +A + ET K
Sbjct: 466 IDTMTKEVFDLQET-LLWKDKKIGALEKQKEYIACLRN-ERDMLRE-ELADLQETVK 519


>gi|114155142 nuclear pore complex-associated protein TPR [Homo
           sapiens]
          Length = 2363

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 194 VALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSSLQKKLQHVPGTQPHLDQ 253
           V   D +L+ K  L  +   K L   ++ +     IL+ QR   ++  + V      L+Q
Sbjct: 403 VETQDQLLLEK--LENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQ 460

Query: 254 SIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIV- 312
           ++           KE      IQ L  + +  NK +  +E    +  + +KD SQQ+ V 
Sbjct: 461 AM-----------KE------IQRLQEDTDKANKQSSVLERDNRRMEIQVKDLSQQIRVL 503

Query: 313 -------QGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQW 365
                  +G H + D E +       +E  ++ ++  RN+++  L+Q     +    +  
Sbjct: 504 LMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEE--LQQQNQRLLVALRELG 561

Query: 366 TTRFQEDQVCT 376
            TR +E+Q  T
Sbjct: 562 ETREREEQETT 572


>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo
           sapiens]
          Length = 1581

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 11/105 (10%)

Query: 44  VTIITGYLGAGKTTLLNYI--LTEQHSKRVAVILNEFGEGSALE---KSLAVSQGGELYE 98
           +T I G+ GAGK+TLLN +  L+      V +  N+  E + LE   K   V     +  
Sbjct: 511 ITAILGHSGAGKSTLLNILSGLSVPTKGSVTIYNNKLSEMADLENLSKLTGVCPQSNVQF 570

Query: 99  EWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADP 143
           ++L +R   L    K  G+     L Q+  K  ++L E T   DP
Sbjct: 571 DFLTVREN-LRLFAKIKGI-----LPQEVDKEIFLLDEPTAGLDP 609


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 27/155 (17%)

Query: 230 LETQRSSLQKKLQHVPGTQPHLDQSIVTI--TFEVPGNAKEEHLNMFIQNLLWEKNVRNK 287
           LETQ   LQ KL+HV G +P  +  +  +  T E+     E    +  Q  L E+     
Sbjct: 441 LETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRER----- 495

Query: 288 DNHCMEVIRLKGLVSIKDKSQQVIVQGVHELY--DLEETPVSWKDDTE-------RTNRL 338
                E+  LKG +  +  S+   V+ V + Y  D E+   S +D T+          ++
Sbjct: 496 -----ELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKM 550

Query: 339 VLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQ 373
             L R L ++      +   +E    W + FQ+++
Sbjct: 551 SALVRGLQRE------LEETSEETGHWQSMFQKNK 579


>gi|4505461 ectodermal-neural cortex (with BTB-like domain) [Homo
           sapiens]
          Length = 589

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 10/151 (6%)

Query: 16  EEDCPELVPIETTQSEEEEKSG--LGAKIPVTIITGYL-GAGKTTLLNYILTEQHSKRVA 72
           ++   E++P     S  +E S   +G K+ +T   G   G  K   +   L E+ SK   
Sbjct: 314 DQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAP 373

Query: 73  VILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDY 132
           +++  FG GSA  K      GG           GCL  S   S L+ +E+      K+  
Sbjct: 374 MLVARFGHGSAELKHCLYVVGGH------TAATGCLPASPSVS-LKQVEHYDPTINKWTM 426

Query: 133 ILLETTGLADPGAVASMFWVDAELGSDIYLD 163
           +     G+++   V++   + A  G+ +  D
Sbjct: 427 VAPLREGVSNAAVVSAKLKLFAFGGTSVSHD 457


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 170  DSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSI 223
            DS Y L+   EE+ DG +  A+       ++  N TD +    +K LR   R++
Sbjct: 4119 DSSYVLEIAGEEEEDGSLEPASAFAMACASVKRNVTDFLKRATLKNLRKQYRNV 4172


>gi|239757710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 79  GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 123
           G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23  GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


>gi|239752195 PREDICTED: hypothetical protein XP_002348131 [Homo
           sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 79  GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 123
           G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23  GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


>gi|239746718 PREDICTED: hypothetical protein XP_002343801 [Homo
           sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 79  GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 123
           G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23  GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,234,131
Number of Sequences: 37866
Number of extensions: 628647
Number of successful extensions: 2043
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2014
Number of HSP's gapped (non-prelim): 39
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.