Guide to the Human Genome
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Search of human proteins with 115334677

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo
sapiens]
         (1257 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sa...  2488   0.0  
gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo s...  2328   0.0  
gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ...  2189   0.0  
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]    925   0.0  
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]    773   0.0  
gi|5453638 AT rich interactive domain 3B [Homo sapiens]                85   4e-16
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]         84   6e-16
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]         84   6e-16
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s...    83   2e-15
gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapi...    79   4e-14
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    75   3e-13
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   72   3e-12
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    72   4e-12
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    72   4e-12
gi|47078224 AT rich interactive domain 5A [Homo sapiens]               71   6e-12
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                70   1e-11
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    70   2e-11
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    70   2e-11
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    69   4e-11
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    69   4e-11
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap...    68   5e-11
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap...    68   5e-11
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    67   8e-11
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    67   8e-11
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    67   1e-10
gi|71061468 centromere protein E [Homo sapiens]                        67   1e-10
gi|87299628 biorientation of chromosomes in cell division 1-like...    65   3e-10
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     65   4e-10
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       65   4e-10
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    65   5e-10

>gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo
            sapiens]
          Length = 1257

 Score = 2488 bits (6448), Expect = 0.0
 Identities = 1257/1257 (100%), Positives = 1257/1257 (100%)

Query: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60
            MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL
Sbjct: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60

Query: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120
            RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
Sbjct: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120

Query: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180
            DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS
Sbjct: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180

Query: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240
            VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES
Sbjct: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240

Query: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300
            ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE
Sbjct: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300

Query: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360
            EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID
Sbjct: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360

Query: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420
            SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE
Sbjct: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420

Query: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480
            KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI
Sbjct: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480

Query: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540
            KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK
Sbjct: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540

Query: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600
            DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE
Sbjct: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600

Query: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660
            IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE
Sbjct: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660

Query: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720
            RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE
Sbjct: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720

Query: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780
            LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE
Sbjct: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780

Query: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
            EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS
Sbjct: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
            ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF
Sbjct: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900

Query: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960
            EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH
Sbjct: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960

Query: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020
            EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK
Sbjct: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020

Query: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080
            SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS
Sbjct: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080

Query: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARS 1140
            GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARS
Sbjct: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARS 1140

Query: 1141 PARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY 1200
            PARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY
Sbjct: 1141 PARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY 1200

Query: 1201 MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257
            MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR
Sbjct: 1201 MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257


>gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo
            sapiens]
          Length = 1203

 Score = 2328 bits (6033), Expect = 0.0
 Identities = 1195/1257 (95%), Positives = 1199/1257 (95%), Gaps = 54/1257 (4%)

Query: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60
            MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL
Sbjct: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60

Query: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120
            RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
Sbjct: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120

Query: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180
            DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS
Sbjct: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180

Query: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240
            VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES
Sbjct: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240

Query: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300
            ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE
Sbjct: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300

Query: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360
            EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID
Sbjct: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360

Query: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420
            SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE
Sbjct: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420

Query: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480
            KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI
Sbjct: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480

Query: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540
            KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK
Sbjct: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540

Query: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600
            DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE
Sbjct: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600

Query: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660
            IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE
Sbjct: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660

Query: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720
            RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE
Sbjct: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720

Query: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780
            LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE
Sbjct: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780

Query: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
            EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS
Sbjct: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
            ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF
Sbjct: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900

Query: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960
            EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH
Sbjct: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960

Query: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020
            EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK
Sbjct: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020

Query: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080
            SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS
Sbjct: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080

Query: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARS 1140
            GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNS++                  
Sbjct: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSNEL----------------- 1123

Query: 1141 PARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY 1200
                               + NS+ R                   ISFLQEKLQEIRKYY
Sbjct: 1124 ------------------DNMNSTER-------------------ISFLQEKLQEIRKYY 1146

Query: 1201 MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257
            MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR
Sbjct: 1147 MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1203


>gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo
            sapiens]
          Length = 1188

 Score = 2189 bits (5673), Expect = 0.0
 Identities = 1135/1257 (90%), Positives = 1151/1257 (91%), Gaps = 69/1257 (5%)

Query: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60
            MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL
Sbjct: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60

Query: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120
            RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
Sbjct: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120

Query: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180
            DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS
Sbjct: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS 180

Query: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240
            VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES
Sbjct: 181  VVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLPES 240

Query: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300
            ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE
Sbjct: 241  ELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEE 300

Query: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360
            EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID
Sbjct: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360

Query: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420
            SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE
Sbjct: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420

Query: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480
            KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI
Sbjct: 421  KKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSI 480

Query: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540
            KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK
Sbjct: 481  KKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDK 540

Query: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600
            DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE
Sbjct: 541  DSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE 600

Query: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660
            IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE
Sbjct: 601  IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEE 660

Query: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720
            RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE
Sbjct: 661  RQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDE 720

Query: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780
            LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE
Sbjct: 721  LEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780

Query: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
            EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS
Sbjct: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
            ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF
Sbjct: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900

Query: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960
            EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH
Sbjct: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960

Query: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020
            EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK
Sbjct: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVK 1020

Query: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080
            SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS
Sbjct: 1021 SESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNS 1080

Query: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARS 1140
            GLMAKKQKRTPKRTSAAAKNEKNGT +         LDN +    +  L   K Q++ + 
Sbjct: 1081 GLMAKKQKRTPKRTSAAAKNEKNGTDE---------LDNMNSTERISFLQ-EKLQEIRKY 1130

Query: 1141 PARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY 1200
               +   +   ++ + R                               L++K +E+    
Sbjct: 1131 YMSLKSEVATIDRRRKR-------------------------------LKKKDREVSHAG 1159

Query: 1201 MSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257
             S+ S                   S  G S SS           SSPPQNVLAVECR
Sbjct: 1160 ASMSS-----------------ASSDTGMSPSS-----------SSPPQNVLAVECR 1188


>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
          Length = 1312

 Score =  925 bits (2391), Expect = 0.0
 Identities = 597/1346 (44%), Positives = 798/1346 (59%), Gaps = 123/1346 (9%)

Query: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60
            MKA DEP YLTVGTDVSAKYRGAFCEAKIKT KRLVKVKV  + D++T  VQDD +KGPL
Sbjct: 1    MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPL 60

Query: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120
            +VGAIVE +  DG++QEA+I+KLTDASWYTVVFDDGDE+TLRR+SLCLKGERHFAESETL
Sbjct: 61   KVGAIVEVKNLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETL 120

Query: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSS-LPVTEDEKEEESSEEEDEDKRRLNDELLGKVV 179
            DQLPLTNPEHFGTPVI KKTNRGRRS+ +P   +E+   SS +EDED R+  DELLGKVV
Sbjct: 121  DQLPLTNPEHFGTPVIGKKTNRGRRSNHIP---EEESSSSSSDEDEDDRKQIDELLGKVV 177

Query: 180  SVVSAT---ERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILN 236
             V   +   ++  W+PALV+ P C+D+I VKKD  LVRSF D KF S+ RKD+ E+    
Sbjct: 178  CVDYISLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDT 237

Query: 237  LPESELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAK 296
             P+ +   K   ++A  F K+R +P NWK ++ E   SS +++E+   EE D+EKEKE  
Sbjct: 238  APKPDAVLKQAFEQALEFHKSRTIPANWKTELKEDSSSSEAEEEE---EEEDDEKEKEDN 294

Query: 297  KTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGC 356
             +EEE  E E  PEER+NFLQQLYKFMEDRGTPINK PVLGY++LNLFKLFRLV+  GG 
Sbjct: 295  SSEEE-EEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGF 353

Query: 357  DNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPK 416
            DNI+SGAVWKQ+Y DLGIP+LNSAA YNVK AY+KYLYGFEEYCRSANI+F+ +   E  
Sbjct: 354  DNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQ-MALPEKV 412

Query: 417  VKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESE-REEIE----LKSPRGRR 471
            V ++ K+ E   E  +K + E  + E+K E E NI    E    +EIE    +K   G +
Sbjct: 413  VNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGSK 472

Query: 472  RIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKK 531
            +    + SI    ++EK  +  K  D EN D  DD  T   +   + +  +    +   +
Sbjct: 473  K--NLLESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDE 530

Query: 532  IKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKI 591
              K+ED D +  EEEE+ +E EE E   D +   +EE+ E    G KV+V+YGRGK QK+
Sbjct: 531  TNKEEDEDDEEAEEEEEEEEEEEDE---DDDDNNEEEEFECYPPGMKVQVRYGRGKNQKM 587

Query: 592  YEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDS 651
            YEASIK ++++ GEVLYLVHY GWNVRYDEW+KAD+I+ P DK  PK K +KK KNK D 
Sbjct: 588  YEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDK 647

Query: 652  E--KDEKRDEERQKSKR-GRPPLKSTLSSNMPYGLSKT------------------ANSE 690
            E  KDEK   +  K +R  +PP ++  S  M   L  T                   N  
Sbjct: 648  EKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLTDAKNSDTAHIKSIEITSILNGL 707

Query: 691  GKSDSCSSDSETED----------ALEKNLINEELSLKDELEKNENLNDDKLDEENP--- 737
              S+S + DSE ED            E++ I+   + +++L   E  N   L EEN    
Sbjct: 708  QASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEENKVHA 767

Query: 738  --KISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKE-AEKSPKGKG 794
               IS  + K  +R + + +E L  +    E  V       +K ++VKK+  +KS K + 
Sbjct: 768  DLVISKPVSKSPERLR-KDIEVLSEDTDYEEDEV------TKKRKDVKKDTTDKSSKPQI 820

Query: 795  RRSKTKDLSL-EIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEK 853
            +R K +  +  E +K  S G+ E       +A + E   ++N + SS+ EDE +   K  
Sbjct: 821  KRGKRRYCNTEECLKTGSPGKKEE------KAKNKESLCMENSSNSSSDEDEEETKAKMT 874

Query: 854  KLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPS 913
              K K  G     K +R        + V+++R      S+  + L   +  +R++     
Sbjct: 875  PTK-KYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSD--ERLQNSRAKDRKDVWSSI 931

Query: 914  LIAESNQCIQQLTSERFDSPAEETVNIPLKED---EDAMPLIGPETLVCHEVDLDDLD-- 968
                  + +++L S+  D+ A  +   P  E+   E+++  +  E      V+L+     
Sbjct: 932  QGQWPKKTLKELFSDS-DTEAAASPPHPAPEEGVAEESLQTVAEEESCSPSVELEKPPPV 990

Query: 969  EKDKTSIEDVAVE---------SSESNSLVSIPPALPPV-----------VQHNFSVASP 1008
              D   IE+  VE         SS SNS+++ PP  P              Q + +V+ P
Sbjct: 991  NVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSRQQSSVTVSEP 1050

Query: 1009 LTLSQDESRSVKSESDITIEVDSIAEESQEGLCE-RESANGFETNVASGTCSIIVQERES 1067
            L  +Q+E RS+KSE+D TIEVDS+A E Q+   E   S  GF+ +V+S + +    E E 
Sbjct: 1051 LAPNQEEVRSIKSETDSTIEVDSVAGELQDLQSEGNSSPAGFDASVSSSSSN--QPEPEH 1108

Query: 1068 REK---GQKRPSDG-NSGLMAKKQKRTPKRTSAAAKNEKNGTG-QSSDSEDLPVLDNSSK 1122
             EK   GQKR  D    G  +KKQKR+ K T     N+K G G  SSDSE+L   ++ +K
Sbjct: 1109 PEKACTGQKRVKDAQGGGSSSKKQKRSHKAT--VVNNKKKGKGTNSSDSEELSAGESITK 1166

Query: 1123 CTPVKHLNVSKPQKLARSPARI-SPHI--KDGEKDKHREKHPNSSPRTYKWSFQLNELDN 1179
              PVK ++        +SPAR  SP    K+G+KD   ++  N  P+ YKWSFQ+++L+N
Sbjct: 1167 SQPVKSVSTGMKSHSTKSPARTQSPGKCGKNGDKDPDLKEPSNRLPKVYKWSFQMSDLEN 1226

Query: 1180 MNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSD-- 1237
            M S ERI+ LQEKLQEIRK+Y+SLKSEVA+IDRRRKRLKKK+RE +   +S SS SS   
Sbjct: 1227 MTSAERITILQEKLQEIRKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSI 1286

Query: 1238 ------TGMSPSSSSPPQNVLAVECR 1257
                  T   PS SS  QN ++VECR
Sbjct: 1287 TAAVMLTLAEPSMSSASQNGMSVECR 1312


>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
          Length = 1226

 Score =  773 bits (1997), Expect = 0.0
 Identities = 531/1313 (40%), Positives = 739/1313 (56%), Gaps = 143/1313 (10%)

Query: 1    MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL 60
            MKA DEP YLTVGTDVSAKYRGAFCEAKIKT KRLVKVKV  + D++T  VQDD +KGPL
Sbjct: 1    MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPL 60

Query: 61   RVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL 120
            +VGAIVE +  DG++QEA+I+KLTDASWYTVVFDDGDE+TLRR+SLCLKGERHFAESETL
Sbjct: 61   KVGAIVEVKNLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETL 120

Query: 121  DQLPLTNPEHFGTPVIAKKTNRGRRSS-LPVTEDEKEEESSEEEDEDKRRLNDELLGKVV 179
            DQLPLTNPEHFGTPVI KKTNRGRRS+ +P   +E+   SS +EDED R+  DELLGKVV
Sbjct: 121  DQLPLTNPEHFGTPVIGKKTNRGRRSNHIP---EEESSSSSSDEDEDDRKQIDELLGKVV 177

Query: 180  SVVSAT---ERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDILN 236
             V   +   ++  W+PALV+ P C+D+I VKKD  LVRSF D KF S+ RKD+ E+    
Sbjct: 178  CVDYISLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDT 237

Query: 237  LPESELSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAK 296
             P+ +   K   ++A  F K+R +P NWK ++ E   SS +++E+   EE D+EKEKE  
Sbjct: 238  APKPDAVLKQAFEQALEFHKSRTIPANWKTELKEDSSSSEAEEEE---EEEDDEKEKEDN 294

Query: 297  KTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGC 356
             +EEE  E E  PEER+NFLQQLYKFMEDRGTPINK PVLGY++LNLFKLFRLV+  GG 
Sbjct: 295  SSEEE-EEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGF 353

Query: 357  DNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPK 416
            DNI+SGAVWKQ+Y DLGIP+LNSAA YNVK AY+KYLYGFEEYCRSANI+F+ +   E  
Sbjct: 354  DNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQ-MALPEKV 412

Query: 417  VKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESE-REEIE----LKSPRGRR 471
            V ++ K+ E   E  +K + E  + E+K E E NI    E    +EIE    +K   G +
Sbjct: 413  VNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGSK 472

Query: 472  RIARDVNSIKKEIEEEKTEDKLKDNDTEN-KDVDDDYETAEKKENELLLGRKNTPKQKEK 530
            +    + SI    ++EK  +  K  D EN  D DDD    ++  N  +   +   K    
Sbjct: 473  K--NLLESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGYD 530

Query: 531  KIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEE-DMEPCLTGTKVKVKYGRGKTQ 589
            +  K +   + +D+   K + R++ ++K D E ++DE+   + C      K  +    + 
Sbjct: 531  EWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSP 590

Query: 590  KIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKE 649
            ++    +   ++ D +     H           +K+  I   L+        +    + E
Sbjct: 591  EM----VSKLDLTDAKNSDTAH-----------IKSIEITSILN------GLQASESSAE 629

Query: 650  DSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKN 709
            DSE++++R  +   +          L++N    +SK             +  +   LE+N
Sbjct: 630  DSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISK------------EEQNSSSLLEEN 677

Query: 710  LINEELSLKDELEKN-ENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQI 768
             ++ +L +   + K+ E L  D                        +E L  +    E  
Sbjct: 678  KVHADLVISKPVSKSPERLRKD------------------------IEVLSEDTDYEEDE 713

Query: 769  VQIFGNKMEKTEEVKKE-AEKSPKGKGRRSKTKDLSL-EIIKISSFGQNEAGSEPHIEAH 826
            V       +K ++VKK+  +KS K + +R K +  +  E +K  S G+ E       +A 
Sbjct: 714  V------TKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEE------KAK 761

Query: 827  SLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERT 886
            + E   ++N + SS+ EDE +   K    K K  G     K +R        + V+++R 
Sbjct: 762  NKESLCMENSSNSSSDEDEEETKAKMTPTK-KYNGLEEKRKSLRTTGFYSGFSEVAEKRI 820

Query: 887  SDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKED- 945
                 S+  + L   +  +R++           + +++L S+  D+ A  +   P  E+ 
Sbjct: 821  KLLNNSD--ERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDS-DTEAAASPPHPAPEEG 877

