Guide to the Human Genome
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Name: LOC729722 Sequence: fasta or formatted (270aa) NCBI GI: 239756223
Description:

PREDICTED: ankyrin repeat domain-containing protein ENSP00000383090-like

Referenced in:

Ankyrin Family

Other entries for this name:
alt mRNA [270aa] PREDICTED: ankyrin repeat domain-containing protein ENSP000003830...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         20           2
 C cysteine            3.7         10           2
 D aspartate           5.6         15           1
 E glutamate           7.4         20           1
 F phenylalanine       1.5          4           1
 G glycine             5.6         15           1
 H histidine           2.2          6           1
 I isoleucine          5.6         15           1
 K lysine              6.7         18           1
 L leucine             9.3         25           3
 M methionine          2.2          6           1
 N asparagine          5.6         15           1
 P proline             6.3         17           1
 Q glutamine           4.8         13           2
 R arginine            4.1         11           1
 S serine              5.6         15           1
 T threonine           4.8         13           1
 V valine              8.1         22           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain-containing protein... 
LOC729722             1.000   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.667   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD30A              0.477   ankyrin repeat domain 30A 
ANKRD30B              0.460   ankyrin repeat domain 30B 
LOC730465             0.424   PREDICTED: similar to hCG1793014 
LOC100132257          0.422   PREDICTED: similar to Putative ankyrin repeat domai...
LOC100132257          0.417   PREDICTED: similar to Putative ankyrin repeat domai...
LOC729549             0.341   PREDICTED: similar to hCG1793014 
LOC729549             0.341   PREDICTED: similar to hCG1793014 
LOC729549             0.331   PREDICTED: similar to UNCoordinated family member (...
ANKRD26               0.311   ankyrin repeat domain 26 
POTEA                 0.273   POTE ankyrin domain family, member A isoform 1 [Homo...
ANKRD20A4             0.258   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.256   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.256   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.254   ankyrin repeat domain 20 family, member A1 
ANKRD18B              0.250   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.250   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.250   PREDICTED: ankyrin repeat domain 18B 
ANKRD20A5             0.244   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD62               0.244   PREDICTED: ankyrin repeat domain 62 
ANKRD20A5             0.244   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD62               0.244   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.244   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
POTEA                 0.239   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD18A              0.237   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.237   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.237   PREDICTED: ankyrin repeat domain 18A 
P704P                 0.237   prostate-specific P704P 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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