Guide to the Human Genome
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Name: ASB5 Sequence: fasta or formatted (329aa) NCBI GI: 18254476
Description:

ankyrin repeat and SOCS box-containing protein 5

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         33           3
 C cysteine            3.3         11           1
 D aspartate           3.3         11           1
 E glutamate           5.5         18           2
 F phenylalanine       3.3         11           1
 G glycine             5.5         18           1
 H histidine           4.0         13           2
 I isoleucine          5.8         19           1
 K lysine              3.6         12           1
 L leucine            14.6         48           3
 M methionine          0.9          3           1
 N asparagine          3.6         12           1
 P proline             4.6         15           1
 Q glutamine           5.8         19           2
 R arginine            4.0         13           1
 S serine              7.6         25           3
 T threonine           4.9         16           1
 V valine              5.2         17           1
 W tryptophan          1.2          4           1
 Y tyrosine            3.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing protein 5 [Ho... 
ASB11                 0.509   ankyrin repeat and SOCS box-containing protein 11 is...
ASB11                 0.427   ankyrin repeat and SOCS box-containing protein 11 is...
ASB9                  0.379   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ASB9                  0.338   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ASB13                 0.285   ankyrin repeat and SOCS box-containing protein 13 [H...
ANK1                  0.135   ankyrin 1 isoform 9 
ANK1                  0.135   ankyrin 1 isoform 1 
ANK1                  0.135   ankyrin 1 isoform 3 
ANK1                  0.135   ankyrin 1 isoform 2 
ANK1                  0.135   ankyrin 1 isoform 4 
ASB10                 0.125   ankyrin repeat and SOCS box-containing 10 isoform 2...
ANK3                  0.121   ankyrin 3 isoform 1 
ANK2                  0.119   ankyrin 2 isoform 3 
ANK2                  0.119   ankyrin 2 isoform 2 
ANK2                  0.119   ankyrin 2 isoform 1 
ASB10                 0.111   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.111   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB3                  0.111   ankyrin repeat and SOCS box-containing protein 3 iso...
ASB3                  0.111   ankyrin repeat and SOCS box-containing protein 3 isof...
DAPK1                 0.110   death-associated protein kinase 1 
ANKRD28               0.110   ankyrin repeat domain 28 
ANKRD17               0.110   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.110   ankyrin repeat domain protein 17 isoform b 
ASB7                  0.110   ankyrin repeat and SOCS box-containing protein 7 iso...
ASB12                 0.108   ankyrin repeat and SOCS box-containing protein 12 [H...
ASB1                  0.106   ankyrin repeat and SOCS box-containing protein 1 [Ho...
ANKHD1                0.105   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.105   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.105   ankyrin repeat and KH domain containing 1 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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