Query: 946  --EDAMPLIGPETLVCHEVDLDDLD--EKDKTSIEDVAVE---------SSESNSLVSIP 992
              E+++  +  E      V+L+       D   IE+  VE         SS SNS+++ P
Sbjct: 878  VAEESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTP 937

Query: 993  PALPPV-----------VQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGLC 1041
            P  P              Q + +V+ PL  +Q+E RS+KSE+D TIEVDS+A E Q+   
Sbjct: 938  PTTPESPSSVTVTEGSRQQSSVTVSEPLAPNQEEVRSIKSETDSTIEVDSVAGELQDLQS 997

Query: 1042 E-RESANGFETNVASGTCSIIVQERESREK---GQKRPSDG-NSGLMAKKQKRTPKRTSA 1096
            E   S  GF+ +V+S + +    E E  EK   GQKR  D    G  +KKQKR+ K T  
Sbjct: 998  EGNSSPAGFDASVSSSSSN--QPEPEHPEKACTGQKRVKDAQGGGSSSKKQKRSHKAT-- 1053

Query: 1097 AAKNEKNGTG-QSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARI-SPHI--KDGE 1152
               N+K G G  SSDSE+L   ++ +K  PVK ++        +SPAR  SP    K+G+
Sbjct: 1054 VVNNKKKGKGTNSSDSEELSAGESITKSQPVKSVSTGMKSHSTKSPARTQSPGKCGKNGD 1113

Query: 1153 KDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDR 1212
            KD   ++  N  P+ YKWSFQ+++L+NM S ERI+ LQEKLQEIRK+Y+SLKSEVA+IDR
Sbjct: 1114 KDPDLKEPSNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASIDR 1173

Query: 1213 RRKRLKKKDREVSHAGASMSSASSD--------TGMSPSSSSPPQNVLAVECR 1257
            RRKRLKKK+RE +   +S SS SS         T   PS SS  QN ++VECR
Sbjct: 1174 RRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPSMSSASQNGMSVECR 1226


>gi|5453638 AT rich interactive domain 3B [Homo sapiens]
          Length = 560

 Score = 85.1 bits (209), Expect = 4e-16
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 32/198 (16%)

Query: 219 SKFYSIARKDIKEVDILNLPESELSTKPGL---------------QKASIFLKTRVVPDN 263
           SK++ + +  +   D    P S L   PGL                KAS  + T   P N
Sbjct: 119 SKYFHVQK--VARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQP-N 175

Query: 264 WKMDISEILESSS----SDDEDGPAEENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQL 319
           W +D  E L+ +     SDD DG        + +E  +   ++ E + DPE ++ FL  L
Sbjct: 176 WNLD--EQLKQNGGLAWSDDADGG-------RGREISRDFAKLYELDGDPERKE-FLDDL 225

Query: 320 YKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNS 379
           + FM+ RGTPIN+ P++  + L+L+ L++LV  +GG   I +  +W++I   L +P   +
Sbjct: 226 FVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSIT 285

Query: 380 AASYNVKTAYRKYLYGFE 397
           +A++ ++T Y KYLY +E
Sbjct: 286 SAAFTLRTQYMKYLYAYE 303


>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
          Length = 2039

 Score = 84.3 bits (207), Expect = 6e-16
 Identities = 136/685 (19%), Positives = 257/685 (37%), Gaps = 141/685 (20%)

Query: 409  TVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPR 468
            T   H  K +  K++ ++  +E+ K  +E  + ++K E  ENI ++ +SE   + + +  
Sbjct: 713  TKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEE-RENIPTDKDSEFTSLGMSAIE 771

Query: 469  GRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQK 528
                 +  ++ ++KEI+ EK E  +K++                               K
Sbjct: 772  E----SIGLHLVEKEIDIEKQEKHIKES-------------------------------K 796

Query: 529  EKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKT 588
            EK  K+ +  +KD ++ E K+ E+E+ + K + + E+D+ D+  C+   K K K     T
Sbjct: 797  EKPEKRSQIKEKDIEKMERKTFEKEK-KIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHT 855

Query: 589  QKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNK 648
            +K ++   KS                                 + K   ++K ++K   K
Sbjct: 856  EKCHKEGEKSKNTA----------------------------AIKKTDDREKSREKMDRK 887

Query: 649  EDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEK 708
             D EK EK     +  ++     K+  S N  Y  S+   ++ K        ++ D    
Sbjct: 888  HDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESI 947

Query: 709  NLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRTQMQPLET----------- 757
            N+ N +  +++E +K+  ++ +K   E P      L   ++T+ +PL+T           
Sbjct: 948  NITNSK-HIQEE-KKSSIVDGNKAQHEKP------LSLKEKTKDEPLKTPDGKEKDKKDK 999

Query: 758  ---LKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQ 814
                  E  +++  +QI      K+E  K + + SP  K  R K K L  + +  +SF  
Sbjct: 1000 DIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSF-- 1057

Query: 815  NEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQ-----CVKEK---KLKRKILGQSSPE 866
                 E  +    LE+     K+     + E ++     C++ K   K K K     S  
Sbjct: 1058 -----ERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKN 1112

Query: 867  KKIRIENGMEMTNTVSQERTSD----------------CIGSEGMKNLNFEQHFERENEG 910
            K++      E+T+  ++E+                    +G     + N      R    
Sbjct: 1113 KELTRSKSSEVTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENE 1172

Query: 911  MPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDLDEK 970
             P L + S   I   +SE        T   P++ D D M       L   E  +      
Sbjct: 1173 KPGLSSRSVSMISVASSEDSCHTTVTTPRPPVEYDSDFM-------LESSESQMSFSQSP 1225

Query: 971  DKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEV- 1029
              +  +  A+   E +SL  +P  + P   +  S +   + S ++ + + SE   TIEV 
Sbjct: 1226 FLSIAKSPALHERELDSLADLPERIKPPYANRLSTSHLRSSSVEDVKLIISEGRPTIEVR 1285

Query: 1030 ---------------DSIAEESQEG 1039
                            +I+EES +G
Sbjct: 1286 RCSMPSVICEHTKQFQTISEESNQG 1310



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 180/913 (19%), Positives = 349/913 (38%), Gaps = 181/913 (19%)

Query: 419  EEKKDLEESMEEALKLDQEMPLT----------EVKSEPEENIDSNSESEREEIELKSPR 468
            E   D+ E+ E  L L +E+PL+          E +S    ++D N +SE E+  L    
Sbjct: 262  ERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICE- 320

Query: 469  GRRRIARDVNSIKKEIEEEKTEDKLKDNDTE--NKDVDDDY--ETAEKKENELLLGRKNT 524
                 ++ +   K  +     E + KD+D E  NK +DD +     ++KENE    + + 
Sbjct: 321  -----SKQILPSKTPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHL 375

Query: 525  PKQKEK-------KIKKQEDSD---KDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCL 574
              ++EK       K KKQ+ S      ++  +E++ + ++  + C    E    DM+   
Sbjct: 376  FAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQ--- 432

Query: 575  TGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDK 634
                         T+K Y  S        GE                             
Sbjct: 433  -------------TKKEYVVS--------GE----------------------------- 442

Query: 635  GGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKST-LSSNMPYGLSKTANSEG-- 691
                 KQK K K K  ++   K ++E ++ K G+   + T L+ N     S+    EG  
Sbjct: 443  ----HKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNF 498

Query: 692  ------KSD----------------SCSSDSETEDALEKNLI-------NEELSLKDELE 722
                  K D                SC    +    L++          + E+SL+ +L 
Sbjct: 499  RKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLV 558

Query: 723  KNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGE-------NEQIVQIFGN- 774
            + +N   + L E +   S    K  ++++ Q  +   LE GE       +E     F N 
Sbjct: 559  RYDNTESEFLPESS---SVKSCKHKEKSKHQ--KDFHLEFGEKSNAKIKDEDHSPTFENS 613

Query: 775  -----------------KMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEA 817
                             K++  E  K++ +K  +G+  + KTKD + E+ +   F   E 
Sbjct: 614  DCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEF-DREF 672

Query: 818  GSEPHIEAHSLE--LSSLDNKNFSSATEDEIDQCVK-EKKLKRKILGQSSPEKKIRIENG 874
              E   ++   E    ++++++ +   + ++++ +K +K  K K + +    K+ R +  
Sbjct: 673  WKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIK 732

Query: 875  MEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAES---NQCIQQLTSERFD 931
             E   +  +E+  D    E  +N+  ++  E  + GM S I ES   +   +++  E+ +
Sbjct: 733  KESEKSFREEKIKDL--KEERENIPTDKDSEFTSLGM-SAIEESIGLHLVEKEIDIEKQE 789

Query: 932  SPAEETVNIPLK----EDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIEDVAVESSESNS 987
               +E+   P K    +++D   +         ++  +   EKDK  + +   +  E + 
Sbjct: 790  KHIKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDK 849

Query: 988  LVS--IPPALPPVVQHNFSVASPLTLSQDESRSV---KSESDITIEVDSIAEESQEGLCE 1042
            L S           +   + A   T  +++SR     K + +   +   +AE  ++ L E
Sbjct: 850  LYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLME 909

Query: 1043 ---RESANGFETNVASGTCSIIVQERESREKGQKRPSDG--NSGLMAKKQKRTPKRTSAA 1097
               ++S N   +    G      +E + +EK + + S    NS  + +++K +    + A
Sbjct: 910  KKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKA 969

Query: 1098 AKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIK-DGEKDKH 1156
               +     + +  E L   D   K    K ++  K +   +   +I+  +K   E DK 
Sbjct: 970  QHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKP 1029

Query: 1157 REKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKR 1216
            + K   +S  T     +L   D++  T     L  K  EI +++   K ++   ++ R R
Sbjct: 1030 KPKSSPASKDTRPKEKRLVN-DDLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLR 1088

Query: 1217 ------LKKKDRE 1223
                  LK KD+E
Sbjct: 1089 NRNCLELKIKDKE 1101



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 157/820 (19%), Positives = 285/820 (34%), Gaps = 151/820 (18%)

Query: 418  KEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDV 477
            K E+ D+ + M+E   + +++P T   S  EE                         RD 
Sbjct: 42   KIERSDVSKEMKEKSSMKRKLPFTISPSRNEE-------------------------RDS 76

Query: 478  NSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLL----------GRKNTPKQ 527
            ++ K+  E++KT+ +  +  +    +   Y  +E+K+  LL+             N P Q
Sbjct: 77   DTEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQ 136

Query: 528  KEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVK----- 582
                 KK   S     ++  K  ER ET     +   + ++  E    G  V VK     
Sbjct: 137  TTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGW 196

Query: 583  -----------YGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWP 631
                       Y   K      A + +  +DD   L+     G           D +   
Sbjct: 197  TPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSG---------HRDIVKLL 247

Query: 632  LDKGGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEG 691
            L  GG   +  K  +   D  +     EE +   +   PL     S      +++ N   
Sbjct: 248  LRHGGNPFQANKHGERPVDVAE----TEELELLLKREVPLSDDDESYTDSEEAQSVNPSS 303

Query: 692  KSDSCSSDSETEDAL--EKNLINEELSLKDELEKNENLNDDKLDEENPKI--SAHILKEN 747
              ++  S++E +  +   K ++  +  L   L++ E  +DD  DEE  K+    HIL++ 
Sbjct: 304  VDENIDSETEKDSLICESKQILPSKTPLPSALDEYEFKDDD--DEEINKMIDDRHILRKE 361

Query: 748  DRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEII 807
             R + +P                    + EKT    K+ EK+   K  +SK +  S  + 
Sbjct: 362  QRKENEP--------------------EAEKTHLFAKQ-EKAFYPKSFKSKKQKPSRVLY 400

Query: 808  KISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEK-KLKRKILGQSSPE 866
              +     EA     I      +    N +  +  E  +    K+K K+KRK+  Q+  +
Sbjct: 401  SSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLKNQNKNK 460

Query: 867  KKIRI---ENGMEMT--NTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQC 921
            +   +   + G E T    ++     DC   +  +  NF + F  +++    L       
Sbjct: 461  ENQELKQEKEGKENTRITNLTVNTGLDC-SEKTREEGNFRKSFSPKDDTSLHLFH----- 514

Query: 922  IQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLD-DLDEKDKTSIEDVAV 980
            I    S +      E  + PLK+ E     + P +    E+ L  DL   D T  E +  
Sbjct: 515  ISTGKSPKHSCGLSEKQSTPLKQ-EHTKTCLSPGS---SEMSLQPDLVRYDNTESEFLPE 570

Query: 981  ESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGL 1040
             SS  +                F   S   +  ++       SD T++     +  +EG 
Sbjct: 571  SSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLK-----KMDKEGK 625

Query: 1041 CERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGLMAKKQKRTPKRTSAAAKN 1100
              ++                 ++ +E  ++  K+  +G       K      + S     
Sbjct: 626  TLKKHK---------------LKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEFDR 670

Query: 1101 E--KNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHRE 1158
            E  K    +S ++EDL              LN+          +++  +IKD +  K  E
Sbjct: 671  EFWKENFFKSDETEDL-------------FLNMEHESLTLEKKSKLEKNIKDDKSTK--E 715

Query: 1159 KHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRK 1198
            KH  S  R +K      E D +      SF +EK++++++
Sbjct: 716  KHV-SKERNFK-----EERDKIKKESEKSFREEKIKDLKE 749


>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
          Length = 2062

 Score = 84.3 bits (207), Expect = 6e-16
 Identities = 136/685 (19%), Positives = 257/685 (37%), Gaps = 141/685 (20%)

Query: 409  TVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPR 468
            T   H  K +  K++ ++  +E+ K  +E  + ++K E  ENI ++ +SE   + + +  
Sbjct: 736  TKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEE-RENIPTDKDSEFTSLGMSAIE 794

Query: 469  GRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQK 528
                 +  ++ ++KEI+ EK E  +K++                               K
Sbjct: 795  E----SIGLHLVEKEIDIEKQEKHIKES-------------------------------K 819

Query: 529  EKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKT 588
            EK  K+ +  +KD ++ E K+ E+E+ + K + + E+D+ D+  C+   K K K     T
Sbjct: 820  EKPEKRSQIKEKDIEKMERKTFEKEK-KIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHT 878

Query: 589  QKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNK 648
            +K ++   KS                                 + K   ++K ++K   K
Sbjct: 879  EKCHKEGEKSKNTA----------------------------AIKKTDDREKSREKMDRK 910

Query: 649  EDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEK 708
             D EK EK     +  ++     K+  S N  Y  S+   ++ K        ++ D    
Sbjct: 911  HDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESI 970

Query: 709  NLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRTQMQPLET----------- 757
            N+ N +  +++E +K+  ++ +K   E P      L   ++T+ +PL+T           
Sbjct: 971  NITNSK-HIQEE-KKSSIVDGNKAQHEKP------LSLKEKTKDEPLKTPDGKEKDKKDK 1022

Query: 758  ---LKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQ 814
                  E  +++  +QI      K+E  K + + SP  K  R K K L  + +  +SF  
Sbjct: 1023 DIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSF-- 1080

Query: 815  NEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQ-----CVKEK---KLKRKILGQSSPE 866
                 E  +    LE+     K+     + E ++     C++ K   K K K     S  
Sbjct: 1081 -----ERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKN 1135

Query: 867  KKIRIENGMEMTNTVSQERTSD----------------CIGSEGMKNLNFEQHFERENEG 910
            K++      E+T+  ++E+                    +G     + N      R    
Sbjct: 1136 KELTRSKSSEVTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENE 1195

Query: 911  MPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDLDEK 970
             P L + S   I   +SE        T   P++ D D M       L   E  +      
Sbjct: 1196 KPGLSSRSVSMISVASSEDSCHTTVTTPRPPVEYDSDFM-------LESSESQMSFSQSP 1248

Query: 971  DKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEV- 1029
              +  +  A+   E +SL  +P  + P   +  S +   + S ++ + + SE   TIEV 
Sbjct: 1249 FLSIAKSPALHERELDSLADLPERIKPPYANRLSTSHLRSSSVEDVKLIISEGRPTIEVR 1308

Query: 1030 ---------------DSIAEESQEG 1039
                            +I+EES +G
Sbjct: 1309 RCSMPSVICEHTKQFQTISEESNQG 1333



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 180/913 (19%), Positives = 349/913 (38%), Gaps = 181/913 (19%)

Query: 419  EEKKDLEESMEEALKLDQEMPLT----------EVKSEPEENIDSNSESEREEIELKSPR 468
            E   D+ E+ E  L L +E+PL+          E +S    ++D N +SE E+  L    
Sbjct: 285  ERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICE- 343

Query: 469  GRRRIARDVNSIKKEIEEEKTEDKLKDNDTE--NKDVDDDY--ETAEKKENELLLGRKNT 524
                 ++ +   K  +     E + KD+D E  NK +DD +     ++KENE    + + 
Sbjct: 344  -----SKQILPSKTPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHL 398

