Search of human proteins with 222080058

Search of human proteins with 222080058

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|222080058 Smith-Magenis syndrome chromosome region,
candidate 7 isoform 2 [Homo sapiens]
         (465 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|222080058 Smith-Magenis syndrome chromosome region, candidate...   922   0.0  
gi|22538488 Smith-Magenis syndrome chromosome region, candidate ...   900   0.0  
gi|22129774 hypothetical protein LOC54471 [Homo sapiens]              358   4e-99
gi|222080060 Smith-Magenis syndrome chromosome region, candidate...   203   3e-52
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    40   0.003
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]            39   0.008
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  36   0.085
gi|223890225 POU class 6 homeobox 1 [Homo sapiens]                     35   0.19 
gi|57863314 vacuolar protein sorting 37C [Homo sapiens]                35   0.19 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.25 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.25 
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ...    34   0.25 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    34   0.25 
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ...    34   0.25 
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]               34   0.25 
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  34   0.32 
gi|153792074 proline rich 12 [Homo sapiens]                            34   0.32 
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]                 33   0.42 
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]                 33   0.42 
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    33   0.42 
gi|239743587 PREDICTED: hypothetical protein [Homo sapiens]            33   0.42 
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    33   0.42 
gi|57528101 hypothetical protein LOC728130 [Homo sapiens]              33   0.42 
gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]         33   0.42 
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    33   0.42 
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    33   0.42 
gi|150170710 hypothetical protein LOC728118 [Homo sapiens]             33   0.42 
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]            33   0.55 
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int...    33   0.72 
gi|238859557 regulatory factor X1 [Homo sapiens]                       33   0.72 

>gi|222080058 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 2 [Homo sapiens]
          Length = 465

 Score =  922 bits (2382), Expect = 0.0
 Identities = 465/465 (100%), Positives = 465/465 (100%)

Query: 1   MGLSPNLDRQTMAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKR 60
           MGLSPNLDRQTMAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKR
Sbjct: 1   MGLSPNLDRQTMAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKR 60

Query: 61  FIDRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET 120
           FIDRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET
Sbjct: 61  FIDRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET 120

Query: 121 DPEVTPQLSSPAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFP 180
           DPEVTPQLSSPAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFP
Sbjct: 121 DPEVTPQLSSPAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFP 180

Query: 181 ELPFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQ 240
           ELPFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQ
Sbjct: 181 ELPFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQ 240

Query: 241 LEFCPRGSSPWDRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELL 300
           LEFCPRGSSPWDRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELL
Sbjct: 241 LEFCPRGSSPWDRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELL 300

Query: 301 LEVQHERLELTVAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHD 360
           LEVQHERLELTVAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHD
Sbjct: 301 LEVQHERLELTVAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHD 360

Query: 361 AGTRRRLLLLLCAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLI 420
           AGTRRRLLLLLCAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLI
Sbjct: 361 AGTRRRLLLLLCAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLI 420

Query: 421 GSLEQASLPCHFNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL 465
           GSLEQASLPCHFNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL
Sbjct: 421 GSLEQASLPCHFNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL 465


>gi|22538488 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 1 [Homo sapiens]
          Length = 454

 Score =  900 bits (2325), Expect = 0.0
 Identities = 454/454 (100%), Positives = 454/454 (100%)

Query: 12  MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE 71
           MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE
Sbjct: 1   MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE 60

Query: 72  DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSP 131
           DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSP
Sbjct: 61  DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSP 120

Query: 132 APLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGG 191
           APLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGG
Sbjct: 121 APLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGG 180

Query: 192 PLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQLEFCPRGSSPW 251
           PLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQLEFCPRGSSPW
Sbjct: 181 PLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQLEFCPRGSSPW 240

Query: 252 DRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELLLEVQHERLELT 311
           DRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELLLEVQHERLELT
Sbjct: 241 DRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELLLEVQHERLELT 300

Query: 312 VAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHDAGTRRRLLLLL 371
           VAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHDAGTRRRLLLLL
Sbjct: 301 VAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHDAGTRRRLLLLL 360

Query: 372 CAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLIGSLEQASLPCH 431
           CAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLIGSLEQASLPCH
Sbjct: 361 CAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLIGSLEQASLPCH 420

Query: 432 FNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL 465
           FNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL
Sbjct: 421 FNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL 454


