Guide to the Human Genome
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Name: LOC653510 Sequence: fasta or formatted (51aa) NCBI GI: 239752504
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {181aa} PREDICTED: similar to COBW domain containing 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          1           1
 C cysteine            3.9          2           1
 D aspartate           3.9          2           1
 E glutamate           3.9          2           1
 F phenylalanine       5.9          3           1
 G glycine             2.0          1           1
 H histidine           3.9          2           1
 I isoleucine          7.8          4           1
 K lysine              9.8          5           1
 L leucine            13.7          7           2
 M methionine          3.9          2           1
 N asparagine          7.8          4           1
 P proline             0.0          0           0
 Q glutamine           3.9          2           1
 R arginine            3.9          2           1
 S serine              3.9          2           1
 T threonine           3.9          2           1
 V valine              9.8          5           1
 W tryptophan          5.9          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
CBWD1                 0.360   COBW domain containing 1 isoform 3 
CBWD1                 0.360   COBW domain containing 1 isoform 2 
LOC653510             0.360   PREDICTED: similar to COBW domain containing 1 [Hom...
CBWD7                 0.360   PREDICTED: COBW domain containing 7 
CBWD6                 0.360   COBW domain containing 6 
CBWD2                 0.360   COBW domain-containing protein 2 
CBWD3                 0.360   COBW domain containing 3 
CBWD1                 0.360   COBW domain containing 1 isoform 1 
CBWD5                 0.360   COBW domain containing 5 
LOC730658             0.023   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.023   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.023   ankyrin repeat domain 36B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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