Query: 525  PKQKEK-------KIKKQEDSD---KDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCL 574
              ++EK       K KKQ+ S      ++  +E++ + ++  + C    E    DM+   
Sbjct: 399  FAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQ--- 455

Query: 575  TGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDK 634
                         T+K Y  S        GE                             
Sbjct: 456  -------------TKKEYVVS--------GE----------------------------- 465

Query: 635  GGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKST-LSSNMPYGLSKTANSEG-- 691
                 KQK K K K  ++   K ++E ++ K G+   + T L+ N     S+    EG  
Sbjct: 466  ----HKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNF 521

Query: 692  ------KSD----------------SCSSDSETEDALEKNLI-------NEELSLKDELE 722
                  K D                SC    +    L++          + E+SL+ +L 
Sbjct: 522  RKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLV 581

Query: 723  KNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGE-------NEQIVQIFGN- 774
            + +N   + L E +   S    K  ++++ Q  +   LE GE       +E     F N 
Sbjct: 582  RYDNTESEFLPESS---SVKSCKHKEKSKHQ--KDFHLEFGEKSNAKIKDEDHSPTFENS 636

Query: 775  -----------------KMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEA 817
                             K++  E  K++ +K  +G+  + KTKD + E+ +   F   E 
Sbjct: 637  DCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEF-DREF 695

Query: 818  GSEPHIEAHSLE--LSSLDNKNFSSATEDEIDQCVK-EKKLKRKILGQSSPEKKIRIENG 874
              E   ++   E    ++++++ +   + ++++ +K +K  K K + +    K+ R +  
Sbjct: 696  WKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIK 755

Query: 875  MEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAES---NQCIQQLTSERFD 931
             E   +  +E+  D    E  +N+  ++  E  + GM S I ES   +   +++  E+ +
Sbjct: 756  KESEKSFREEKIKDL--KEERENIPTDKDSEFTSLGM-SAIEESIGLHLVEKEIDIEKQE 812

Query: 932  SPAEETVNIPLK----EDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIEDVAVESSESNS 987
               +E+   P K    +++D   +         ++  +   EKDK  + +   +  E + 
Sbjct: 813  KHIKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDK 872

Query: 988  LVS--IPPALPPVVQHNFSVASPLTLSQDESRSV---KSESDITIEVDSIAEESQEGLCE 1042
            L S           +   + A   T  +++SR     K + +   +   +AE  ++ L E
Sbjct: 873  LYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLME 932

Query: 1043 ---RESANGFETNVASGTCSIIVQERESREKGQKRPSDG--NSGLMAKKQKRTPKRTSAA 1097
               ++S N   +    G      +E + +EK + + S    NS  + +++K +    + A
Sbjct: 933  KKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKA 992

Query: 1098 AKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIK-DGEKDKH 1156
               +     + +  E L   D   K    K ++  K +   +   +I+  +K   E DK 
Sbjct: 993  QHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKP 1052

Query: 1157 REKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKR 1216
            + K   +S  T     +L   D++  T     L  K  EI +++   K ++   ++ R R
Sbjct: 1053 KPKSSPASKDTRPKEKRLVN-DDLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLR 1111

Query: 1217 ------LKKKDRE 1223
                  LK KD+E
Sbjct: 1112 NRNCLELKIKDKE 1124



 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 159/821 (19%), Positives = 292/821 (35%), Gaps = 130/821 (15%)

Query: 418  KEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIAR-D 476
            K E+ D+ + M+E   + +++P T     P  N + +S+++ +        G R I+   
Sbjct: 42   KIERSDVSKEMKEKSSMKRKLPFT---ISPSRNEERDSDTDSDPGHTSENWGERLISSYR 98

Query: 477  VNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLL----------GRKNTPK 526
              S K+  E++KT+ +  +  +    +   Y  +E+K+  LL+             N P 
Sbjct: 99   TYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPS 158

Query: 527  QKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVK---- 582
            Q     KK   S     ++  K  ER ET     +   + ++  E    G  V VK    
Sbjct: 159  QTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAG 218

Query: 583  ------------YGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIW 630
                        Y   K      A + +  +DD   L+     G           D +  
Sbjct: 219  WTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSG---------HRDIVKL 269

Query: 631  PLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSE 690
             L  GG   +  K  +   D  +     EE +   +   PL     S      +++ N  
Sbjct: 270  LLRHGGNPFQANKHGERPVDVAE----TEELELLLKREVPLSDDDESYTDSEEAQSVNPS 325

Query: 691  GKSDSCSSDSETEDAL--EKNLINEELSLKDELEKNENLNDDKLDEENPKI--SAHILKE 746
               ++  S++E +  +   K ++  +  L   L++ E  +DD  DEE  K+    HIL++
Sbjct: 326  SVDENIDSETEKDSLICESKQILPSKTPLPSALDEYEFKDDD--DEEINKMIDDRHILRK 383

Query: 747  NDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEI 806
              R + +P                    + EKT    K+ EK+   K  +SK +  S  +
Sbjct: 384  EQRKENEP--------------------EAEKTHLFAKQ-EKAFYPKSFKSKKQKPSRVL 422

Query: 807  IKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEK-KLKRKILGQSSP 865
               +     EA     I      +    N +  +  E  +    K+K K+KRK+  Q+  
Sbjct: 423  YSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLKNQNKN 482

Query: 866  EKKIRI---ENGMEMT--NTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQ 920
            ++   +   + G E T    ++     DC   +  +  NF + F  +++    L      
Sbjct: 483  KENQELKQEKEGKENTRITNLTVNTGLDC-SEKTREEGNFRKSFSPKDDTSLHLFH---- 537

Query: 921  CIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLD-DLDEKDKTSIEDVA 979
             I    S +      E  + PLK+ E     + P +    E+ L  DL   D T  E + 
Sbjct: 538  -ISTGKSPKHSCGLSEKQSTPLKQ-EHTKTCLSPGS---SEMSLQPDLVRYDNTESEFLP 592

Query: 980  VESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEG 1039
              SS  +                F   S   +  ++       SD T++     +  +EG
Sbjct: 593  ESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLK-----KMDKEG 647

Query: 1040 LCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGLMAKKQKRTPKRTSAAAK 1099
               ++                 ++ +E  ++  K+  +G       K      + S    
Sbjct: 648  KTLKKHK---------------LKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEFD 692

Query: 1100 NE--KNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHR 1157
             E  K    +S ++EDL              LN+          +++  +IKD +  K  
Sbjct: 693  REFWKENFFKSDETEDL-------------FLNMEHESLTLEKKSKLEKNIKDDKSTK-- 737

Query: 1158 EKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRK 1198
            EKH  S  R +K      E D +      SF +EK++++++
Sbjct: 738  EKHV-SKERNFK-----EERDKIKKESEKSFREEKIKDLKE 772


>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
           sapiens]
          Length = 412

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 34/171 (19%)

Query: 260 VPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEEEVPEE-------------- 305
           +PD+  +   E    +   +E+  AEE DEEK +EA   EE   E               
Sbjct: 32  LPDHRTLQAPEGALGNVGAEEEEDAEE-DEEKREEAGAEEEAAEESRPGAQGPSSPSSQP 90

Query: 306 ------------------ELDPE-ERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKL 346
                             ELD + +R  FL  L+ FM+ RGTP+N+ P++  + L+L+ L
Sbjct: 91  PGLHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYAL 150

Query: 347 FRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFE 397
           FRLV  +GG   + +  VW+++   L +P   ++A++ ++T Y KYLY +E
Sbjct: 151 FRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYE 201


>gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo
           sapiens]
          Length = 1188

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 66/285 (23%)

Query: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352
           K + EE P+  +  E R +   FL  LYK+M++R TPI + P LG+K +NL+ +F+    
Sbjct: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361

Query: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412
            GG + I +   WK IY +LG    +++A+   +  Y + +  +E +             
Sbjct: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408

Query: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472
                              +K +++ PL  +K   +EN    +E++ +        G +R
Sbjct: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443

Query: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527
           I  ++   KKE          K+N  + +D   +  + ++KE E L+ +K+ P+      
Sbjct: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492

Query: 528 KEKKIKKQED---------SDKDSDEEEEKSQEREETESKCDSEG 563
            +KKI+  ++          D + D E ++    E+   +   +G
Sbjct: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKG 537


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 5/115 (4%)

Query: 283 PAEENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLN 342
           P +  D   E++ K    ++ E + DP+ ++ FL  L+ FM+ RGTP+N+ P++  + L+
Sbjct: 217 PPDHGDWTYEEQFK----QLYELDGDPKRKE-FLDDLFSFMQKRGTPVNRIPIMAKQVLD 271

Query: 343 LFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFE 397
           LF L+ LV  +GG   + +  +W++I   L +P   ++A++ ++T Y KYLY +E
Sbjct: 272 LFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYE 326



 Score = 32.0 bits (71), Expect = 3.8
 Identities = 18/67 (26%), Positives = 31/67 (46%)

Query: 505 DDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGE 564
           +D     ++E+    G   +P +  +   ++   D  SDE+ +   E EE E     + E
Sbjct: 82  EDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEE 141

Query: 565 EDEEDME 571
           E+EED E
Sbjct: 142 EEEEDYE 148



 Score = 30.8 bits (68), Expect = 8.5
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 11/48 (22%)

Query: 525 PKQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEP 572
           PK +E+++  +ED  +D +EEEE  ++ EE         EEDEE + P
Sbjct: 125 PKWEEEEM--EEDLGEDEEEEEEDYEDEEE---------EEDEEGLGP 161


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 155/748 (20%), Positives = 279/748 (37%), Gaps = 112/748 (14%)

Query: 419  EEKKDLEESMEEALKLDQEMP----LTEVKSEPEENIDSNSESEREEIELKSPRGRRRIA 474
            E +K+ EES+E  + L+   P     TE  S+ + ++ S S  E +  +LK+      + 
Sbjct: 1309 EPEKNTEESVEGIVVLENNPPGLLNQTECVSDNQVHL-SESTMEHDNTKLKAATVENAVL 1367

Query: 475  RDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKK 534
             + N+++++  E   E K    +T    +  D    E  + ++   +K   +   ++ + 
Sbjct: 1368 LETNTVEEKNVEINLESK---ENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEV 1424

Query: 535  QEDSDKDSDEEE--EKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIY 592
             E + +  D+E   +K + R+E E          ++D+ P              K + I 
Sbjct: 1425 VESTTESQDKENSHQKKERRKEEEKPLQKSPLHIKDDVLP--------------KQKLIA 1470

Query: 593  EASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKA-----KN 647
            E +++   I+ G  L+                 ++ +         ++ KKKA     K+
Sbjct: 1471 EQTLQENLIEKGSNLH-----------------EKTLGETSANAETEQNKKKADPENIKS 1513

Query: 648  KEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDS--ETEDA 705
            + D  +D   D+  +K  RGR   ++  +S     LS   NSE  S     +   +    
Sbjct: 1514 EGDGTQDIV-DKSSEKLVRGRTRYQTRRASQGL--LSSIENSESDSSEAKEEGSRKKRSG 1570

Query: 706  LEKNLINEELSLKDELEK----------NENLNDDKLDEENPKISAHILKENDRTQMQPL 755
              KN  NE + ++D+ EK          N++ +     EE+  I + I ++ D +     
Sbjct: 1571 KWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKATSEEDVSIKSPICEKQDESNTVIC 1630

Query: 756  ETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKS------PKGKGRRSKTKDLSLEIIKI 809
            +   +   +  Q+     N  E+  E  K AE S      P+   R   T++    + K 
Sbjct: 1631 QDSTV-TSDLLQVPDDLPNVCEEKNETSKYAEYSFTSLPVPESNLR---TRNAIKRLHKR 1686

Query: 810  SSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKI 869
             SF     G    I     ++SSL  K F +       +C            Q    +++
Sbjct: 1687 DSFDNCSLGESSKIGIS--DISSLSEKTFQTL------EC------------QHKRSRRV 1726

Query: 870  RIENGMEMTNTVSQERTSDCIGSEGMKNLNFE-QHFERENEGMPSLIAESNQCIQQLTSE 928
            R   G +     SQ +    IG +  +N + E    ++ +   P   +E++Q       +
Sbjct: 1727 RRSKGCDCCGEKSQPQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQ 1786

Query: 929  RFDSPAEETVNIPLKEDEDAM--PLIGPETLVCHEVDLDDLDEKDKTSIEDVA-VESSES 985
              D       ++ LKED D +   LI  ET        + L        E++  ++SSE+
Sbjct: 1787 FLDEHHSVNFHLGLKEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEA 1846

Query: 986  NSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGLCERES 1045
             SL S           NF    P      +S++V  ES  T E         E   E  +
Sbjct: 1847 MSLES-----QESPNENFKTVGPCL---GDSKNVSQESLETKEEKPEETPKMELSLENVT 1898

Query: 1046 ANG-----FETNVASGTCSIIVQERESREKGQKRPSDGNSGLMA-KKQKRTPKRTSAAAK 1099
              G      E+N+       +    E+   GQ+R   G S   A ++ KR     +  AK
Sbjct: 1899 VEGNACKVTESNLEKAKTMELNVGNEASFHGQERTKTGISEEAAIEENKRNDDSEADTAK 1958

Query: 1100 NEKNGTGQSSDSEDLPVLDNSSKCTPVK 1127
                       + D+ + DN+   TPVK
Sbjct: 1959 LNAKEVATEEFNSDISLSDNT---TPVK 1983



 Score = 42.4 bits (98), Expect = 0.003
 Identities = 166/814 (20%), Positives = 308/814 (37%), Gaps = 116/814 (14%)

Query: 481  KKEIEEEK---TEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQED 537
            +K  E+ K   TE+++  +    +DV +D   AE  E   L   +     K       E 
Sbjct: 1110 RKPKEDSKMMITEEQMDSDIVIPQDVTEDCGMAEHLEKSSLSNNECGSLDKTSP----EM 1165

Query: 538  SDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVK--VKYGRGKTQKIYEAS 595
            S+ ++DE ++      +T ++C S  E         ++ T V     Y   + Q      
Sbjct: 1166 SNSNNDERKKALISSRKTSTECASSTENSFVVSSSSVSNTTVAGTPPYPTSRRQTF---- 1221

Query: 596  IKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEK-- 653
            I   + D  E          N+     VK ++         PK KQ++   +K DSEK  
Sbjct: 1222 ITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTDFLPKAKQREGTFSKSDSEKIV 1281

Query: 654  -DEKRDE------ERQKSKRGRPPLKS--------------TLSSNMPYGLSKTA----N 688
               KR        E+  +KR +P ++S               L +N P  L++T     N
Sbjct: 1282 NGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEGIVVLENNPPGLLNQTECVSDN 1341

Query: 689  SEGKSDSCSSDSET-------EDA--LEKNLINEELSLKDELEKNEN-----LNDDKLDE 734
                S+S      T       E+A  LE N + EE +++  LE  EN     ++ D++  
Sbjct: 1342 QVHLSESTMEHDNTKLKAATVENAVLLETNTV-EEKNVEINLESKENTPPVVISADQMVN 1400

Query: 735  ENPKI----SAHILKENDRTQMQPLE-TLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKS 789
            E+ ++    +   L+ + R + + +E T + +  EN         K E+ +E +K  +KS
Sbjct: 1401 EDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENSH------QKKERRKEEEKPLQKS 1454

Query: 790  ---------PKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
                     PK K    +T   +L I K S+  +   G               D +N  S
Sbjct: 1455 PLHIKDDVLPKQKLIAEQTLQENL-IEKGSNLHEKTLGETSANAETEQNKKKADPENIKS 1513

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
              E +  Q + +K  ++ + G++  + + R   G+ +++  + E  S     EG +    
Sbjct: 1514 --EGDGTQDIVDKSSEKLVRGRTRYQTR-RASQGL-LSSIENSESDSSEAKEEGSRKKRS 1569

Query: 901  EQHFERENEGMPSLIAE----SNQCIQ-QLTSERFDSPAEETVNI--PLKEDEDAMPLIG 953
             +   + NE +     E      +CI+ +  S  + + +EE V+I  P+ E +D      
Sbjct: 1570 GKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKATSEEDVSIKSPICEKQDE----- 1624

Query: 954  PETLVCHE--VDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPL-- 1009
              T++C +  V  D L   D   + +V  E +E++          PV + N    + +  
Sbjct: 1625 SNTVICQDSTVTSDLLQVPD--DLPNVCEEKNETSKYAEYSFTSLPVPESNLRTRNAIKR 1682

Query: 1010 --TLSQDESRSVKSESDITI-EVDSIAEESQEGL-CERESANGFETNVASGTCSIIVQER 1065
                   ++ S+   S I I ++ S++E++ + L C+ + +     +     C    Q +
Sbjct: 1683 LHKRDSFDNCSLGESSKIGISDISSLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQPQ 1742

