Guide to the Human Genome
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Name: ASB3 Sequence: fasta or formatted (445aa) NCBI GI: 22208951
Description:

ankyrin repeat and SOCS box-containing protein 3 isoform b

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [518aa] ankyrin repeat and SOCS box-containing protein 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         41           3
 C cysteine            3.4         15           1
 D aspartate           4.3         19           2
 E glutamate           5.8         26           2
 F phenylalanine       4.5         20           2
 G glycine             5.6         25           2
 H histidine           3.6         16           1
 I isoleucine          6.3         28           2
 K lysine              4.5         20           1
 L leucine            14.6         65           3
 M methionine          1.3          6           1
 N asparagine          4.7         21           1
 P proline             4.0         18           1
 Q glutamine           4.5         20           2
 R arginine            3.1         14           1
 S serine              7.2         32           2
 T threonine           3.8         17           2
 V valine              4.5         20           1
 W tryptophan          1.8          8           1
 Y tyrosine            3.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 3 iso... 
ASB3                  1.000   ankyrin repeat and SOCS box-containing protein 3 isof...
ASB15                 0.152   ankyrin repeat and SOCS box-containing 15 
ASB2                  0.146   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ASB14                 0.129   ankyrin repeat and SOCS box-containing 14 isoform 1...
ANK1                  0.119   ankyrin 1 isoform 9 
ANK1                  0.119   ankyrin 1 isoform 1 
ANK1                  0.119   ankyrin 1 isoform 3 
ANK1                  0.119   ankyrin 1 isoform 2 
ANK1                  0.119   ankyrin 1 isoform 4 
ANK2                  0.116   ankyrin 2 isoform 3 
ANK2                  0.116   ankyrin 2 isoform 2 
ANK2                  0.116   ankyrin 2 isoform 1 
ANK3                  0.110   ankyrin 3 isoform 1 
ANKRD28               0.099   ankyrin repeat domain 28 
ANKRD17               0.096   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.096   ankyrin repeat domain protein 17 isoform b 
ANKK1                 0.095   ankyrin repeat and kinase domain containing 1 
RIPK4                 0.095   ankyrin repeat domain 3 
ANKRD52               0.093   ankyrin repeat domain 52 
ANKRD44               0.092   ankyrin repeat domain 44 
ANKRD29               0.091   ankyrin repeat domain 29 
ANKRD50               0.091   ankyrin repeat domain 50 
KIDINS220             0.088   kinase D-interacting substrate of 220 kDa 
ANKHD1                0.087   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.087   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 2 ...
EHMT2                 0.083   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.083   euchromatic histone-lysine N-methyltransferase 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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