>gi|22129774 hypothetical protein LOC54471 [Homo sapiens]
          Length = 463

 Score =  358 bits (920), Expect = 4e-99
 Identities = 213/466 (45%), Positives = 276/466 (59%), Gaps = 17/466 (3%)

Query: 12  MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRA----TS 67
           MA   +++GK+  D G+G+ +DF+L+NARLVLGVGGAA+LGIATLAVKR  DRA    TS
Sbjct: 1   MAGAGERKGKK-DDNGIGTAIDFVLSNARLVLGVGGAAMLGIATLAVKRMYDRAISAPTS 59

Query: 68  PRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQ 127
           P     +   SW+E + +  +P L  R     LS+ +  L   SS  +      P   P 
Sbjct: 60  PTRLSHSGKRSWEEPNWM-GSPRLLNRDMKTGLSRSLQTLPTDSSTFDTDTFCPPRPKPV 118

Query: 128 LSS------PAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPE 181
                     + L ++LQE+LL + R+R  IPA + A AKQ A DI  EL+++ R+K P+
Sbjct: 119 ARKGQVDLKKSRLRMSLQEKLLTYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPD 178

Query: 182 LPFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQL 241
           +P       G LYD LQ   ADH++L+VPLVLE  LWS +PG DT+   P  + VRR   
Sbjct: 179 MPLRDMYLSGSLYDDLQVVTADHIQLIVPLVLEQNLWSCIPGEDTIMNVPGFFLVRRENP 238

Query: 242 EFCPRGSSPWDRFLVGGYLSSRVLLELLRKALAASVNWPAIGSLLGCLIRPSMASEELLL 301
           E+ PRGSS WDR +VGGYLS + + +   K +A S+NWPAIGSLL  +IRP+   E L L
Sbjct: 239 EYFPRGSSYWDRCVVGGYLSPKTVADTFEKVVAGSINWPAIGSLLDYVIRPAPPPEALTL 298

Query: 302 EVQHER-LELTVAVLVAVPGVDADDRLLLAWPLE-GLAGNLWLQDLYPVEAARLRALDDH 359
           EVQ+ER   L +  L   P V   D +L+A P       NLW   L P E ARLRALD  
Sbjct: 299 EVQYERDKHLFIDFL---PSVTLGDTVLVAKPHRLAQYDNLWRLSLRPAETARLRALDQA 355

Query: 360 DAGTRRRLLLLLCAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELL 419
           D+G R   L +L A+C+   ALG L    LT V+L L ++  DW+ + L +RFLQAL  L
Sbjct: 356 DSGCRSLCLKILKAICKSTPALGHLTASQLTNVILHLAQEEADWSPDMLADRFLQALRGL 415

Query: 420 IGSLEQASLPCHFNPSVNLFSSLREEEIDDIGYALYSGLQEPEGLL 465
           I  LE   LP   NP VNLF+ L  EEID++GY LY  L EPE LL
Sbjct: 416 ISYLEAGVLPSALNPKVNLFAELTPEEIDELGYTLYCSLSEPEVLL 461


>gi|222080060 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 3 [Homo sapiens]
          Length = 205

 Score =  203 bits (516), Expect = 3e-52
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 12  MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE 71
           MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE
Sbjct: 1   MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDE 60

Query: 72  DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAP 114
           DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAP
Sbjct: 61  DDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAP 103


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/45 (37%), Positives = 23/45 (51%)

Query: 89  PHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
           P L P PP  A   P+ P  P +++P  PA+ +PE  P    P P
Sbjct: 796 PPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLP 840


>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
          Length = 1444

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 70  DEDD-TKADSW----KELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEV 124
           DEDD   A  W    +EL ++++   L   PPPA  + P+ P+  SS  P  P+E  P  
Sbjct: 643 DEDDLANALIWPEIQQELKIIESEEELSSLPPPALKTSPIQPILESSLGPFIPSE-PPGS 701

Query: 125 TPQLSSPAPLCLTLQ 139
            P  S PAP+   L+
Sbjct: 702 LPCGSFPAPVSTPLE 716


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 35.8 bits (81), Expect = 0.085
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 29/136 (21%)

Query: 96   PPAALSQPVLPLAPSSSAPEGPAETDPEVTPQ-------------------LSSPAPLCL 136
            PP+  ++P LPLA +SS P   +   P+  PQ                    SSP  + +
Sbjct: 2375 PPSQGTKPALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSASQTPVPSSPLQISM 2434

Query: 137  T-----LQERLLAFERDRVTI--PAAQVALAKQLAGDIALE---LQAYFRSKFPELPFGA 186
            T     L  +LL ++ D+ T+  P  ++    Q    +A +   L + F  +  ++P+  
Sbjct: 2435 TSLQNSLPPQLLQYQCDQCTVAFPTLELWQEHQHMHFLAAQNQFLHSPFLERPMDMPYMI 2494

Query: 187  FVPGGPLYDGLQAGAA 202
            F P  PL  G   G++
Sbjct: 2495 FDPNNPLMTGQLLGSS 2510



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 87   ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
            ++P   P PPP     P LP AP   +  GP +    V+  L +P P
Sbjct: 1953 SSPETPPPPPP----PPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPP 1995


>gi|223890225 POU class 6 homeobox 1 [Homo sapiens]
          Length = 301

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSS--APEGPAETDPEVTPQLSSPAP 133
           AT    P PPP A+ +P  P +P+ S   P  P  T P+    ++SPAP
Sbjct: 57  ATLASSPLPPPVAVRKPSTPESPAKSEVQPIQPTPTVPQPAVVIASPAP 105


>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
          Length = 355

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 35/105 (33%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 92  QPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAPLCLTLQERLLAFERDRVT 151
           QP+PP A    P LP +PS S P GP  T     P    PAP  +  Q    +      T
Sbjct: 193 QPQPPLAMPPYP-LPYSPSPSLPVGP--TAHGALP----PAPFPVVSQPSFYSGPLG-PT 244

Query: 152 IPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGGPLYDG 196
            PAAQ+          + +     R  +P  P GA  PG PL  G
Sbjct: 245 YPAAQLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGG 289


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET-DPEVTPQLSSP 131
           ATP LQ  P P A      P +PS+S P  P  T  P+  P L++P
Sbjct: 524 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 569



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 87  ATPHLQP-RPPPAALSQPVLPLAPSSSAPEG-PAETDPEVTPQLSSPAPLCLTLQERLLA 144
           ATP   P R  P+A   P  P  PS   P+G  A   P+VTP     AP    L    LA
Sbjct: 246 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET-DPEVTPQLSSP 131
           ATP LQ  P P A      P +PS+S P  P  T  P+  P L++P
Sbjct: 793 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 838



 Score = 33.1 bits (74), Expect = 0.55
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 88  TPHLQ--PRPPPAALSQPVLPL-APSSSAPEGPAETDPEVTPQLSSP 131
           TPHL+  P P P  L  P  PL  P    P   A   P+  P L+SP
Sbjct: 555 TPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASP 601



 Score = 32.3 bits (72), Expect = 0.94
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAPL 134
           ATP  Q  PPP A     +P +P +S P  P+ T P   P L +  PL
Sbjct: 720 ATPPPQA-PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPL 766



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSP 131
           A P LQ   PPA+L+ P L   PS + P     + P  TP L +P
Sbjct: 519 APPSLQT--PPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETP 561



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 87  ATPHLQP-RPPPAALSQPVLPLAPSSSAPEG-PAETDPEVTPQLSSPAPLCLTLQERLLA 144
           ATP   P R  P+A   P  P  PS   P+G  A   P+VTP     AP    L    LA
Sbjct: 246 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305



 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 87  ATPHLQPRPPPAALSQPV-LPLAPSSSAPEGP-AETDPEVTPQLSSP 131
           ATP   PR PP   + P+ +P +P +S P  P A+  P+  P L++P
Sbjct: 751 ATP--PPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATP 795


>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
           sapiens]
          Length = 261

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 10/64 (15%)

Query: 82  LSLLKATPHLQPRPPPAALSQP---------VLPLAPSSSAPEGPAETDPEVTP-QLSSP 131
           L L+   P LQP PPP +  +P           P  P+ S   GP  + P   P     P
Sbjct: 168 LMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPP 227

Query: 132 APLC 135
           +P C
Sbjct: 228 SPAC 231


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET-DPEVTPQLSSP 131
           ATP LQ  P P A      P +PS+S P  P  T  P+  P L++P
Sbjct: 485 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 530



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 87  ATPHLQP-RPPPAALSQPVLPLAPSSSAPEG-PAETDPEVTPQLSSPAPLCLTLQERLLA 144
           ATP   P R  P+A   P  P  PS   P+G  A   P+VTP     AP    L    LA
Sbjct: 237 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 296


>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
           sapiens]
          Length = 261

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 10/64 (15%)