Query: 1066 ESREKGQKRPSDGNSGLMAKKQK--RTPKRTSAAAKNEKNGTGQSSD-----------SE 1112
            E    G K   + +  +   K+   + P   S  ++      GQ  D            E
Sbjct: 1743 EKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQFLDEHHSVNFHLGLKE 1802

Query: 1113 DLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHREKHPNSSPRTYKWSF 1172
            D   +++S   +  K    +  + L          I D +  +        SP     + 
Sbjct: 1803 DNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFKTV 1862

Query: 1173 QLNELDNMN-STERISFLQEKLQEIRKYYMSLKS 1205
                 D+ N S E +   +EK +E  K  +SL++
Sbjct: 1863 GPCLGDSKNVSQESLETKEEKPEETPKMELSLEN 1896


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 110/452 (24%), Positives = 188/452 (41%), Gaps = 63/452 (13%)

Query: 415 PKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIA 474
           PK+K + K +EE +EE  K++ E      KSE EE + + +E                +A
Sbjct: 444 PKLKVQHKFVEEIIEET-KVEDE------KSEMEEALTAITE---------------ELA 481

Query: 475 RDVNSIKKEIEEEKTED-KLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIK 533
             +   KKE  EEK E+ + ++ +   K         E KE E   G K   + +E+  +
Sbjct: 482 VSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEE---GEKEEEEGQEE--E 536

Query: 534 KQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYE 593
           ++ED    SD+ EE   E+E +  K   EGE++E + E    G + + K  +   +K  E
Sbjct: 537 EEEDEGAKSDQAEEGGSEKEGSSEK--EEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEE 594

Query: 594 ASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEK 653
            + K   + D +           V   E  K+     P+++ G     K   + K  S  
Sbjct: 595 VATKEELVADAK-----------VEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 643

Query: 654 DEKRDEERQKS--------KRGRPPL-KSTLSSNMPYGLSKTANSEGKSDSCSSDSETED 704
            +   EE+ KS        ++G+ P+ KS +       + K+   E KS +     E ++
Sbjct: 644 PKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKE 703

Query: 705 ALEKNLINEELSLKDELEKNENLNDD---KLDEENPKISAHILKENDRTQMQPLETLKLE 761
             EK +  +E   ++++EK E    D   K   E+P     + +    T+   +  L+ E
Sbjct: 704 EEEKEV--KEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVH-LEKE 760

Query: 762 VGENEQIVQIFGNKMEKTEEVKKEAEKSPKG-KGRRSKTKDLSLEIIKISSFGQ--NEAG 818
             E  + +Q    K +   E   E E S KG KG R +   ++ E+       Q   E G
Sbjct: 761 TKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKG 820

Query: 819 S----EPHIEAHSLELSSLDNKNFSSATEDEI 846
           S    E  +  + L+LS  D K     +E+++
Sbjct: 821 SGREEEKGVVTNGLDLSPADEKKGGDKSEEKV 852



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 79/409 (19%), Positives = 162/409 (39%), Gaps = 69/409 (16%)

Query: 414 EPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRI 473
           E K   E+K+ E   EE     ++ P+     E +E      E E +E E +   G +  
Sbjct: 487 EKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSD 546

Query: 474 ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQ--KEKK 531
             +    +KE   EK E + ++ +TE +   ++ E  E+K+ E       T ++   + K
Sbjct: 547 QAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAK 606

Query: 532 IKKQEDS----DKDSDEEEEKS-------QEREETESKCDSEGEEDEEDMEPCLTGTKVK 580
           ++K E +     K   EE+ KS       +E+ ++        E+ +  +       K K
Sbjct: 607 VEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 666

Query: 581 VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKK 640
               +   ++  ++ +  + +++ +                  KA+     + KG  K++
Sbjct: 667 SPVSKSPVEEKAKSPVPKSPVEEAK-----------------SKAE-----VGKGEQKEE 704

Query: 641 QKKKAKNKEDSEKDEKRDEERQ---KSKRGRPPLKS-------TLSSNMPYGLSKTANSE 690
           ++K+ K     EK EK++E+ +   + K+   P+K        T++ ++   L K    E
Sbjct: 705 EEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEE 764

Query: 691 GK-----------SDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKI 739
           GK                S+ E  D   K    E++++  E+E  E +  +  +      
Sbjct: 765 GKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE------ 818

Query: 740 SAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEK 788
                K + R + + + T  L++   ++  +  G+K E+   V K  EK
Sbjct: 819 -----KGSGREEEKGVVTNGLDLSPADE--KKGGDKSEEKVVVTKTVEK 860



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 89/430 (20%), Positives = 173/430 (40%), Gaps = 48/430 (11%)

Query: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKI 532
           I+  +   K E  + K + K  +   E   V+D  E +E +E    +  +     KE+K 
Sbjct: 432 ISSKIQKPKVEAPKLKVQHKFVEEIIEETKVED--EKSEMEEALTAITEELAVSMKEEKK 489

Query: 533 KKQEDSDKDSDEEEEK------------SQEREETESKCDSEGEEDEEDMEPCLTGTKVK 580
           +  E+ +++ + EEE+             + +EE   K + EG+E+EE+ +      + +
Sbjct: 490 EAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAE 549

Query: 581 ----VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGG 636
                K G  + ++  +   ++    +GE            + +E    + ++       
Sbjct: 550 EGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEK 609

Query: 637 PKKKQ----KKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGK 692
           P+K +    K   + K  S   +   EE+ KS   + P++    S +P         +GK
Sbjct: 610 PEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVP---KSPVEEKGK 666

Query: 693 SDSCSS--DSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRT 750
           S    S  + + +  + K+ + EE   K E+ K E   +++ + +       + K+ ++ 
Sbjct: 667 SPVSKSPVEEKAKSPVPKSPV-EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKP 725

Query: 751 QMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKIS 810
           +  P E  K E    E+ V      +  T+ VK   EK  K +G     K L  E  K  
Sbjct: 726 KDVP-EKKKAESPVKEEAV---AEVVTITKSVKVHLEKETKEEG-----KPLQQEKEKEK 776

Query: 811 SFGQNEAGSEPHIEAHSLELSSLDNKNFSSATE--DEIDQCVKEKKLKRKILGQSSPEKK 868
           + G  E GSE        + S  ++   +   E  +E++Q  KEK       G    E+K
Sbjct: 777 AGG--EGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEK-------GSGREEEK 827

Query: 869 IRIENGMEMT 878
             + NG++++
Sbjct: 828 GVVTNGLDLS 837



 Score = 31.6 bits (70), Expect = 5.0
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 12/165 (7%)

Query: 151 TEDEKEEESSEEEDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKDQ 210
           TE E E E +E ++E K     E +     +V+  +  +  P    SP     +  K   
Sbjct: 571 TEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEK--PEKAKSPVPKSPVEEKGKS 628

Query: 211 CLVRSFIDSKFYS-IARKDIKEVDILNLPESELSTKPGLQKASIFLKTRVVPDNWKMDIS 269
            + +S ++ K  S + +  ++E     +P+S     P  +K    +    V +  K  + 
Sbjct: 629 PVPKSPVEEKGKSPVPKSPVEEKGKSPVPKS-----PVEEKGKSPVSKSPVEEKAKSPVP 683

Query: 270 EI-LESSSSDDEDGPAEENDEEKEKEAKKT--EEEVPEEELDPEE 311
           +  +E + S  E G  E+ +EE EKE K+   EE+V ++E  P++
Sbjct: 684 KSPVEEAKSKAEVGKGEQKEEE-EKEVKEAPKEEKVEKKEEKPKD 727


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 110/452 (24%), Positives = 188/452 (41%), Gaps = 63/452 (13%)

Query: 415 PKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIA 474
           PK+K + K +EE +EE  K++ E      KSE EE + + +E                +A
Sbjct: 68  PKLKVQHKFVEEIIEET-KVEDE------KSEMEEALTAITE---------------ELA 105

Query: 475 RDVNSIKKEIEEEKTED-KLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIK 533
             +   KKE  EEK E+ + ++ +   K         E KE E   G K   + +E+  +
Sbjct: 106 VSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEE---GEKEEEEGQEE--E 160

Query: 534 KQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYE 593
           ++ED    SD+ EE   E+E +  K   EGE++E + E    G + + K  +   +K  E
Sbjct: 161 EEEDEGAKSDQAEEGGSEKEGSSEK--EEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEE 218

Query: 594 ASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEK 653
            + K   + D +           V   E  K+     P+++ G     K   + K  S  
Sbjct: 219 VATKEELVADAK-----------VEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 267

Query: 654 DEKRDEERQKS--------KRGRPPL-KSTLSSNMPYGLSKTANSEGKSDSCSSDSETED 704
            +   EE+ KS        ++G+ P+ KS +       + K+   E KS +     E ++
Sbjct: 268 PKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKE 327

Query: 705 ALEKNLINEELSLKDELEKNENLNDD---KLDEENPKISAHILKENDRTQMQPLETLKLE 761
             EK +  +E   ++++EK E    D   K   E+P     + +    T+   +  L+ E
Sbjct: 328 EEEKEV--KEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVH-LEKE 384

Query: 762 VGENEQIVQIFGNKMEKTEEVKKEAEKSPKG-KGRRSKTKDLSLEIIKISSFGQ--NEAG 818
             E  + +Q    K +   E   E E S KG KG R +   ++ E+       Q   E G
Sbjct: 385 TKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKG 444

Query: 819 S----EPHIEAHSLELSSLDNKNFSSATEDEI 846
           S    E  +  + L+LS  D K     +E+++
Sbjct: 445 SGREEEKGVVTNGLDLSPADEKKGGDKSEEKV 476



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 79/409 (19%), Positives = 162/409 (39%), Gaps = 69/409 (16%)

Query: 414 EPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRI 473
           E K   E+K+ E   EE     ++ P+     E +E      E E +E E +   G +  
Sbjct: 111 EKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSD 170

Query: 474 ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQ--KEKK 531
             +    +KE   EK E + ++ +TE +   ++ E  E+K+ E       T ++   + K
Sbjct: 171 QAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAK 230

Query: 532 IKKQEDS----DKDSDEEEEKS-------QEREETESKCDSEGEEDEEDMEPCLTGTKVK 580
           ++K E +     K   EE+ KS       +E+ ++        E+ +  +       K K
Sbjct: 231 VEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 290

Query: 581 VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKK 640
               +   ++  ++ +  + +++ +                  KA+     + KG  K++
Sbjct: 291 SPVSKSPVEEKAKSPVPKSPVEEAK-----------------SKAE-----VGKGEQKEE 328

Query: 641 QKKKAKNKEDSEKDEKRDEERQ---KSKRGRPPLKS-------TLSSNMPYGLSKTANSE 690
           ++K+ K     EK EK++E+ +   + K+   P+K        T++ ++   L K    E
Sbjct: 329 EEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEE 388

Query: 691 GK-----------SDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKI 739
           GK                S+ E  D   K    E++++  E+E  E +  +  +      
Sbjct: 389 GKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE------ 442

Query: 740 SAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEK 788
                K + R + + + T  L++   ++  +  G+K E+   V K  EK
Sbjct: 443 -----KGSGREEEKGVVTNGLDLSPADE--KKGGDKSEEKVVVTKTVEK 484



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 89/430 (20%), Positives = 173/430 (40%), Gaps = 48/430 (11%)

Query: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKI 532
           I+  +   K E  + K + K  +   E   V+D  E +E +E    +  +     KE+K 
Sbjct: 56  ISSKIQKPKVEAPKLKVQHKFVEEIIEETKVED--EKSEMEEALTAITEELAVSMKEEKK 113

Query: 533 KKQEDSDKDSDEEEEK------------SQEREETESKCDSEGEEDEEDMEPCLTGTKVK 580
           +  E+ +++ + EEE+             + +EE   K + EG+E+EE+ +      + +
Sbjct: 114 EAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAE 173

Query: 581 ----VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGG 636
                K G  + ++  +   ++    +GE            + +E    + ++       
Sbjct: 174 EGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEK 233

Query: 637 PKKKQ----KKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGK 692
           P+K +    K   + K  S   +   EE+ KS   + P++    S +P         +GK
Sbjct: 234 PEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVP---KSPVEEKGK 290

Query: 693 SDSCSS--DSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRT 750
           S    S  + + +  + K+ + EE   K E+ K E   +++ + +       + K+ ++ 
Sbjct: 291 SPVSKSPVEEKAKSPVPKSPV-EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKP 349

Query: 751 QMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKIS 810
           +  P E  K E    E+ V      +  T+ VK   EK  K +G     K L  E  K  
Sbjct: 350 KDVP-EKKKAESPVKEEAV---AEVVTITKSVKVHLEKETKEEG-----KPLQQEKEKEK 400

Query: 811 SFGQNEAGSEPHIEAHSLELSSLDNKNFSSATE--DEIDQCVKEKKLKRKILGQSSPEKK 868
           + G  E GSE        + S  ++   +   E  +E++Q  KEK       G    E+K
Sbjct: 401 AGG--EGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEK-------GSGREEEK 451

Query: 869 IRIENGMEMT 878
             + NG++++
Sbjct: 452 GVVTNGLDLS 461



 Score = 31.6 bits (70), Expect = 5.0
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 12/165 (7%)

Query: 151 TEDEKEEESSEEEDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKDQ 210
           TE E E E +E ++E K     E +     +V+  +  +  P    SP     +  K   
Sbjct: 195 TEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEK--PEKAKSPVPKSPVEEKGKS 252

Query: 211 CLVRSFIDSKFYS-IARKDIKEVDILNLPESELSTKPGLQKASIFLKTRVVPDNWKMDIS 269
            + +S ++ K  S + +  ++E     +P+S     P  +K    +    V +  K  + 
Sbjct: 253 PVPKSPVEEKGKSPVPKSPVEEKGKSPVPKS-----PVEEKGKSPVSKSPVEEKAKSPVP 307

Query: 270 EI-LESSSSDDEDGPAEENDEEKEKEAKKT--EEEVPEEELDPEE 311
           +  +E + S  E G  E+ +EE EKE K+   EE+V ++E  P++
Sbjct: 308 KSPVEEAKSKAEVGKGEQKEEE-EKEVKEAPKEEKVEKKEEKPKD 351


>gi|47078224 AT rich interactive domain 5A [Homo sapiens]
          Length = 594

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)

Query: 273 ESSSSDDEDGPAEENDEEKEKEAKK--TEEEVPE------EELDPEERDNFLQQLYKFME 324
           +S+  D  D PA      K+   +   + E+ PE      EE + EE   FL  LYKFM+
Sbjct: 11  QSTEGDALDPPASPKPAGKQNGIQNPISLEDSPEAGGEREEEQEREEEQAFLVSLYKFMK 70

Query: 325 DRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYN 384
           +R TPI + P LG+K +NL+K+++ V   G  + +    +WK +Y +LG    +++A+  
Sbjct: 71  ERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATC 130

Query: 385 VKTAYRKYLYGFEEYCRSAN----------IQFRTVHHH--------EPKVKEEKKDLEE 426
            +  Y + +  +  + +  +           Q++    +         PK  +E++ +++
Sbjct: 131 TRRHYERLVLPYVRHLKGEDDKPLPTSKPRKQYKMAKENRGDDGATERPKKAKEERRMDQ 190

Query: 427 SMEEALKLDQEMPLTEVKSEPEEN 450
            M    K D   P      EP  N
Sbjct: 191 MMPGKTKADAADPAPLPSQEPPRN 214


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 88/380 (23%), Positives = 153/380 (40%), Gaps = 56/380 (14%)

Query: 416 KVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIAR 475
           K ++  K LEE   +  K  QE+     K   E   +   E ER E E +  R R R   
Sbjct: 283 KFRDTHKKLEEEKGKKEKERQEIE----KERRERERERERERERRERERERERERER--- 335

Query: 476 DVNSIKKEIEEEKTEDKLKDND-TENKDVDDDYETAEKKENELLLGR-KNTPKQKEKKIK 533
                +KE E E+  ++ +D D T+ +D D D E    ++ E    R K+  + +EK   
Sbjct: 336 -----EKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRD 390

Query: 534 KQEDSDKDSDEEEEKSQERE-ETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIY 592
           ++ + +++ + E E+ +ERE E E + + E E + E         K K +      +  Y
Sbjct: 391 RERERERERERERERERERERERERERERERERERE---------KDKKRDREEDEEDAY 441

Query: 593 EASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSE 652
           E      ++ + E  Y      W +R                    +++K +   KE   
Sbjct: 442 ERRKLERKLREKEAAYQERLKNWEIR--------------------ERKKTREYEKEAER 481

Query: 653 KDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLIN 712
           ++E+R E  +++KR    LK  L              + K    S+  +     EK +  
Sbjct: 482 EEERRREMAKEAKR----LKEFLED------YDDDRDDPKYYRGSALQKRLRDREKEMEA 531

