Guide to the Human Genome
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Name: LOC653510 Sequence: fasta or formatted (181aa) NCBI GI: 169184311
Description:

PREDICTED: similar to COBW domain containing 1

Not currently referenced in the text

Other entries for this name:
alt prot {51aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8          5           1
 C cysteine            0.6          1           1
 D aspartate           7.2         13           2
 E glutamate           8.3         15           2
 F phenylalanine       1.7          3           1
 G glycine             4.4          8           1
 H histidine           3.9          7           1
 I isoleucine          7.7         14           2
 K lysine              7.2         13           2
 L leucine            12.2         22           2
 M methionine          1.7          3           1
 N asparagine          6.1         11           1
 P proline             3.3          6           1
 Q glutamine           6.1         11           2
 R arginine            5.0          9           1
 S serine              5.5         10           1
 T threonine           6.6         12           2
 V valine              8.3         15           1
 W tryptophan          1.1          2           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to COBW domain containing 1 [Hom... 
CBWD7                 0.994   PREDICTED: COBW domain containing 7 
CBWD3                 0.994   COBW domain containing 3 
CBWD1                 0.988   COBW domain containing 1 isoform 2 
CBWD1                 0.988   COBW domain containing 1 isoform 1 
CBWD6                 0.979   COBW domain containing 6 
CBWD2                 0.976   COBW domain-containing protein 2 
CBWD1                 0.848   COBW domain containing 1 isoform 3 
CBWD5                 0.648   COBW domain containing 5 
LOC653510             0.093   PREDICTED: hypothetical protein 
LOC730658             0.018   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.018   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.018   ankyrin repeat domain 36B 
MYT1L                 0.009   myelin transcription factor 1-like 
ITGAM                 0.009   integrin alpha M isoform 1 precursor 
ITGAM                 0.009   integrin alpha M isoform 2 precursor 
ACTBL3                0.009   PREDICTED: actin, beta-like 3 
ACTBL3                0.009   PREDICTED: actin, beta-like 3 
ACTBL3                0.009   PREDICTED: kappa-actin 
COL12A1               0.009   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.009   collagen, type XII, alpha 1 long isoform precursor [...
POTEF                 0.006   prostate, ovary, testis expressed protein on chromo...
FRK                   0.006   fyn-related kinase 
GNL1                  0.006   guanine nucleotide binding protein-like 1 
POTEE                 0.006   protein expressed in prostate, ovary, testis, and p...
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform b precursor...
NOL8                  0.006   nucleolar protein 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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