Guide to the Human Genome
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Name: ASB1 Sequence: fasta or formatted (335aa) NCBI GI: 94721248
Description:

ankyrin repeat and SOCS box-containing protein 1

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         29           2
 C cysteine            3.9         13           2
 D aspartate           5.1         17           1
 E glutamate           5.4         18           2
 F phenylalanine       3.0         10           1
 G glycine             8.1         27           2
 H histidine           4.5         15           2
 I isoleucine          2.7          9           1
 K lysine              3.3         11           2
 L leucine            13.1         44           4
 M methionine          0.6          2           1
 N asparagine          3.6         12           1
 P proline             6.0         20           1
 Q glutamine           2.7          9           1
 R arginine            8.7         29           2
 S serine              6.0         20           1
 T threonine           3.3         11           1
 V valine              8.1         27           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 1 [Ho... 
ASB12                 0.244   ankyrin repeat and SOCS box-containing protein 12 [H...
ASB11                 0.111   ankyrin repeat and SOCS box-containing protein 11 is...
ASB11                 0.111   ankyrin repeat and SOCS box-containing protein 11 is...
ASB5                  0.102   ankyrin repeat and SOCS box-containing protein 5 [Ho...
ASB9                  0.099   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ASB2                  0.091   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ASB13                 0.084   ankyrin repeat and SOCS box-containing protein 13 [H...
ASB3                  0.082   ankyrin repeat and SOCS box-containing protein 3 isof...
ANKRD50               0.079   ankyrin repeat domain 50 
ASB10                 0.073   ankyrin repeat and SOCS box-containing 10 isoform 3...
ANK2                  0.073   ankyrin 2 isoform 3 
ANK2                  0.073   ankyrin 2 isoform 2 
ANK2                  0.073   ankyrin 2 isoform 1 
ANKRD42               0.070   ankyrin repeat domain 42 
ANK3                  0.069   ankyrin 3 isoform 1 
ASB3                  0.069   ankyrin repeat and SOCS box-containing protein 3 iso...
ANKRD10               0.067   ankyrin repeat domain 10 
ANK1                  0.067   ankyrin 1 isoform 9 
ANK1                  0.067   ankyrin 1 isoform 1 
ANK1                  0.067   ankyrin 1 isoform 3 
ANK1                  0.067   ankyrin 1 isoform 2 
ANK1                  0.067   ankyrin 1 isoform 4 
FEM1B                 0.066   fem-1 homolog b 
TNNI3K                0.066   TNNI3 interacting kinase isoform b 
TNNI3K                0.066   TNNI3 interacting kinase isoform a 
ANKRD28               0.066   ankyrin repeat domain 28 
ANKK1                 0.064   ankyrin repeat and kinase domain containing 1 
TNKS                  0.064   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
GABPB2                0.063   GA repeat binding protein, beta 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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