Guide to the Human Genome
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Name: ANKRD20A2 Sequence: fasta or formatted (823aa) NCBI GI: 60115723
Description:

ankyrin repeat domain 20 family, member A2

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         59           3
 C cysteine            1.9         16           1
 D aspartate           5.3         44           2
 E glutamate          10.9         90           3
 F phenylalanine       1.8         15           1
 G glycine             3.5         29           1
 H histidine           3.2         26           2
 I isoleucine          4.9         40           2
 K lysine             11.3         93           3
 L leucine             9.4         77           2
 M methionine          1.7         14           1
 N asparagine          5.3         44           2
 P proline             2.3         19           2
 Q glutamine           6.2         51           3
 R arginine            5.5         45           2
 S serine              6.8         56           2
 T threonine           4.6         38           1
 V valine              5.7         47           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 20 family, member A2 
ANKRD20A3             0.997   ankyrin repeat domain 20 family, member A3 
ANKRD20A1             0.993   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.991   ankyrin repeat domain 20 family, member A4 
ANKRD20A5             0.876   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.876   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD62               0.280   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.280   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.279   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD18B              0.222   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.222   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.221   PREDICTED: ankyrin repeat domain 18B 
LOC100132733          0.221   PREDICTED: similar to FLJ00310 protein 
ANKRD18A              0.216   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.216   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.216   PREDICTED: ankyrin repeat domain 18A 
ANKRD26               0.189   ankyrin repeat domain 26 
ANKRD30A              0.162   ankyrin repeat domain 30A 
ANKRD30B              0.155   ankyrin repeat domain 30B 
CCDC144A              0.155   coiled-coil domain containing 144A 
POTEF                 0.154   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.154   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.151   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.150   PREDICTED: similar to protein expressed in prostate,...
LOC653269             0.140   PREDICTED: similar to protein expressed in prostate...
ACTBL3                0.139   PREDICTED: kappa-actin 
ACTBL3                0.139   PREDICTED: actin, beta-like 3 
ACTBL3                0.139   PREDICTED: actin, beta-like 3 
POTEA                 0.135   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEG                 0.129   POTE ankyrin domain family, member G 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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