Query: 713 EELSLKDELEKNENLNDDKLDEENPKISAHI--LKENDRTQMQPLETLKLEVGENEQIVQ 770
           +E   K E E+ E +    L E +P   A +  +++    + QP    + E  E E+  Q
Sbjct: 532 DERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQ 591

Query: 771 IFGNKMEKTEEVKKEAEKSP 790
               K E+  E ++E E+ P
Sbjct: 592 EKEEKREEPMEEEEEPEQKP 611



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 34/192 (17%)

Query: 418 KEEKKDLEESMEEALKLDQ-EMPLTEVKSEPEENIDSNSESERE---EIELKSPRG---R 470
           K++K+D EE  E+A +  + E  L E ++  +E + +    ER+   E E ++ R    R
Sbjct: 427 KDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERR 486

Query: 471 RRIARDVNSIKKEIEE-----------------EKTEDKLKDNDTENKDVDDDYETAEKK 513
           R +A++   +K+ +E+                 ++  D+ K+ + + +D   + E  E+ 
Sbjct: 487 REMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEI 546

Query: 514 ENELLLGRKNTP--------KQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEE 565
              LL      P        ++ E++ + Q   + +S+EEEE+ QE+EE     +   EE
Sbjct: 547 RQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKRE--EPMEEE 604

Query: 566 DEEDMEPCLTGT 577
           +E + +PCL  T
Sbjct: 605 EEPEQKPCLKPT 616


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 97/426 (22%), Positives = 186/426 (43%), Gaps = 62/426 (14%)

Query: 414 EPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRI 473
           E +++E++K+L E  +E  +  +     E   E EE +    E  RE+ E K  R   R+
Sbjct: 320 EKRLREQEKELREQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEE-KMWRQEERL 378

Query: 474 ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDY-ETAEKKENELLLGRKNTPKQKEKKI 532
                  +K++ E+  E K++D +    + D+   E  E+   +  +  +    ++EKK+
Sbjct: 379 WEQ----EKQMREQ--EQKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKM 432

Query: 533 KKQEDSDKDSDE---EEEKSQERE-----------ETESKCDSEGE-----EDEEDMEPC 573
           ++QE   +D +E   EEE+ +ERE           E E K   + E     E++E  +  
Sbjct: 433 QEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQR 492

Query: 574 LTGTKVKV---KYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGW---NVRYDE---WVK 624
           L   K K+   +  + + +KI+E   +  +I D E ++      W    +R  E   W +
Sbjct: 493 LPEQKEKLWEQEKMQEQEEKIWE---QEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQ 549

Query: 625 ADRI------IWPLDKGGPKK--KQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLS 676
            +++      +W  ++   KK  +Q+KK  ++E+  ++E+R  ER+K  R    +     
Sbjct: 550 EEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQE 609

Query: 677 SNMPYGLSKTANSEGK----SDSCSSDSETEDALEKNLINEELSL---------KDELEK 723
             M     K    E K     +      E     E+ +  +E  +         K++L +
Sbjct: 610 EKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLWE 669

Query: 724 NENLND-DKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEV 782
           +E + + +K+ E+  KI     K   +TQ Q  +T   E    E+ ++    KM + EE+
Sbjct: 670 HEKMQEQEKMQEQEEKIWEQ-EKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEM 728

Query: 783 KKEAEK 788
            +E E+
Sbjct: 729 MREQEE 734



 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 44/269 (16%)

Query: 406 QFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELK 465
           Q R     E   + EK   +E M+E  +   E    E K++ +E    + E  REE   +
Sbjct: 657 QQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREE---E 713

Query: 466 SPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEK--KENELLLGRKN 523
           S R R +  R+   + +E EE+  E + K  + E    ++ +E  EK  ++ E +  ++ 
Sbjct: 714 SMREREKKMREEEEMMREQEEKMQEQEEKMQEQE----EEMWEQEEKMWEQEEKMWEQQR 769

Query: 524 TPKQKEKKIKKQEDSDKDSD-EEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVK 582
            P+QKEK  + ++  +++   E+EEK +++EE     + +    EE M            
Sbjct: 770 LPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKM------------ 817

Query: 583 YGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQK 642
             RG+ +K++    K                 W      W + ++ +W  ++   +K Q 
Sbjct: 818 --RGQEEKMWGQEEKM----------------WGQEEKMWGQEEK-MWGQEEKMEEKMQG 858

Query: 643 KKAKNKEDSEK---DEKRDEERQKSKRGR 668
           ++ K +E  EK    E++  E+++  RG+
Sbjct: 859 QEEKMREQEEKMRGQEEKMREQEEKMRGQ 887



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 90/480 (18%), Positives = 207/480 (43%), Gaps = 45/480 (9%)

Query: 424 LEESM----EEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNS 479
           L+E M    EE  + ++++   E K   +E      E +  E E K  R  +R+      
Sbjct: 270 LQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQEKE 329

Query: 480 IKKEIEEEKTEDKLKDNDTENKDVDD---DYETAEKKENELLLGRKNTPKQKEKKIKKQE 536
           ++++ +E + + +L++ + + ++ ++   + E   +++ E +  ++    ++EK++++QE
Sbjct: 330 LREQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQE 389

Query: 537 DSDKDSD----EEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIY 592
              +D +    E++E+ +E+EE   + +   E+ E+  E      + K++    KT+   
Sbjct: 390 QKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMRE------EKKMQEQEKKTRDQE 443

Query: 593 EASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGG------PKKKQK---- 642
           E   +   I + E            + ++  K +  +W  ++        P++K+K    
Sbjct: 444 EKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQ 503

Query: 643 KKAKNKEDS--EKDEK-RDEER---QKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSC 696
           +K + +E+   E++EK RD+E    Q+ K  R          M     K  + E K    
Sbjct: 504 EKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKM--- 560

Query: 697 SSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKEND---RTQMQ 753
               + E+ +EK    +E    D+ EK       +  E+  +    +++E +   + Q +
Sbjct: 561 ---WDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEE 617

Query: 754 PLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFG 813
            ++  + ++ E E+ +Q    KM + EE   E E+    + R  + K+   E  K+    
Sbjct: 618 KMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQE 677

Query: 814 QNEAGSEPHIEAHSLELSSLDNKNFSSATE---DEIDQCVKEKKLKRKILGQSSPEKKIR 870
           + +   E   E   +E  + + +  +   E   +E     +EKK++ +       E+K++
Sbjct: 678 KMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEMMREQEEKMQ 737



 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 89/451 (19%), Positives = 184/451 (40%), Gaps = 70/451 (15%)

Query: 152 EDEKEEESSEE--EDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKD 209
           E EK +E  E+  E E+K R  +E+ G+        E+  W           + +  ++D
Sbjct: 502 EQEKMQEQEEKIWEQEEKIRDQEEMWGQ--------EKKMWR---------QEKMREQED 544

Query: 210 QCLVRSFIDSKFYSIARKDIKEVDILNLPESELSTKPGLQKASIFLKTRVVPDNWKMDIS 269
           Q   +   + K     +K   + + +     E   K   Q+  +  + R+     KM   
Sbjct: 545 QMWEQ---EEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREE 601

Query: 270 EILESSSSDDEDGPAEENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTP 329
           E +     +      E+  E++EK  ++ E+   +EE   E+ +   +Q  K  E +  P
Sbjct: 602 EEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLP 661

Query: 330 INKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAY 389
             K  +  ++ +   +  +               +W+Q  M+              KT  
Sbjct: 662 EQKEKLWEHEKMQEQEKMQ----------EQEEKIWEQEKME-------------KKTQE 698

Query: 390 RKYLYGFEEYCRSANIQFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKS-EPE 448
           ++     +E  R    +  ++   E K++EE++ + E  E+  + +++M   E +  E E
Sbjct: 699 QEKKTWDQEKMR----EEESMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEEMWEQE 754

Query: 449 ENIDSNSESEREEIELKSPRGRRRIARDVNSIKKEIEEEK---TEDKLKDNDTENKDVDD 505
           E +    E   E+  L  P  + ++       +K  E+EK    E+K++D + + +  ++
Sbjct: 755 EKMWEQEEKMWEQQRL--PEQKEKLWEH----EKMQEQEKIWEQEEKMRDQEEKMRGQEE 808

Query: 506 DYETAEKK---ENELLLGRKNTPKQKEKKIKKQEDSDKDSDEE-EEKSQEREETESKCDS 561
                E+K   + E + G++     +E+K+  QE+     +E+ EEK Q +EE   + + 
Sbjct: 809 KMRGQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQEE 868

Query: 562 EGEEDEEDMEPCLTGTKVKVKYGRGKTQKIY 592
           +    EE M       + + +  RG+ +KIY
Sbjct: 869 KMRGQEEKM-------REQEEKMRGQEEKIY 892


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 100/493 (20%), Positives = 211/493 (42%), Gaps = 26/493 (5%)

Query: 406 QFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELK 465
           Q   +   E +++E++K+L E  +E  +  +     E   E EE +    E  RE+ E  
Sbjct: 274 QEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKM 333

Query: 466 SPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKK-ENELLLGRKNT 524
             +  R   ++    ++E +    E+++ + D   ++ ++     EK  E E  +  +  
Sbjct: 334 WRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEER 393

Query: 525 PKQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKV--- 581
            +++EKK++++E++ +   E+EEK Q++EE   +     +E++E  +  L   K K+   
Sbjct: 394 IREREKKMREEEETMR---EQEEKMQKQEENMWE-----QEEKEWQQQRLPEQKEKLWEQ 445

Query: 582 KYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQ 641
           +  + + +KI+E   +  +I D E ++      W  R ++  + +  +W  ++    ++Q
Sbjct: 446 EKMQEQEEKIWE---QEEKIRDQEEMWGQEKKMW--RQEKMREQEDQMWEQEEKMRDQEQ 500

Query: 642 KKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSE 701
           K   + +   E+DE+    R+K +R R   K            KT   E K+        
Sbjct: 501 KMWDQEERMWEQDERL---REKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMR 557

Query: 702 TEDAL---EKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETL 758
            E+ +   EK +  EE  ++++ EK +   ++K+ E+  K+     K  ++ +    +  
Sbjct: 558 EEERMREREKKMREEEEMMREQEEKMQE-QEEKMREQEEKMWEQEEKMQEQEEKMWEQEE 616

Query: 759 KLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAG 818
           K+   E E  +Q     M + EE  +E E+    +  + + ++  +   +    GQ E  
Sbjct: 617 KMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKM 676

Query: 819 SEPHIEAHSLELSSLDNKNFSSATEDEI-DQCVKEKKLKRKILGQSS-PEKKIRIENGME 876
            E   +    E    + +      E+++  Q  K    + K+ GQ    EK+ RI +  E
Sbjct: 677 REQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRDQKE 736

Query: 877 MTNTVSQERTSDC 889
                  E    C
Sbjct: 737 KMQERLPEHEERC 749



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 47/266 (17%)

Query: 414 EPKVKEEKKDLEES-----MEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPR 468
           E K++EEKK  E+       EE ++ ++ M   E K   EE +    E + +E E K   
Sbjct: 533 EEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKM-- 590

Query: 469 GRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQK 528
                 R+      E EE+  E + K  + E K  + + E   +++ E++  ++   +++
Sbjct: 591 ------REQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQ 644

Query: 529 EKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKT 588
           E+K+ +QE+  +   E+EEK +E+EE     + +  E EE M+      + + +  RG+ 
Sbjct: 645 EEKMWEQEEKMR---EQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQE 701

Query: 589 QKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNK 648
           +K+                       W      W + ++ +W     G ++ ++K+ + +
Sbjct: 702 EKM-----------------------WGQEEKMWGQEEK-MW-----GQEEMREKEERIR 732

Query: 649 EDSEKDEKR--DEERQKSKRGRPPLK 672
           +  EK ++R  + E + S+   PP K
Sbjct: 733 DQKEKMQERLPEHEERCSEPCLPPSK 758



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 39/181 (21%), Positives = 87/181 (48%), Gaps = 7/181 (3%)

Query: 406 QFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESER---EEI 462
           Q   +   E K++E+++ + E  E+  + +++M   E K   +E  D   E E    E+ 
Sbjct: 579 QEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQE 638

Query: 463 ELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKK---ENELLL 519
           E    +  +   ++    ++E +  + E+K++  + + ++ ++  +  E+K   + E + 
Sbjct: 639 EKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMR 698

Query: 520 GRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQE-REETESKCDSEGEEDEEDMEPCLTGTK 578
           G++     +E+K+  QE+     +E  EK +  R++ E   +   E +E   EPCL  +K
Sbjct: 699 GQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRDQKEKMQERLPEHEERCSEPCLPPSK 758

Query: 579 V 579
           V
Sbjct: 759 V 759


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 109/511 (21%), Positives = 185/511 (36%), Gaps = 105/511 (20%)

Query: 433 KLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSIKKEIEEEKTEDK 492
           KL    P+ +   +   + DS   SE EE E++ P  ++     V + +  +   K   K
Sbjct: 67  KLQANGPVAKKAKKKASSSDSEDSSEEEE-EVQGPPAKKAA---VPAKRVGLPPGKAAAK 122

Query: 493 LKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQER 552
             ++ +  +  DDD E  +KK+  +  G K   K  +   KK + SD DSD   E     
Sbjct: 123 ASESSSSEESSDDDDEEDQKKQ-PVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSE----- 176

Query: 553 EETESKCDSEGEEDEEDMEPCLTGTKVKV-------------KYGRGKTQKIYEASIKST 599
                      +E  ++ +P +T   VK              K   GK      +S  S+
Sbjct: 177 -----------DEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSS 225

Query: 600 EIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKK------------QKKKAKN 647
             DD E                    ++      K  PKK+              +K+ +
Sbjct: 226 SSDDSE-------------------EEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSS 266

Query: 648 KEDSEKDEKRDEER-QKSKRG---------RPPLKSTLSSNMPYGL----SKTANSEGKS 693
            EDS  DE+ ++++  K+K G          PP K +L +  P           +SE  S
Sbjct: 267 SEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSS 326

Query: 694 DSCSSDSETEDALEKNLINEELSLKD-------ELEKNENLNDDKLDEENPKISAHILKE 746
           D   S SE E       +  + + K        E   + + +D   D+E P   A   K 
Sbjct: 327 DESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKN 386

Query: 747 NDR--------TQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSK 798
           +            ++P    K  VG  ++++    +     EE     E+  K     +K
Sbjct: 387 SSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTK 446

Query: 799 TKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRK 858
            K  +   + + +  Q   GS           SS D+ + SS  E+E       KK  +K
Sbjct: 447 PKATAKAALSLPA-KQAPQGSRD---------SSSDSDSSSSEEEEEKTSKSAVKKKPQK 496

Query: 859 ILGQSSPEKKIRIENG-MEMTNTVSQERTSD 888
           + G ++P K    + G  E +N+ S + +S+
Sbjct: 497 VAGGAAPSKPASAKKGKAESSNSSSSDDSSE 527



 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 125/655 (19%), Positives = 241/655 (36%), Gaps = 99/655 (15%)

Query: 619  YDEWVKADRIIW-PLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQ--KSKRGRPPLKSTL 675
            Y  W+K+ ++    L   GP  K+ KK  +  DSE   + +EE Q   +K+   P K   
Sbjct: 54   YSFWLKSAKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRV- 112

Query: 676  SSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINE-------------ELSLKDELE 722
               +P G +    SE  S   SSD + E+  +K  + +             + +   + +
Sbjct: 113  --GLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSD 170

Query: 723  KNENLNDDKLDEENPKISAHILKENDRTQMQPLETL-KLEVGENEQIVQIFGNKMEKTEE 781
             + +  D+    + PKI+   +K   +   +P     K+  G+         +     + 
Sbjct: 171  SDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDS 230

Query: 782  VKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSA 841
             +++A  +PK      KT      + K       +A + P  ++ S E SS D       
Sbjct: 231  EEEKAAATPK------KTVPKKQVVAK----APVKAATTPTRKSSSSEDSSSDE------ 274

Query: 842  TEDEIDQCVKEK------------KLKRKILGQSSPEKKIRIENGMEMTNTVSQER---- 885
             E+E  + +K K               +K LG   P+K +  +  +E +   S E     
Sbjct: 275  -EEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSS 333

Query: 886  -------TSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQQ---LTSERFDSPAE 935
                   T   +     K    ++  E  ++   S  +E ++   +    T    + PA 
Sbjct: 334  EEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAV 393

Query: 936  ETVNIPLK-EDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIED-------VAVESSESNS 987
             T +  +K       P+ G + L+  + D    +E+  +S E+            + + +
Sbjct: 394  TTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKA 453

Query: 988  LVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGL-CERESA 1046
             +S+P    P    + S  S  + S++E     S+S +  +   +A  +        +  
Sbjct: 454  ALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKT-SKSAVKKKPQKVAGGAAPSKPASAKKG 512

