Guide to the Human Genome
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Name: CBWD6 Sequence: fasta or formatted (395aa) NCBI GI: 146231952
Description:

COBW domain containing 6

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           1
 C cysteine            1.8          7           2
 D aspartate           7.1         28           2
 E glutamate           9.9         39           4
 F phenylalanine       1.8          7           1
 G glycine             6.8         27           2
 H histidine           2.3          9           1
 I isoleucine          7.1         28           2
 K lysine              7.1         28           2
 L leucine            12.7         50           2
 M methionine          1.3          5           1
 N asparagine          4.3         17           1
 P proline             3.0         12           1
 Q glutamine           4.6         18           2
 R arginine            3.3         13           1
 S serine              5.6         22           1
 T threonine           7.1         28           2
 V valine              7.3         29           1
 W tryptophan          1.3          5           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COBW domain containing 6 
CBWD3                 0.991   COBW domain containing 3 
CBWD2                 0.971   COBW domain-containing protein 2 
CBWD1                 0.968   COBW domain containing 1 isoform 1 
CBWD1                 0.907   COBW domain containing 1 isoform 3 
CBWD1                 0.839   COBW domain containing 1 isoform 2 
CBWD5                 0.837   COBW domain containing 5 
CBWD7                 0.609   PREDICTED: COBW domain containing 7 
LOC653510             0.432   PREDICTED: similar to COBW domain containing 1 [Hom...
CBWD2                 0.132   PREDICTED: COBW domain containing 2 
LOC653510             0.041   PREDICTED: hypothetical protein 
FAM178A               0.009   hypothetical protein LOC55719 isoform 1 
FAM178A               0.009   hypothetical protein LOC55719 isoform 2 
LOC730658             0.008   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.008   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.008   ankyrin repeat domain 36B 
C17orf75              0.008   hypothetical protein LOC64149 
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.007   v-ets erythroblastosis virus E26 oncogene homolog 1...
LOC100293185          0.007   PREDICTED: hypothetical protein 
LOC100290807          0.007   PREDICTED: hypothetical protein XP_002348131 
LOC100289664          0.007   PREDICTED: hypothetical protein XP_002343801 
DHX30                 0.007   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.007   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
SLC12A1               0.005   sodium potassium chloride cotransporter 2 
ABCA8                 0.005   ATP-binding cassette, sub-family A member 8 
SYNE1                 0.005   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.005   spectrin repeat containing, nuclear envelope 1 isof...
AIFM1                 0.005   programmed cell death 8 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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