Guide to the Human Genome
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Name: CBWD5 Sequence: fasta or formatted (347aa) NCBI GI: 119120938
Description:

COBW domain containing 5

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         14           1
 C cysteine            1.7          6           2
 D aspartate           6.1         21           2
 E glutamate          11.0         38           4
 F phenylalanine       1.7          6           1
 G glycine             7.5         26           2
 H histidine           2.3          8           1
 I isoleucine          6.9         24           2
 K lysine              7.2         25           2
 L leucine            11.8         41           2
 M methionine          1.4          5           1
 N asparagine          4.3         15           1
 P proline             3.2         11           1
 Q glutamine           4.9         17           2
 R arginine            2.9         10           1
 S serine              5.5         19           2
 T threonine           7.5         26           2
 V valine              6.9         24           1
 W tryptophan          1.4          5           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COBW domain containing 5 
CBWD3                 0.957   COBW domain containing 3 
CBWD1                 0.952   COBW domain containing 1 isoform 3 
CBWD6                 0.949   COBW domain containing 6 
CBWD2                 0.940   COBW domain-containing protein 2 
CBWD1                 0.934   COBW domain containing 1 isoform 1 
CBWD1                 0.788   COBW domain containing 1 isoform 2 
CBWD7                 0.525   PREDICTED: COBW domain containing 7 
LOC653510             0.324   PREDICTED: similar to COBW domain containing 1 [Hom...
CBWD2                 0.149   PREDICTED: COBW domain containing 2 
LOC653510             0.046   PREDICTED: hypothetical protein 
FAM178A               0.010   hypothetical protein LOC55719 isoform 1 
FAM178A               0.010   hypothetical protein LOC55719 isoform 2 
LRRFIP2               0.010   leucine rich repeat (in FLII) interacting protein 2 i...
LOC730658             0.009   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.009   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.009   ankyrin repeat domain 36B 
IQGAP1                0.009   IQ motif containing GTPase activating protein 1 [Homo...
C17orf75              0.009   hypothetical protein LOC64149 
SLC12A1               0.007   sodium potassium chloride cotransporter 2 
TPR                   0.007   nuclear pore complex-associated protein TPR 
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1...
LOC100293185          0.007   PREDICTED: hypothetical protein 
LOC100290807          0.007   PREDICTED: hypothetical protein XP_002348131 
LOC100289664          0.007   PREDICTED: hypothetical protein XP_002343801 
C15orf60              0.007   hypothetical protein LOC283677 
DHX30                 0.007   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.007   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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