Query: 1047 NGFETNVASGTCSIIVQERESREKGQKRP----SDGNSGLMAK-------KQKRTPKRTS 1095
                +N +S   S   +E + + KG  RP    ++G S L A+        ++   ++  
Sbjct: 513  KAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKK 572

Query: 1096 AAAKNEKNGT------GQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIK 1149
            AA    K+G+       +++   + P        TP       K +K A SP R    ++
Sbjct: 573  AAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNTFPKRKKGEKRASSPFR---RVR 629

Query: 1150 DGEKDKHREKHPNS----SPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYY 1200
            + E +       NS          W  + N++  +  T+  SF  EK ++ R  Y
Sbjct: 630  EEEIEVDSRVADNSFDAKRGAAGDWGERANQV--LKFTKGKSFRHEKTKKKRGSY 682



 Score = 32.7 bits (73), Expect = 2.2
 Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 445 SEPEENIDSNSESEREEIELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVD 504
           S  EE+  S  E  ++ +    P+   + A    S+  +   + + D   D+D+ + + +
Sbjct: 425 SSEEESSSSEEEKTKKMVATTKPKATAKAAL---SLPAKQAPQGSRDSSSDSDSSSSEEE 481

Query: 505 DDYET---AEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQER 552
           ++  +    +KK  ++  G   +     KK K +  +   SD+  E+ +E+
Sbjct: 482 EEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
            sapiens]
          Length = 1843

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 165/890 (18%), Positives = 346/890 (38%), Gaps = 149/890 (16%)

Query: 416  KVKEEKKDLEESMEEALKLDQEMPLTEV--KSEPEENIDSNSESEREEIELKSPRGRRRI 473
            K++  +++LEE  E+ L   QE+   E+  K   +EN++  S++    +        R  
Sbjct: 259  KIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREK 318

Query: 474  ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIK 533
            A  V+ ++ E+   K  ++L D +     V++      K++N++LL  K   + + +  +
Sbjct: 319  AVRVDKLESEVSRYK--ERLHDIEFYKARVEE-----LKEDNQVLLETKTMLEDQLEGTR 371

Query: 534  KQEDSDKDSDEEEEKSQER-EETESKCDSEGEEDEEDMEPCLTGTKVKVKYGR------- 585
             + D   + ++E  + + +  + E + D + ++ EE ME  +T  ++  K          
Sbjct: 372  ARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMT-LEMAQKQSMDESLHLG 430

Query: 586  ------GKTQKIYEASIKST--EIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGP 637
                   +T ++ EA  KS   E+++     L+     N    + V+  R      +G  
Sbjct: 431  WELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNA 490

Query: 638  KKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCS 697
             K  K + +N+  S+K E  + E  + K+     ++         LSK        D   
Sbjct: 491  SKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQN---------LSK--------DLMK 533

Query: 698  SDSETEDALEKNLINEELSLKDELEKNENLNDDKLD-EENPKISAH-----------ILK 745
              ++ E  +E    N E  +K   ++NE+LN       +  +ISA            IL 
Sbjct: 534  EKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILH 593

Query: 746  ENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPK-GKGRRSKTKDLSL 804
            E+ +     L  ++ E  + ++ ++ +  K E+ EE++ E     K  +  + K  +L +
Sbjct: 594  ESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKI 653

Query: 805  EIIKISSFGQNEAGSEPH-----------------IEAHSLELSSLDNKNFSSATEDEID 847
               KI +  Q  +  E                   +E+   E S LD +N       E  
Sbjct: 654  TCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESL 713

Query: 848  QCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERE 907
            +C   K  + ++  +    +K +++ G+E+     ++     +  +G+         + E
Sbjct: 714  KCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGL---------DIE 764

Query: 908  NEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDL 967
            N+ +   +  SN+ IQQL SE  D   E   N  L+++ + + +            L+ L
Sbjct: 765  NQRLQKTLENSNKKIQQLESELQDLEME---NQTLQKNLEELKISSKR--------LEQL 813

Query: 968  DEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITI 1027
            ++++K+  ++ +    +   L                        + E++ ++ +++I  
Sbjct: 814  EKENKSLEQETSQLEKDKKQL------------------------EKENKRLRQQAEIK- 848

Query: 1028 EVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGLMAKKQ 1087
              D+  EE+   +   E  N                +  S+E G  + S      + K+ 
Sbjct: 849  --DTTLEENNVKIGNLEKEN----------------KTLSKEIGIYKESCVRLKELEKEN 890

Query: 1088 KRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPH 1147
            K   KR +   K       +   SE L     ++    + H    + +K+  +  R+  H
Sbjct: 891  KELVKRATIDIKTLVT-LREDLVSEKLKTQQMNNDLEKLTH----ELEKIGLNKERLL-H 944

Query: 1148 IKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEV 1207
             +    D   +   +    T K S ++ E       E+I+ L+ +L+E   Y   L+ E+
Sbjct: 945  DEQSTDDSRYKLLESKLESTLKKSLEIKE-------EKIAALEARLEESTNYNQQLRQEL 997

Query: 1208 ATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257
             T+ +  + LK++  E     +S   +  D      S    + +L V+ R
Sbjct: 998  KTVKKNYEALKQRQDEERMVQSSPPISGEDNKWERESQETTRELLKVKDR 1047



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 122/569 (21%), Positives = 226/569 (39%), Gaps = 49/569 (8%)

Query: 704  DALEKNLINEELSLKDELEK-NENLNDD-KLDEENPKISAHILKENDRTQMQPLETLKLE 761
            D +  N +  +++ K E ++ N+ +N+D  L   N  I    +K   +  +Q L  + L 
Sbjct: 44   DGVFLNQVMLQINPKLESQRVNKKVNNDASLRMHNLSILVRQIKFYYQETLQQLIMMSLP 103

Query: 762  VGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEP 821
               N  I+       + TEEVKK       G   + + K+  +E I+   F   +A    
Sbjct: 104  ---NVLIIGKNPFSEQGTEEVKKLLLLL-LGCAVQCQKKEEFIERIQGLDF-DTKAAVAA 158

Query: 822  HIE--AHSLE-LSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKIRI------E 872
            HI+   H+ E +  L     +  ++++I+  +K   L  K L     E    I       
Sbjct: 159  HIQEVTHNQENVFDLQWMEVTDMSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEER 218

Query: 873  NGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQQLTSERFDS 932
            +G+      S    S C GS GMK     QH   E     + I    Q +++ T +  D 
Sbjct: 219  DGLHFLPHASSSAQSPC-GSPGMKRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDC 277

Query: 933  PAE-ETVNIPLK--EDEDAMPLIGPETLVCHEVDLDDLDEK----DKTSIEDVAVESSES 985
              E E + I LK  + E+   L    +   +  +LD L EK    DK   E V+      
Sbjct: 278  KQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREKAVRVDKLESE-VSRYKERL 336

Query: 986  NSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGLCERES 1045
            + +      +  + + N  +    T+ +D+    ++ SD   E++    + +  L + E 
Sbjct: 337  HDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDME- 395

Query: 1046 ANGFETNVASGTCSIIVQERESREKGQKRPSDG--NSGLMAKKQKRTPKRTSAAAKNEKN 1103
                E ++       +++E  + E  QK+  D   + G   ++  RT + + A  K+  +
Sbjct: 396  ---MERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGH 452

Query: 1104 GTGQSSDSEDLPV-LDNSSKCTPVKHL---------NVSKPQKLARSPARISPHIKDGEK 1153
               + + S  L + ++N S    V+ L         N SK  K+ +   R+S  ++  E 
Sbjct: 453  EVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILEN 512

Query: 1154 DKHREKH-----PNSSPRTYKWSFQLN---ELDNMNSTERISFLQEKLQEIRKYYMSLKS 1205
            +  +EK       N S    K   QL    E    NS  +I  L+++ + + +   SL+ 
Sbjct: 513  EIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQ 572

Query: 1206 EVATIDRRRKRLKKKDREVSHAGASMSSA 1234
                    R +  +K+ ++ H     +S+
Sbjct: 573  RSQISAEARVKDIEKENKILHESIKETSS 601



 Score = 32.0 bits (71), Expect = 3.8
 Identities = 77/409 (18%), Positives = 144/409 (35%), Gaps = 56/409 (13%)

Query: 408  RTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSP 467
            R +H  +       K LE  +E  LK   E+   ++ +      +S + +++   ELK+ 
Sbjct: 941  RLLHDEQSTDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKT- 999

Query: 468  RGRRRIARDVNSIKKEIEEEKTEDKL-----KDNDTENKDVDDDYETAEKKENELLLGRK 522
                 + ++  ++K+  +EE+          +DN  E +  +   E  + K+  + + R 
Sbjct: 1000 -----VKKNYEALKQRQDEERMVQSSPPISGEDNKWERESQETTRELLKVKDRLIEVERN 1054

Query: 523  NTPKQKEKKIKKQEDSDKDSDEEEEKSQ-----------EREETESKCDSEGEEDE---- 567
            N   Q EK+  K +    ++     ++Q           + + T  +  +   + E    
Sbjct: 1055 NATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTL 1114

Query: 568  EDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE---------IDDGEVLYLVHYYGWNVR 618
                  L     ++   +   +   E+ IK  E         I D E L L+H       
Sbjct: 1115 NSQSTSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKDHEKLELLHER----- 1169

Query: 619  YDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKD-EKRDEERQKSKRGRPPLKSTLSS 677
                 +A      + K G  K      KN E   +D E R  +  K K     L+  L  
Sbjct: 1170 -----QASEYESLISKHGTLKSAH---KNLEVEHRDLEDRYNQLLKQKGQLEDLEKMLKV 1221

Query: 678  NMPYGLSKTANSEGKSDS----CSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLD 733
                 L +  N E  +      C  +        + L   E+   D       LN+ KL 
Sbjct: 1222 EQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKETEVLQTDHKNLKSLLNNSKL- 1280

Query: 734  EENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEV 782
             E  ++ A   K  ++ Q   + + KL   + E + Q+ GN  E+   +
Sbjct: 1281 -EQTRLEAEFSKLKEQYQQLDITSTKLN-NQCELLSQLKGNLEEENRHL 1327


>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
          Length = 1758

 Score = 68.2 bits (165), Expect = 5e-11
 Identities = 169/821 (20%), Positives = 307/821 (37%), Gaps = 116/821 (14%)

Query: 417  VKEEKKDLE----ESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRG--- 469
            V++E  D E    +S+ E  K +++ P  +      +N D ++ S++E I +K  +G   
Sbjct: 952  VRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKN-DGSAVSKKENI-VKPAKGPQE 1009

Query: 470  -----RRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNT 524
                 R R  R    IKK  EE    D  K + +  KD +    T  K  ++     + T
Sbjct: 1010 KVDGERERSPRSEPPIKKAKEETPKTDNTKSSSSSQKD-EKITGTPRKAHSKSAKEHQET 1068

Query: 525  PKQKEKKIKKQEDSDKDSDE---EEEKSQEREETESKCDSEGEE-----DEEDMEPCLTG 576
               KE+K+KK    D  S++   +EEK+++  E     D++GE+     +E+ ++     
Sbjct: 1069 KPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFES 1128

Query: 577  TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIW--PLDK 634
            + +K+   + +  +I + S K     D E            + D   + D+I    P  K
Sbjct: 1129 SSMKIS--KLEVTEIVKPSPKRKMEPDTE------------KMDRTPEKDKISLSAPAKK 1174

Query: 635  GGPKKKQKKK-------AKNKEDSEKDE----KRDEERQKSKRGRPPLKSTLSSNMPYGL 683
                ++  KK       +  KE SEK E    K  +E+ K K  R    +  SS+     
Sbjct: 1175 IKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDY 1234

Query: 684  SKTANSEG----KSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKI 739
            + T+++ G    KS+  +    T     +   N+  +  +++     +   K D+++ + 
Sbjct: 1235 TSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFES 1294

Query: 740  SAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSK- 798
                 +E D    QP+ +    VG+   +++   N   K   + K  EK  +   +  K 
Sbjct: 1295 -----EEEDVKSTQPISS----VGKPASVIK---NVSTKPSNIVKYPEKESEPSEKIQKF 1342

Query: 799  TKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKR- 857
            TKD+S EII+        + S    +    + S L+ +N          Q  KE  L R 
Sbjct: 1343 TKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKENPEKRKNST--QPEKESNLDRL 1400

Query: 858  ------KILGQSSPEKKI-------RIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHF 904
                  K L QSS E +        R  +  + T    ++   D       K  + +   
Sbjct: 1401 NEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNEL 1460

Query: 905  ERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHE--- 961
             R  +  PS   +S    +    E  D P + T +        +      +    ++   
Sbjct: 1461 TRRKDS-PSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKR 1519

Query: 962  -------VDLDDLDEKDKTSIEDVAVESSESNSLVSI--PPALPPVVQHNFSVASPLTLS 1012
                   VD +   +++K  +E    + S  N L+ I  PP      +         T+ 
Sbjct: 1520 PNEETKSVDKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVK 1579

Query: 1013 QDE--SRSVKSESDITIEVDSIAEESQEGLCERESANGFETNVASGTCS------IIVQE 1064
                 S S +  SD+T E D  A E      + ES    +   +SG  S      I+ + 
Sbjct: 1580 PKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKA 1639

Query: 1065 RESREK------GQKRPSDGNSGLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLD 1118
            +ES +       G  R    +S  ++  +  +P  +   + +    + +S DS+      
Sbjct: 1640 KESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSK------ 1693

Query: 1119 NSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHREK 1159
               K    K     K  K  +  A     ++  +K KH++K
Sbjct: 1694 KKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKK 1734



 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 117/533 (21%), Positives = 200/533 (37%), Gaps = 92/533 (17%)

Query: 415  PKVKEEKKDLEESMEEALKLDQEM-----PLTEVK--SEPEENIDSNSESEREEIELKSP 467
            P+ K +K D E S EE +K  Q +     P + +K  S    NI    E E E  E    
Sbjct: 1283 PQSKWDKDDFE-SEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSE---- 1337

Query: 468  RGRRRIARDVNSIKKEI-EEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK 526
                +I +    +  EI + E    K   +  + K  D DY   EK+  E    RKN+  
Sbjct: 1338 ----KIQKFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKENPE---KRKNS-T 1389

Query: 527  QKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRG 586
            Q EK+      +++ + +   +S +   T  K DS      +D  P              
Sbjct: 1390 QPEKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTP-------------- 1435

Query: 587  KTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAK 646
                      K T+ D  E       Y  + R DE  +  R          +K    + K
Sbjct: 1436 -------NRDKKTDYDTRE-------YSSSKRRDEKNELTR----------RKDSPSRNK 1471

Query: 647  NKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDAL 706
            +    +K++ R EER   K+G    K + SS  P    K  + +   D+   + ET+ ++
Sbjct: 1472 DSASGQKNKPR-EERDLPKKGTGDSKKSNSS--PSRDRKPHDHKATYDTKRPNEETK-SV 1527

Query: 707  EKNLINEE----LSLKDELEKNEN-----LNDDKLDEENPKISAHILKENDRTQMQPLET 757
            +KN   +     L  ++  E + N     LN  +   E  +I+  I K   + + Q   +
Sbjct: 1528 DKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHS 1587

Query: 758  LKL-------------EVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSL 804
             +L             E   NE   +   N   K EE      K  K K      + L  
Sbjct: 1588 SRLSSDLTRETDEAAFEPDYNESDSE--SNVSVKEEESSGNISKDLKDKIVEKAKESLDT 1645

Query: 805  EIIKISSFGQNEAGSEPHI---EAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILG 861
              +      +N++ S P +    +HS   S   + + S+++ +  D   K+KK ++K   
Sbjct: 1646 AAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHK 1705

Query: 862  QSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSL 914
            +    KK +   G E+    SQ+        +  KN + E+  E++++ + S+
Sbjct: 1706 KHKKHKKHKKHAGTEVELEKSQKHKHK--KKKSKKNKDKEKEKEKDDQKVKSV 1756



 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 131/695 (18%), Positives = 250/695 (35%), Gaps = 100/695 (14%)

Query: 529  EKKIKKQEDSDKDSDEEEEKSQEREETESKCDS--------EGEEDEEDMEPCLTGTKVK 580
            EK   +   + KD+ + +EK  E    + K +         +GEE E  + P L  T  K
Sbjct: 866  EKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRK 925

Query: 581  VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKK 640
             +   G  +   ++       DD   +        ++ +    + D+     ++  PK K
Sbjct: 926  SREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDK----RERDKPKAK 981

Query: 641  -QKKKAKN-------KEDSEK-----DEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTA 687
              K K KN       KE+  K      EK D ER++S R  PP+K           +K++
Sbjct: 982  GDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKSS 1041

