Guide to the Human Genome
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Name: LOC730465 Sequence: fasta or formatted (251aa) NCBI GI: 239757617
Description:

PREDICTED: similar to hCG1793014

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [193aa] PREDICTED: similar to Putative ankyrin repeat domain-containing p...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         27           3
 C cysteine            4.0         10           1
 D aspartate           5.6         14           1
 E glutamate           5.6         14           1
 F phenylalanine       1.6          4           1
 G glycine             6.0         15           1
 H histidine           2.8          7           2
 I isoleucine          5.2         13           1
 K lysine              6.8         17           2
 L leucine            10.0         25           3
 M methionine          4.0         10           2
 N asparagine          6.0         15           2
 P proline             2.0          5           1
 Q glutamine           3.2          8           1
 R arginine            5.2         13           1
 S serine              4.4         11           2
 T threonine           5.6         14           2
 V valine              8.4         21           2
 W tryptophan          1.2          3           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1793014 
LOC100132257          0.678   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD30B              0.637   ankyrin repeat domain 30B 
ANKRD30A              0.544   ankyrin repeat domain 30A 
LOC100132257          0.502   PREDICTED: similar to Putative ankyrin repeat domai...
LOC729549             0.485   PREDICTED: similar to hCG1793014 
LOC729549             0.485   PREDICTED: similar to hCG1793014 
LOC729549             0.475   PREDICTED: similar to UNCoordinated family member (...
LOC729722             0.465   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.465   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.461   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD18B              0.419   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.419   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.419   PREDICTED: ankyrin repeat domain 18B 
ANKRD62               0.400   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.400   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD18A              0.400   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.400   PREDICTED: ankyrin repeat domain 18A 
ANKRD62               0.400   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD18A              0.400   PREDICTED: ankyrin repeat domain 18A 
ANKRD20A3             0.396   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.396   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.396   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.396   ankyrin repeat domain 20 family, member A4 
POTEH                 0.392   ANKRD26-like family C, member 3 
POTEA                 0.390   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD20A5             0.390   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.390   PREDICTED: ankyrin repeat domain 20 family, member ...
POTEG                 0.388   POTE ankyrin domain family, member G 
P704P                 0.388   prostate-specific P704P 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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