Query: 82  LSLLKATPHLQPRPPPAALSQP---------VLPLAPSSSAPEGPAETDPEVTP-QLSSP 131
           L L+   P LQP PPP +  +P           P  P+ S   GP  + P   P     P
Sbjct: 168 LMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPP 227

Query: 132 APLC 135
           +P C
Sbjct: 228 SPAC 231


>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
          Length = 464

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 89  PHLQPRPPPAALSQPVLP-LAPSSSAPEGPAETDPEVTPQLSSPAPL 134
           P   P PPP  L  P +P   P+ S P GP +  P   P +  PAP+
Sbjct: 248 PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPP-APGVHPPAPV 293



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 13/64 (20%)

Query: 83  SLLKATPHLQPRPPPAALSQPVLPLAPSS-------------SAPEGPAETDPEVTPQLS 129
           SL    P ++  PPP     P  P  P S               P GPA + P   PQL 
Sbjct: 222 SLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLP 281

Query: 130 SPAP 133
            PAP
Sbjct: 282 PPAP 285


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 63  DRATSPRDEDDTKADSWKELSLLKAT-----PHLQPRPPPAALSQPVLPLAPSSSAPEGP 117
           DRA  PR    T   +    + L+ T     P  + RPP    + PV P  P  +A  G 
Sbjct: 10  DRAFRPRGATPTCTPAQPSWARLRPTRPPEPPSTRQRPPGPRENSPVAPGPPGGAAAPGG 69

Query: 118 AETDPEVTPQLSSP 131
           A T P+ T   + P
Sbjct: 70  AGTTPQGTATAAKP 83


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 93   PRPPPAALSQPVLP----LAPSSSAPEGPAETDPEVTPQLSSPAPLCLTLQERLLA 144
            P PPP A+  P  P     AP ++ PE PA   PE  P+L    PL L  ++   A
Sbjct: 1502 PPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPE-DPELPDTRPLHLAKKQETAA 1556



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 88   TPHLQPRPPPA----ALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
            TP  QP PPP     AL  P   +AP+ S+P  P    P   P + SP P
Sbjct: 1466 TPQPQPPPPPPPPQPALPSPPPLVAPTPSSPP-PPPLPPPPPPAMPSPPP 1514



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 81   ELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
            E  LL+  P   P PPPA   QP  P  P    P  P+   P V P  SSP P
Sbjct: 1449 EPPLLEEKP--PPTPPPAPTPQPQPPPPPPPPQPALPS-PPPLVAPTPSSPPP 1498



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 95   PPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
            PPP A + P  P  P  +  E P    PE TP+ + P P
Sbjct: 1692 PPPKAPAPPPKPETPEKTTSEKP----PEQTPETAMPEP 1726


>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
          Length = 768

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 63  DRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDP 122
           D    P   DD+ A ++K        P L P  P  AL  P+L     +  P  P E   
Sbjct: 652 DLVPEPTTGDDSDAATFKP-----TLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPT 706

Query: 123 EVTPQ-LSSPAPL 134
           E +P+    PAP+
Sbjct: 707 EASPEPAPDPAPV 719


>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
          Length = 737

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 63  DRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDP 122
           D    P   DD+ A ++K        P L P  P  AL  P+L     +  P  P E   
Sbjct: 621 DLVPEPTTGDDSDAATFKP-----TLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPT 675

Query: 123 EVTPQ-LSSPAPL 134
           E +P+    PAP+
Sbjct: 676 EASPEPAPDPAPV 688


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 87  ATPHLQPRPPPA--ALSQPVLPLAPSSSAPEGPAETDPEVTPQ 127
           ATP L+PR PPA   + QPV    PS + P+ P    P   PQ
Sbjct: 432 ATPRLEPRGPPAPEVVKQPV--YLPSKAGPKAPTACLPPPRPQ 472


>gi|239743587 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 236

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 82  LSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEG-----PAETDPEVTPQLSSPAPLCL 136
           L+L   TP    +PPP   S  VLP+ P + +P+G      +++  +++ +LS   P   
Sbjct: 34  LALRYLTPAYLAQPPPPPSSSCVLPIQPPAISPKGIFSGLGSQSINDLSGELSLTPPGTP 93

Query: 137 TLQER-LLAFE----RDRVTIPAAQVALAKQL 163
            LQ R L+A +    R R+ +P    +  K++
Sbjct: 94  VLQSRALMALKHCEARKRLKLPLESASTLKEI 125


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 8/46 (17%)