Query: 688  NSEGK------------SDSCSSDSETEDALE--------KNLINEELSLKDELEKNENL 727
            +S  K            S S     ET+   E        K++ +E+L+ K+E  K  N 
Sbjct: 1042 SSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNE 1101

Query: 728  NDDKLDEENPKISAHILK-------ENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780
             +  LD +  K      +       E+   ++  LE  ++     ++ ++    KM++T 
Sbjct: 1102 KNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTP 1161

Query: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
            E  K +  +P  K             IK++     + GS  +I         L+      
Sbjct: 1162 EKDKISLSAPAKK-------------IKLNRETGKKIGSTENISNTKEPSEKLE------ 1202

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
            +T  ++ Q   + K++RK+ G       + ++     +   S  R S+         +  
Sbjct: 1203 STSSKVKQEKVKGKVRRKVTGTEGSSSTL-VDYTSTSSTGGSPVRKSEEKTDTKRTVIKT 1261

Query: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960
             + +  +N    +  AE    + Q+   ++D    E+    +K  +    +  P +++  
Sbjct: 1262 MEEYNNDN----TAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVI-- 1315

Query: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALP-PVVQHNFSVASPLTLSQDESRSV 1019
                 ++  K    ++    ES  S  +      +   ++QH   V S    +  E    
Sbjct: 1316 ----KNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQH--EVKSSKNSASSEKGKT 1369

Query: 1020 KSESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESR--EKGQKRPSD 1077
            K      +E ++  +       E+ES N    N      S+    +E+R  +K     + 
Sbjct: 1370 KDRDYSVLEKENPEKRKNSTQPEKES-NLDRLNEQGNFKSLSQSSKEARTSDKHDSTRAS 1428

Query: 1078 GNSGLMAKKQKRTPKRT----SAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSK 1133
             N      + K+T   T    S+  ++EKN   +  DS       N    +  K    +K
Sbjct: 1429 SNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPS----RNKDSASGQK----NK 1480

Query: 1134 PQKLARSPARISPHIKDGEKDKHREKHPNSSPRTY 1168
            P++    P + +   K       R++ P+    TY
Sbjct: 1481 PREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATY 1515


>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
          Length = 1792

 Score = 68.2 bits (165), Expect = 5e-11
 Identities = 169/821 (20%), Positives = 307/821 (37%), Gaps = 116/821 (14%)

Query: 417  VKEEKKDLE----ESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRG--- 469
            V++E  D E    +S+ E  K +++ P  +      +N D ++ S++E I +K  +G   
Sbjct: 986  VRDEPMDAESITFKSVSEKDKRERDKPKAKGDKTKRKN-DGSAVSKKENI-VKPAKGPQE 1043

Query: 470  -----RRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNT 524
                 R R  R    IKK  EE    D  K + +  KD +    T  K  ++     + T
Sbjct: 1044 KVDGERERSPRSEPPIKKAKEETPKTDNTKSSSSSQKD-EKITGTPRKAHSKSAKEHQET 1102

Query: 525  PKQKEKKIKKQEDSDKDSDE---EEEKSQEREETESKCDSEGEE-----DEEDMEPCLTG 576
               KE+K+KK    D  S++   +EEK+++  E     D++GE+     +E+ ++     
Sbjct: 1103 KPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFES 1162

Query: 577  TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIW--PLDK 634
            + +K+   + +  +I + S K     D E            + D   + D+I    P  K
Sbjct: 1163 SSMKIS--KLEVTEIVKPSPKRKMEPDTE------------KMDRTPEKDKISLSAPAKK 1208

Query: 635  GGPKKKQKKK-------AKNKEDSEKDE----KRDEERQKSKRGRPPLKSTLSSNMPYGL 683
                ++  KK       +  KE SEK E    K  +E+ K K  R    +  SS+     
Sbjct: 1209 IKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDY 1268

Query: 684  SKTANSEG----KSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKI 739
            + T+++ G    KS+  +    T     +   N+  +  +++     +   K D+++ + 
Sbjct: 1269 TSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFES 1328

Query: 740  SAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSK- 798
                 +E D    QP+ +    VG+   +++   N   K   + K  EK  +   +  K 
Sbjct: 1329 -----EEEDVKSTQPISS----VGKPASVIK---NVSTKPSNIVKYPEKESEPSEKIQKF 1376

Query: 799  TKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKR- 857
            TKD+S EII+        + S    +    + S L+ +N          Q  KE  L R 
Sbjct: 1377 TKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKENPEKRKNST--QPEKESNLDRL 1434

Query: 858  ------KILGQSSPEKKI-------RIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHF 904
                  K L QSS E +        R  +  + T    ++   D       K  + +   
Sbjct: 1435 NEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNEL 1494

Query: 905  ERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHE--- 961
             R  +  PS   +S    +    E  D P + T +        +      +    ++   
Sbjct: 1495 TRRKDS-PSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKR 1553

Query: 962  -------VDLDDLDEKDKTSIEDVAVESSESNSLVSI--PPALPPVVQHNFSVASPLTLS 1012
                   VD +   +++K  +E    + S  N L+ I  PP      +         T+ 
Sbjct: 1554 PNEETKSVDKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVK 1613

Query: 1013 QDE--SRSVKSESDITIEVDSIAEESQEGLCERESANGFETNVASGTCS------IIVQE 1064
                 S S +  SD+T E D  A E      + ES    +   +SG  S      I+ + 
Sbjct: 1614 PKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKA 1673

Query: 1065 RESREK------GQKRPSDGNSGLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLD 1118
            +ES +       G  R    +S  ++  +  +P  +   + +    + +S DS+      
Sbjct: 1674 KESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSK------ 1727

Query: 1119 NSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHREK 1159
               K    K     K  K  +  A     ++  +K KH++K
Sbjct: 1728 KKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKK 1768



 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 117/533 (21%), Positives = 200/533 (37%), Gaps = 92/533 (17%)

Query: 415  PKVKEEKKDLEESMEEALKLDQEM-----PLTEVK--SEPEENIDSNSESEREEIELKSP 467
            P+ K +K D E S EE +K  Q +     P + +K  S    NI    E E E  E    
Sbjct: 1317 PQSKWDKDDFE-SEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSE---- 1371

Query: 468  RGRRRIARDVNSIKKEI-EEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK 526
                +I +    +  EI + E    K   +  + K  D DY   EK+  E    RKN+  
Sbjct: 1372 ----KIQKFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKENPE---KRKNS-T 1423

Query: 527  QKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRG 586
            Q EK+      +++ + +   +S +   T  K DS      +D  P              
Sbjct: 1424 QPEKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTP-------------- 1469

Query: 587  KTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAK 646
                      K T+ D  E       Y  + R DE  +  R          +K    + K
Sbjct: 1470 -------NRDKKTDYDTRE-------YSSSKRRDEKNELTR----------RKDSPSRNK 1505

Query: 647  NKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDAL 706
            +    +K++ R EER   K+G    K + SS  P    K  + +   D+   + ET+ ++
Sbjct: 1506 DSASGQKNKPR-EERDLPKKGTGDSKKSNSS--PSRDRKPHDHKATYDTKRPNEETK-SV 1561

Query: 707  EKNLINEE----LSLKDELEKNEN-----LNDDKLDEENPKISAHILKENDRTQMQPLET 757
            +KN   +     L  ++  E + N     LN  +   E  +I+  I K   + + Q   +
Sbjct: 1562 DKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHS 1621

Query: 758  LKL-------------EVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSL 804
             +L             E   NE   +   N   K EE      K  K K      + L  
Sbjct: 1622 SRLSSDLTRETDEAAFEPDYNESDSE--SNVSVKEEESSGNISKDLKDKIVEKAKESLDT 1679

Query: 805  EIIKISSFGQNEAGSEPHI---EAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILG 861
              +      +N++ S P +    +HS   S   + + S+++ +  D   K+KK ++K   
Sbjct: 1680 AAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHK 1739

Query: 862  QSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSL 914
            +    KK +   G E+    SQ+        +  KN + E+  E++++ + S+
Sbjct: 1740 KHKKHKKHKKHAGTEVELEKSQKHKHK--KKKSKKNKDKEKEKEKDDQKVKSV 1790



 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 131/695 (18%), Positives = 250/695 (35%), Gaps = 100/695 (14%)

Query: 529  EKKIKKQEDSDKDSDEEEEKSQEREETESKCDS--------EGEEDEEDMEPCLTGTKVK 580
            EK   +   + KD+ + +EK  E    + K +         +GEE E  + P L  T  K
Sbjct: 900  EKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRK 959

Query: 581  VKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKK 640
             +   G  +   ++       DD   +        ++ +    + D+     ++  PK K
Sbjct: 960  SREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDK----RERDKPKAK 1015

Query: 641  -QKKKAKN-------KEDSEK-----DEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTA 687
              K K KN       KE+  K      EK D ER++S R  PP+K           +K++
Sbjct: 1016 GDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKSS 1075

Query: 688  NSEGK------------SDSCSSDSETEDALE--------KNLINEELSLKDELEKNENL 727
            +S  K            S S     ET+   E        K++ +E+L+ K+E  K  N 
Sbjct: 1076 SSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNE 1135

Query: 728  NDDKLDEENPKISAHILK-------ENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTE 780
             +  LD +  K      +       E+   ++  LE  ++     ++ ++    KM++T 
Sbjct: 1136 KNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTP 1195

Query: 781  EVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSS 840
            E  K +  +P  K             IK++     + GS  +I         L+      
Sbjct: 1196 EKDKISLSAPAKK-------------IKLNRETGKKIGSTENISNTKEPSEKLE------ 1236

Query: 841  ATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNF 900
            +T  ++ Q   + K++RK+ G       + ++     +   S  R S+         +  
Sbjct: 1237 STSSKVKQEKVKGKVRRKVTGTEGSSSTL-VDYTSTSSTGGSPVRKSEEKTDTKRTVIKT 1295

Query: 901  EQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCH 960
             + +  +N    +  AE    + Q+   ++D    E+    +K  +    +  P +++  
Sbjct: 1296 MEEYNNDN----TAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVI-- 1349

Query: 961  EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALP-PVVQHNFSVASPLTLSQDESRSV 1019
                 ++  K    ++    ES  S  +      +   ++QH   V S    +  E    
Sbjct: 1350 ----KNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQH--EVKSSKNSASSEKGKT 1403

Query: 1020 KSESDITIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESR--EKGQKRPSD 1077
            K      +E ++  +       E+ES N    N      S+    +E+R  +K     + 
Sbjct: 1404 KDRDYSVLEKENPEKRKNSTQPEKES-NLDRLNEQGNFKSLSQSSKEARTSDKHDSTRAS 1462

Query: 1078 GNSGLMAKKQKRTPKRT----SAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSK 1133
             N      + K+T   T    S+  ++EKN   +  DS       N    +  K    +K
Sbjct: 1463 SNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPS----RNKDSASGQK----NK 1514

Query: 1134 PQKLARSPARISPHIKDGEKDKHREKHPNSSPRTY 1168
            P++    P + +   K       R++ P+    TY
Sbjct: 1515 PREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATY 1549


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
            sapiens]
          Length = 2191

 Score = 67.4 bits (163), Expect = 8e-11
 Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 251  ASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEEEVPEE-ELDP 309
            AS+ L   + P   K+ +      +   +E  P  E+  +K   +  T E++ +  EL  
Sbjct: 951  ASVGLADMMSPGESKLPLPL---KADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGN 1007

Query: 310  E-ERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQI 368
            E ER  ++ +   FME+RG+P++  P +G K L+LF+L+  V   GG   ++    W+++
Sbjct: 1008 EPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWREL 1067

Query: 369  YMDLGIPILNSAASYNVKTAYRKYLYGFE 397
              +L +   +SAAS ++K  Y +YL+ FE
Sbjct: 1068 ATNLNVGTSSSAAS-SLKKQYIQYLFAFE 1095



 Score = 30.8 bits (68), Expect = 8.5
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 23/96 (23%)

Query: 265  KMDISEILESSSSDDEDGPAEENDEE----KEKEAKKTEEE--------VPEEELDPEER 312
            K D   + + S  ++ED    ++DEE    +E++++KTE +         P+   DP+E+
Sbjct: 1660 KDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEK 1719

Query: 313  DNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFR 348
                +Q  KF        +K P+   K  NLF + R
Sbjct: 1720 P---KQASKF--------DKLPIKIVKKNNLFVVDR 1744


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 67.4 bits (163), Expect = 8e-11
 Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 251  ASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEEEVPEE-ELDP 309
            AS+ L   + P   K+ +      +   +E  P  E+  +K   +  T E++ +  EL  
Sbjct: 938  ASVGLADMMSPGESKLPLPL---KADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGN 994

Query: 310  E-ERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQI 368
            E ER  ++ +   FME+RG+P++  P +G K L+LF+L+  V   GG   ++    W+++
Sbjct: 995  EPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWREL 1054

Query: 369  YMDLGIPILNSAASYNVKTAYRKYLYGFE 397
              +L +   +SAAS ++K  Y +YL+ FE
Sbjct: 1055 ATNLNVGTSSSAAS-SLKKQYIQYLFAFE 1082



 Score = 30.8 bits (68), Expect = 8.5
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 23/96 (23%)

Query: 265  KMDISEILESSSSDDEDGPAEENDEE----KEKEAKKTEEE--------VPEEELDPEER 312
            K D   + + S  ++ED    ++DEE    +E++++KTE +         P+   DP+E+
Sbjct: 1647 KDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEK 1706

Query: 313  DNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFR 348
                +Q  KF        +K P+   K  NLF + R
Sbjct: 1707 P---KQASKF--------DKLPIKIVKKNNLFVVDR 1731


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
            sapiens]
          Length = 1870

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 165/890 (18%), Positives = 348/890 (39%), Gaps = 150/890 (16%)

Query: 416  KVKEEKKDLEESMEEALKLDQEMPLTEV--KSEPEENIDSNSESEREEIELKSPRGRRRI 473
            K++  +++LEE  E+ L   QE+   E+  K   +EN++  S++    +        R  
Sbjct: 259  KIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREK 318

Query: 474  ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIK 533
            A  V+ ++ E+   K  ++L D +     V++      K++N++LL  K   + + +  +
Sbjct: 319  AVRVDKLESEVSRYK--ERLHDIEFYKARVEE-----LKEDNQVLLETKTMLEDQLEGTR 371

Query: 534  KQEDSDKDSDEEEEKSQER-EETESKCDSEGEEDEEDMEPCLTGTKVKVKYGR------- 585
             + D   + ++E  + + +  + E + D + ++ EE ME  +T  ++  K          
Sbjct: 372  ARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMT-LEMAQKQSMDESLHLG 430

Query: 586  ------GKTQKIYEASIKST--EIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGP 637
                   +T ++ EA  KS   E+++     L+     N    + V+  R      +G  
Sbjct: 431  WELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNA 490

Query: 638  KKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCS 697
             K  K + +N+  S+K E  + E  + K+     ++         LSK        D   
Sbjct: 491  SKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQN---------LSK--------DLMK 533

Query: 698  SDSETEDALEKNLINEELSLKDELEKNENLNDDKLD-EENPKISAH-----------ILK 745
              ++ E  +E    N E  +K   ++NE+LN       +  +ISA            IL 
Sbjct: 534  EKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILH 593

Query: 746  ENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPK-GKGRRSKTKDLSL 804
            E+ +     L  ++ E  + ++ ++ +  K E+ EE++ E     K  +  + K  +L +
Sbjct: 594  ESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKI 653

Query: 805  EIIKISSFGQNEAGSEPH-----------------IEAHSLELSSLDNKNFSSATEDEID 847
               KI +  Q  +  E                   +E+   E S LD +N       E  
Sbjct: 654  TCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESL 713

Query: 848  QCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERE 907
            +C   K  + ++  +    +K +++ G+E+     ++     +  +G+         + E
Sbjct: 714  KCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGL---------DIE 764

Query: 908  NEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDL 967
            N+ +   +  SN+ IQQL SE  D   E   N  L+++ + + +            L+ L
Sbjct: 765  NQRLQKTLENSNKKIQQLESELQDLEME---NQTLQKNLEELKISSKR--------LEQL 813

Query: 968  DEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITI 1027
            ++++K+  ++ +    +   L                        + E++ ++ +++I  
Sbjct: 814  EKENKSLEQETSQLEKDKKQL------------------------EKENKRLRQQAEIK- 848

Query: 1028 EVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGLMAKKQ 1087
              D+  EE+   +   E  N                +  S+E G  + S      + K+ 
Sbjct: 849  --DTTLEENNVKIGNLEKEN----------------KTLSKEIGIYKESCVRLKELEKEN 890

Query: 1088 KRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPARISPH 1147
            K   KR +   K       +   SE L     ++    + H    + +K+  +  R+  H
Sbjct: 891  KELVKRATIDIKTLVT-LREDLVSEKLKTQQMNNDLEKLTH----ELEKIGLNKERLL-H 944

