Guide to the Human Genome
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Name: ASB12 Sequence: fasta or formatted (309aa) NCBI GI: 22208955
Description:

ankyrin repeat and SOCS box-containing protein 12

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         30           2
 C cysteine            2.9          9           1
 D aspartate           7.1         22           2
 E glutamate           3.9         12           3
 F phenylalanine       1.6          5           1
 G glycine             5.8         18           2
 H histidine           3.2         10           2
 I isoleucine          4.5         14           1
 K lysine              2.9          9           1
 L leucine            16.8         52           4
 M methionine          1.0          3           1
 N asparagine          3.9         12           2
 P proline             5.5         17           2
 Q glutamine           5.8         18           1
 R arginine            5.2         16           2
 S serine              6.5         20           1
 T threonine           3.9         12           1
 V valine              5.5         17           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 12 [H... 
ASB1                  0.273   ankyrin repeat and SOCS box-containing protein 1 [Ho...
ASB5                  0.116   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ASB11                 0.106   ankyrin repeat and SOCS box-containing protein 11 is...
ASB11                 0.106   ankyrin repeat and SOCS box-containing protein 11 is...
ASB3                  0.106   ankyrin repeat and SOCS box-containing protein 3 isof...
ANKHD1                0.104   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.104   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.104   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.104   ANKHD1-EIF4EBP3 protein 
ASB9                  0.102   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ANKRD17               0.102   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.102   ankyrin repeat domain protein 17 isoform b 
ASB13                 0.101   ankyrin repeat and SOCS box-containing protein 13 [H...
ANK1                  0.099   ankyrin 1 isoform 9 
ANK1                  0.099   ankyrin 1 isoform 1 
ANK1                  0.099   ankyrin 1 isoform 3 
ANK1                  0.099   ankyrin 1 isoform 2 
ANK1                  0.099   ankyrin 1 isoform 4 
ASB9                  0.090   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ASB3                  0.090   ankyrin repeat and SOCS box-containing protein 3 iso...
ANK2                  0.084   ankyrin 2 isoform 3 
ANK2                  0.084   ankyrin 2 isoform 2 
ANK2                  0.084   ankyrin 2 isoform 1 
INVS                  0.082   inversin isoform a 
INVS                  0.082   inversin isoform b 
ANK3                  0.082   ankyrin 3 isoform 1 
ANKRD50               0.080   ankyrin repeat domain 50 
TNKS2                 0.079   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.075   ankyrin repeat and kinase domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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