Guide to the Human Genome
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Name: LOC730465 Sequence: fasta or formatted (193aa) NCBI GI: 169209369
Description:

PREDICTED: similar to Putative ankyrin repeat domain-containing protein ENSP00000383090

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [251aa] PREDICTED: similar to hCG1793014
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         19           2
 C cysteine            3.1          6           1
 D aspartate           5.7         11           1
 E glutamate           8.3         16           1
 F phenylalanine       1.0          2           1
 G glycine             4.7          9           1
 H histidine           3.1          6           1
 I isoleucine          4.7          9           1
 K lysine              6.7         13           1
 L leucine            10.4         20           3
 M methionine          1.6          3           1
 N asparagine          6.7         13           1
 P proline             4.7          9           1
 Q glutamine           4.1          8           2
 R arginine            3.6          7           1
 S serine              5.2         10           1
 T threonine           5.7         11           1
 V valine              7.8         15           2
 W tryptophan          0.5          1           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative ankyrin repeat domai... 
LOC729722             0.964   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.964   PREDICTED: ankyrin repeat domain-containing protein...
ANKRD30A              0.685   ankyrin repeat domain 30A 
ANKRD30B              0.660   ankyrin repeat domain 30B 
LOC730465             0.608   PREDICTED: similar to hCG1793014 
LOC100132257          0.605   PREDICTED: similar to Putative ankyrin repeat domai...
LOC100132257          0.597   PREDICTED: similar to Putative ankyrin repeat domai...
LOC729549             0.493   PREDICTED: similar to hCG1793014 
LOC729549             0.493   PREDICTED: similar to hCG1793014 
LOC729549             0.479   PREDICTED: similar to UNCoordinated family member (...
ANKRD26               0.447   ankyrin repeat domain 26 
POTEA                 0.395   POTE ankyrin domain family, member A isoform 1 [Homo...
ANKRD20A4             0.364   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.362   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.362   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.359   ankyrin repeat domain 20 family, member A1 
ANKRD18B              0.359   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.359   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.356   PREDICTED: ankyrin repeat domain 18B 
ANKRD62               0.353   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.353   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.353   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD20A5             0.348   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.348   PREDICTED: ankyrin repeat domain 20 family, member ...
POTEA                 0.345   POTE ankyrin domain family, member A isoform 2 [Homo...
P704P                 0.342   prostate-specific P704P 
POTEH                 0.342   ANKRD26-like family C, member 3 
POTEE                 0.340   protein expressed in prostate, ovary, testis, and p...
POTEF                 0.340   prostate, ovary, testis expressed protein on chromo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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