Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASB11 Sequence: fasta or formatted (302aa) NCBI GI: 60218887
Description:

ankyrin repeat and SOCS box-containing protein 11 isoform b

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [323aa] ankyrin repeat and SOCS box-containing protein 11 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         34           3
 C cysteine            5.0         15           2
 D aspartate           3.0          9           1
 E glutamate           6.6         20           1
 F phenylalanine       1.7          5           1
 G glycine             7.0         21           2
 H histidine           5.3         16           1
 I isoleucine          3.3         10           1
 K lysine              4.3         13           2
 L leucine            14.2         43           3
 M methionine          0.7          2           1
 N asparagine          5.0         15           2
 P proline             4.0         12           2
 Q glutamine           4.6         14           1
 R arginine            5.6         17           2
 S serine              5.0         15           2
 T threonine           3.3         10           1
 V valine              7.6         23           1
 W tryptophan          1.0          3           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 11 is... 
ASB11                 0.859   ankyrin repeat and SOCS box-containing protein 11 is...
ASB5                  0.460   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ASB9                  0.449   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ASB9                  0.375   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ASB13                 0.288   ankyrin repeat and SOCS box-containing protein 13 [H...
ANK1                  0.130   ankyrin 1 isoform 9 
ANK1                  0.130   ankyrin 1 isoform 1 
ANK1                  0.130   ankyrin 1 isoform 3 
ANK1                  0.130   ankyrin 1 isoform 2 
ANK1                  0.130   ankyrin 1 isoform 4 
ANK2                  0.125   ankyrin 2 isoform 3 
ANK2                  0.125   ankyrin 2 isoform 2 
ANK2                  0.125   ankyrin 2 isoform 1 
ASB1                  0.125   ankyrin repeat and SOCS box-containing protein 1 [Ho...
ANKRD17               0.121   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.121   ankyrin repeat domain protein 17 isoform b 
ANK3                  0.120   ankyrin 3 isoform 1 
ANKHD1                0.120   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.120   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.120   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.120   ANKHD1-EIF4EBP3 protein 
ANKRD28               0.118   ankyrin repeat domain 28 
ASB10                 0.116   ankyrin repeat and SOCS box-containing 10 isoform 2...
DAPK1                 0.113   death-associated protein kinase 1 
TNKS2                 0.111   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.111   ankyrin repeat and kinase domain containing 1 
ANKRD50               0.109   ankyrin repeat domain 50 
ASB7                  0.108   ankyrin repeat and SOCS box-containing protein 7 iso...
TNKS                  0.108   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press