Query: 95   PPPAALSQPVLPLAPSSSAPEGPAE------TDPEVTPQLSSPAPL 134
            PPP   S P  PLAPS ++P  P E      T+P   P + SP PL
Sbjct: 4909 PPPEEPSPPPSPLAPSPASP--PTEPLVELPTEPLAEPPVPSPLPL 4952



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 82   LSLLKATPHL-QPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAPLCLTLQE 140
            LS L   P L +P  PP +     LPL+PS          +P ++PQL  P PL   L  
Sbjct: 891  LSPLLGEPALSEPGEPPLSPLPEELPLSPSG---------EPSLSPQLMPPDPLPPPLSP 941

Query: 141  RLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGGPLYDGLQAG 200
             + A         AA  AL+    G++     A   S  PE P  A +   P+    +A 
Sbjct: 942  IITA---------AAPPALSP--LGELEYPFGAKGDSD-PESPLAAPILETPISPPPEAN 989

Query: 201  AADHVRLLVPLVLEPGLWSLVPGVDTVARDP 231
              D    + P++L P   S V     +  +P
Sbjct: 990  CTD-PEPVPPMILPPSPGSPVGPASPILMEP 1019


>gi|57528101 hypothetical protein LOC728130 [Homo sapiens]
          Length = 557

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 87  ATPHLQPRPPPA--ALSQPVLPLAPSSSAPEGPAETDPEVTPQ 127
           ATP L+PR PPA   + QPV    PS + P+ P    P   PQ
Sbjct: 360 ATPRLEPRGPPAPEVVKQPV--YLPSKAGPKAPTACLPPPRPQ 400


>gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]
          Length = 757

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 87  ATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAE--TDPEVTPQLSSPAP 133
           A P L P   P   + P+ P  P S AP+ P E    P++   L SPAP
Sbjct: 616 ALPTLLPSQSPTNQTSPISPTHPHSKAPQIPREDGPSPKLALWLPSPAP 664


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 68   PRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTP- 126
            P+D  D        +S ++AT       PP  L  PV  L   +  P  P  + PE TP 
Sbjct: 1481 PQDSQDLVLGGDVPISSIQATIAKLSIRPPGGLESPVASLPGPAEPPGLPPASLPESTPI 1540

Query: 127  QLSSPAPLCLTLQE 140
              SSP PL   L E
Sbjct: 1541 PSSSPPPLSSPLPE 1554


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 16/38 (42%), Positives = 18/38 (47%)

Query: 95  PPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPA 132
           P P A   P  PL P S  PEGP    P + P  +S A
Sbjct: 850 PAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSA 887


>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
          Length = 878

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 87  ATPHLQPRPPPA--ALSQPVLPLAPSSSAPEGPAETDPEVTPQ 127
           ATP L+PR PPA   + QPV    PS + P+ P    P   PQ
Sbjct: 432 ATPRLEPRGPPAPEVVKQPV--YLPSKAGPKAPTACLPPPRPQ 472


>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 389

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 79  WKELSLL---------KATPHLQPRPPPAALS-QPVLPLAPSSSAPEG---PAETDPEVT 125
           W+EL+L           ++PH   RPPP A+  +P  P   S + P G     E  P   
Sbjct: 96  WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYAL 155

Query: 126 PQLSSPAP 133
           P   SPAP
Sbjct: 156 PPRESPAP 163


>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
           interacting protein [Homo sapiens]
          Length = 1211

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 17/45 (37%), Positives = 20/45 (44%)

Query: 89  PHLQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAP 133
           P L P PPP        P + SS    GPA+   +   QLS P P
Sbjct: 752 PPLSPPPPPPLPFHDAKPSSRSSDGSRGPAQALAKPLTQLSHPVP 796


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 86  KATPHLQPRPPPAALSQPVLPLAPSSSAPEGPAET-DPEVTPQLSSPAP 133
           +A P  QP+PPP     P  P AP    P   A T  P+   +L SP P
Sbjct: 20  QAPPQAQPQPPP-----PPPPAAPQPPQPPTAAATPQPQYVTELQSPQP 63


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,929,468
Number of Sequences: 37866
Number of extensions: 957269
Number of successful extensions: 6675
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 5782
Number of HSP's gapped (non-prelim): 1028
length of query: 465
length of database: 18,247,518
effective HSP length: 106
effective length of query: 359
effective length of database: 14,233,722
effective search space: 5109906198
effective search space used: 5109906198
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.