Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASB3 Sequence: fasta or formatted (518aa) NCBI GI: 7705831
Description:

ankyrin repeat and SOCS box-containing protein 3 isoform a

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [445aa] ankyrin repeat and SOCS box-containing protein 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         49           3
 C cysteine            3.3         17           1
 D aspartate           4.6         24           2
 E glutamate           6.0         31           2
 F phenylalanine       4.1         21           2
 G glycine             5.6         29           2
 H histidine           3.5         18           1
 I isoleucine          6.0         31           2
 K lysine              4.8         25           2
 L leucine            13.7         71           3
 M methionine          1.7          9           1
 N asparagine          5.0         26           1
 P proline             3.7         19           1
 Q glutamine           4.1         21           2
 R arginine            3.5         18           1
 S serine              7.1         37           2
 T threonine           3.9         20           2
 V valine              5.0         26           1
 W tryptophan          1.7          9           1
 Y tyrosine            3.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 3 isof... 
ASB3                  0.858   ankyrin repeat and SOCS box-containing protein 3 iso...
ASB2                  0.162   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ASB15                 0.160   ankyrin repeat and SOCS box-containing 15 
ANK1                  0.130   ankyrin 1 isoform 9 
ANK1                  0.130   ankyrin 1 isoform 1 
ANK1                  0.130   ankyrin 1 isoform 3 
ANK1                  0.130   ankyrin 1 isoform 2 
ANK1                  0.130   ankyrin 1 isoform 4 
ANK2                  0.122   ankyrin 2 isoform 3 
ANK2                  0.122   ankyrin 2 isoform 2 
ANK2                  0.122   ankyrin 2 isoform 1 
ANK3                  0.118   ankyrin 3 isoform 1 
ANKK1                 0.114   ankyrin repeat and kinase domain containing 1 
ASB14                 0.111   ankyrin repeat and SOCS box-containing 14 isoform 1...
ANKRD28               0.100   ankyrin repeat domain 28 
ANKRD50               0.100   ankyrin repeat domain 50 
ANKHD1                0.097   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.097   ANKHD1-EIF4EBP3 protein 
ANKRD44               0.096   ankyrin repeat domain 44 
KIDINS220             0.094   kinase D-interacting substrate of 220 kDa 
ANKRD52               0.094   ankyrin repeat domain 52 
RIPK4                 0.094   ankyrin repeat domain 3 
ANKRD17               0.093   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.093   ankyrin repeat domain protein 17 isoform b 
LOC441869             0.089   hypothetical protein LOC441869 
ANKRD29               0.085   ankyrin repeat domain 29 
TNKS                  0.084   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
DAPK1                 0.083   death-associated protein kinase 1 
TNKS2                 0.083   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press