Query: 1148 IKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEV 1207
             +    D+++    +    T K S ++ E       E+I+ L+ +L+E   Y   L+ E+
Sbjct: 945  DEQSTDDRYKLLE-SKLESTLKKSLEIKE-------EKIAALEARLEESTNYNQQLRQEL 996

Query: 1208 ATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSPPQNVLAVECR 1257
             T+ +  + LK++  E     +S   +  D      S    + +L V+ R
Sbjct: 997  KTVKKNYEALKQRQDEERMVQSSPPISGEDNKWERESQETTRELLKVKDR 1046



 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 131/696 (18%), Positives = 286/696 (41%), Gaps = 74/696 (10%)

Query: 414  EPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRI 473
            E ++ +EK+ L+     +  L +E      K++ E+ I++  E+   +I++        +
Sbjct: 511  ENEIVQEKQSLQNCQNLSKDLMKE------KAQLEKTIETLRENSERQIKILEQENEH-L 563

Query: 474  ARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIK 533
             + V+S+++   +   E ++KD + ENK + +  +    K +++   ++   K+ E   +
Sbjct: 564  NQTVSSLRQR-SQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKE 622

Query: 534  KQEDSDKDSDEEEEKSQEREETESK-------CDSEGEEDEEDMEPCLTGTKVKVKYGRG 586
            K E +++  +E     +E E  + K       C+     ++E+ E      K+K      
Sbjct: 623  KGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSF 682

Query: 587  K--TQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKK 644
            K  T ++     +++++D+ E L L      NV   +          L+    + ++++ 
Sbjct: 683  KNLTFQLESLEKENSQLDE-ENLELRR----NVESLKCASMKMAQLQLENKELESEKEQL 737

Query: 645  AKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETED 704
             K  E  +   K+ E  + S +G       L   +     K    E +      +++T  
Sbjct: 738  KKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQT-- 795

Query: 705  ALEKNLINEELSLK--DELEKNENLNDDKLDEENPKISAHILKENDRTQMQ------PLE 756
             L+KNL   ++S K  ++LEK EN + ++   +  K    + KEN R + Q       LE
Sbjct: 796  -LQKNLEELKISSKRLEQLEK-ENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLE 853

Query: 757  TLKLEVG----ENEQI---VQIFGNKMEKTEEVKKEAEKSPKGKGRRSKT-----KDLSL 804
               +++G    EN+ +   + I+     + +E++KE ++  K      KT     +DL  
Sbjct: 854  ENNVKIGNLEKENKTLSKEIGIYKESCVRLKELEKENKELVKRATIDIKTLVTLREDLVS 913

Query: 805  EIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSS 864
            E +K      +       +E   L    L +   S+    ++ +   E  LK+ +  +  
Sbjct: 914  EKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDRYKLLESKLESTLKKSL--EIK 971

Query: 865  PEKKIRIENGM-EMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQ 923
             EK   +E  + E TN   Q R       +  + L   Q  ER  +  P +  E N    
Sbjct: 972  EEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSPPISGEDN---- 1027

Query: 924  QLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIEDVAVESS 983
                 +++  ++ET    LK  +    LI  E    +   L    +  KT ++ +  +++
Sbjct: 1028 -----KWERESQETTRELLKVKD---RLIEVER---NNATLQAEKQALKTQLKQLETQNN 1076

Query: 984  ESNS-LVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSES--------DITIEVDSIAE 1034
               + ++++      + + N ++ +     Q E+ ++ S+S         + I+  S+  
Sbjct: 1077 NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLEN 1136

Query: 1035 ESQEGLCERESANG-FETNVASGTCSIIVQERESRE 1069
            E++  + ERE     +++ +       ++ ER++ E
Sbjct: 1137 ENESVIKEREDLKSLYDSLIKDHEKLELLHERQASE 1172



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 122/569 (21%), Positives = 226/569 (39%), Gaps = 49/569 (8%)

Query: 704  DALEKNLINEELSLKDELEK-NENLNDD-KLDEENPKISAHILKENDRTQMQPLETLKLE 761
            D +  N +  +++ K E ++ N+ +N+D  L   N  I    +K   +  +Q L  + L 
Sbjct: 44   DGVFLNQVMLQINPKLESQRVNKKVNNDASLRMHNLSILVRQIKFYYQETLQQLIMMSLP 103

Query: 762  VGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEP 821
               N  I+       + TEEVKK       G   + + K+  +E I+   F   +A    
Sbjct: 104  ---NVLIIGKNPFSEQGTEEVKKLLLLL-LGCAVQCQKKEEFIERIQGLDF-DTKAAVAA 158

Query: 822  HIE--AHSLE-LSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKIRI------E 872
            HI+   H+ E +  L     +  ++++I+  +K   L  K L     E    I       
Sbjct: 159  HIQEVTHNQENVFDLQWMEVTDMSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEER 218

Query: 873  NGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQQLTSERFDS 932
            +G+      S    S C GS GMK     QH   E     + I    Q +++ T +  D 
Sbjct: 219  DGLHFLPHASSSAQSPC-GSPGMKRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDC 277

Query: 933  PAE-ETVNIPLK--EDEDAMPLIGPETLVCHEVDLDDLDEK----DKTSIEDVAVESSES 985
              E E + I LK  + E+   L    +   +  +LD L EK    DK   E V+      
Sbjct: 278  KQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREKAVRVDKLESE-VSRYKERL 336

Query: 986  NSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGLCERES 1045
            + +      +  + + N  +    T+ +D+    ++ SD   E++    + +  L + E 
Sbjct: 337  HDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDME- 395

Query: 1046 ANGFETNVASGTCSIIVQERESREKGQKRPSDG--NSGLMAKKQKRTPKRTSAAAKNEKN 1103
                E ++       +++E  + E  QK+  D   + G   ++  RT + + A  K+  +
Sbjct: 396  ---MERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGH 452

Query: 1104 GTGQSSDSEDLPV-LDNSSKCTPVKHL---------NVSKPQKLARSPARISPHIKDGEK 1153
               + + S  L + ++N S    V+ L         N SK  K+ +   R+S  ++  E 
Sbjct: 453  EVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILEN 512

Query: 1154 DKHREKH-----PNSSPRTYKWSFQLN---ELDNMNSTERISFLQEKLQEIRKYYMSLKS 1205
            +  +EK       N S    K   QL    E    NS  +I  L+++ + + +   SL+ 
Sbjct: 513  EIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQ 572

Query: 1206 EVATIDRRRKRLKKKDREVSHAGASMSSA 1234
                    R +  +K+ ++ H     +S+
Sbjct: 573  RSQISAEARVKDIEKENKILHESIKETSS 601



 Score = 40.4 bits (93), Expect = 0.011
 Identities = 145/756 (19%), Positives = 287/756 (37%), Gaps = 105/756 (13%)

Query: 512  KKENELLLGRKNTPKQKEKKIKKQEDSDKDSDE------EEEKSQEREETESKCDSEGEE 565
            KK   LLLG     ++KE+ I++ +  D D+        +E    +    + +     + 
Sbjct: 122  KKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTDM 181

Query: 566  DEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRY---DEW 622
             +ED+EP L    + +K    +  +  E  I+ +E  DG  L+ + +   + +       
Sbjct: 182  SQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDG--LHFLPHASSSAQSPCGSPG 239

Query: 623  VKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYG 682
            +K       L       K K +   +E  EK E+  + +Q+ ++    LK     NM   
Sbjct: 240  MKRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENM--- 296

Query: 683  LSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKL-DEENPKISA 741
                  S+ +S     D       E + + E+    D+LE   +   ++L D E  K   
Sbjct: 297  ---NLLSDARSARMYRD-------ELDALREKAVRVDKLESEVSRYKERLHDIEFYKARV 346

Query: 742  HILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKD 801
              LKE+++  ++    L+ ++            + +K  E++KE          + K K 
Sbjct: 347  EELKEDNQVLLETKTMLEDQLEGTRA-------RSDKLHELEKE--------NLQLKAKL 391

Query: 802  LSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILG 861
              +E+ +     + E   E ++     +  S+D         ++I +  +  +  +K LG
Sbjct: 392  HDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLG 451

Query: 862  Q------SSPEKKIRIENGMEMTNTVSQERTS-DCIGSEGMKNLNFE---QHFERENEGM 911
                   SS   K+ +EN   +T TV + RT+ D +     K L  E   Q   ++ E +
Sbjct: 452  HEVNELTSSRLLKLEMEN-QSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEIL 510

Query: 912  PSLIAESNQCIQQLTSERFD-----SPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDD 966
             + I +  Q +Q   +   D     +  E+T+    +  E  + ++  E    ++  +  
Sbjct: 511  ENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQT-VSS 569

Query: 967  LDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDIT 1026
            L ++ + S E    +  + N ++          +     +S L+  + E R +K E +  
Sbjct: 570  LRQRSQISAEARVKDIEKENKILH---------ESIKETSSKLSKIEFEKRQIKKELEHY 620

Query: 1027 IEVDSIAEESQEGLCERESANGFE----TNVASGTCSIIVQERESREKGQKRPSDGNSGL 1082
             E    AEE +  L   E  N       TN+      I   E+E+ E             
Sbjct: 621  KEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSE------------- 667

Query: 1083 MAKKQKRTPKRTSAAAKN--------EKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKP 1134
              +++ R  K+T  + KN        EK  +    ++ +L     S KC  +K   +   
Sbjct: 668  -LERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLE 726

Query: 1135 QKLARSPARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNM-------NSTERIS 1187
             K   S        +  +K     K         + S+Q  +++N        NS ++I 
Sbjct: 727  NKELESEK------EQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQ 780

Query: 1188 FLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDRE 1223
             L+ +LQ++     +L+  +  +    KRL++ ++E
Sbjct: 781  QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKE 816



 Score = 33.9 bits (76), Expect = 1.0
 Identities = 98/538 (18%), Positives = 192/538 (35%), Gaps = 66/538 (12%)

Query: 289  EEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPI--NKPPVLGYKDLNLFKL 346
            E+ EKE K  E+E  + E D ++ +   ++L +  E + T +  N   +   +  N    
Sbjct: 811  EQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLS 870

Query: 347  FRLVYHQGGCDNI-----DSGAVWKQIYMDLG--IPILNSAASYNVKT-AYRKYLYGFEE 398
              +  ++  C  +     ++  + K+  +D+   + +     S  +KT      L     
Sbjct: 871  KEIGIYKESCVRLKELEKENKELVKRATIDIKTLVTLREDLVSEKLKTQQMNNDLEKLTH 930

Query: 399  YCRSANIQFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESE 458
                  +    + H E    +  K LE  +E  LK   E+   ++ +      +S + ++
Sbjct: 931  ELEKIGLNKERLLHDEQSTDDRYKLLESKLESTLKKSLEIKEEKIAALEARLEESTNYNQ 990

Query: 459  REEIELKSPRGRRRIARDVNSIKKEIEEEKTEDKL-----KDNDTENKDVDDDYETAEKK 513
            +   ELK+      + ++  ++K+  +EE+          +DN  E +  +   E  + K
Sbjct: 991  QLRQELKT------VKKNYEALKQRQDEERMVQSSPPISGEDNKWERESQETTRELLKVK 1044

Query: 514  ENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQ-----------EREETESKCDSE 562
            +  + + R N   Q EK+  K +    ++     ++Q           + + T  +  + 
Sbjct: 1045 DRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTVSLQEQNTTLQTQNA 1104

Query: 563  GEEDE----EDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTE---------IDDGEVLYL 609
              + E          L     ++   +   +   E+ IK  E         I D E L L
Sbjct: 1105 KLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKDHEKLEL 1164

Query: 610  VHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKD-EKRDEERQKSKRGR 668
            +H            +A      + K G  K      KN E   +D E R  +  K K   
Sbjct: 1165 LHER----------QASEYESLISKHGTLKSAH---KNLEVEHRDLEDRYNQLLKQKGQL 1211

Query: 669  PPLKSTLSSNMPYGLSKTANSEGKSDS----CSSDSETEDALEKNLINEELSLKDELEKN 724
              L+  L       L +  N E  +      C  +        + L   E+   D     
Sbjct: 1212 EDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKETEVLQTDHKNLK 1271

Query: 725  ENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEV 782
              LN+ KL  E  ++ A   K  ++ Q   + + KL   + E + Q+ GN  E+   +
Sbjct: 1272 SLLNNSKL--EQTRLEAEFSKLKEQYQQLDITSTKLN-NQCELLSQLKGNLEEENRHL 1326


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 203/1086 (18%), Positives = 429/1086 (39%), Gaps = 210/1086 (19%)

Query: 229  IKEVDILNLP-ESELSTKPGL--------QKASIFLKTRVVPDNWKMDISEILESSSSDD 279
            +K  ++ N   E+ELS+K  L        +K   ++ ++ + +N KMD+S  LES     
Sbjct: 563  VKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKL-ENIKMDLSYSLESIEDPK 621

Query: 280  EDGPAEENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYK 339
            +      + E    +AK+    +  E L+ +E+   L   YK ME+              
Sbjct: 622  QMKQTLFDAETVALDAKRESAFLRSENLELKEKMKELATTYKQMEN-------------- 667

Query: 340  DLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEY 399
            D+ L++                    K++ +DL   +    +++N  T     + G    
Sbjct: 668  DIQLYQ--------------SQLEAKKKMQVDLEKEL---QSAFNEITKLTSLIDGKVPK 710

Query: 400  CRSANIQFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPL-TEVKSEPEE--NIDSNSE 456
                N++       E K+ + +K+L + +EE   L +E+ L +E+KS P E   +    +
Sbjct: 711  DLLCNLEL------EGKITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQ 764

Query: 457  SEREEIELKSPRGRRRIARDVNS---IKKEIEE-EKTEDKLKDNDTENKDVDDDYETAE- 511
             + EE+ + +    +  +  V+    ++  +EE  KT+D L    +  K  D +++  + 
Sbjct: 765  DKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKT 824

Query: 512  -----KKENELLLGRKNTPKQKEKKIKKQEDSDKDS------------DEEEEKSQEREE 554
                 +++ +++L       Q+   + K+      S             E +EK++E +E
Sbjct: 825  LHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQE 884

Query: 555  TESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYG 614
              ++ +   E+ E       T  + K        Q + E    + E DD + L       
Sbjct: 885  RLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQL------- 937

Query: 615  WNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRD--EERQKSKRGRPPLK 672
                  E ++ +R           K       N     +++ R+  E  ++ +     LK
Sbjct: 938  -----QESLQIER--------DQLKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLK 984

Query: 673  STLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLIN----EELSLKDELEKNENLN 728
            S +S  +   L    N+           ET+D  ++ ++     ++L  K+      ++ 
Sbjct: 985  SKISEEVSRNLHMEENT----------GETKDEFQQKMVGIDKKQDLEAKNTQTLTADVK 1034

Query: 729  DDKLDEENPKISAHILKENDRTQM-----QPLETLKLEVGEN-------EQIVQIFGNKM 776
            D+++ E+  KI + I ++N+  QM        E LK ++ EN       ++ +++ G+++
Sbjct: 1035 DNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDEL 1094

Query: 777  EKTEEV---------KKEAEKSP------------KGKGRRSKTKDLSL----------- 804
            +K +E+         KKE E S             K K ++ + K   L           
Sbjct: 1095 KKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQ 1154

Query: 805  ----EIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKIL 860
                EI  + +  +N+  +  H+E   LEL+   N+N+     +E+    KE+K+ +++ 
Sbjct: 1155 KKINEIENLKNELKNKELTLEHMETERLELAQKLNENY-----EEVKSITKERKVLKEL- 1208

Query: 861  GQSSPEKKIRIENG----MEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIA 916
             Q S E +     G    +E T   ++E          + +++ ++H E  +E   S+  
Sbjct: 1209 -QKSFETERDHLRGYIREIEATGLQTKEELK-------IAHIHLKEHQETIDELRRSVSE 1260

Query: 917  ESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLI-----GPETLVCHEVDLDDLDEKD 971
            ++ Q I     E+  +  +E + + L E+++ +P +       ET+   E+  +    KD
Sbjct: 1261 KTAQIINTQDLEKSHTKLQEEIPV-LHEEQELLPNVKEVSETQETMNELELLTEQSTTKD 1319

Query: 972  KTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDS 1031
             T++  + +E    N             Q +      LT  +D  +++K    + ++ D 
Sbjct: 1320 STTLARIEMERLRLNE----------KFQESQEEIKSLTKERDNLKTIKEA--LEVKHDQ 1367

Query: 1032 IAEESQEGLCE-RESANGFETNV----ASGTCSIIVQERES---REKGQKRPSDGNSGLM 1083
            + E  +E L + +ES +  E ++         + IV E E    ++    R      GL 
Sbjct: 1368 LKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLS 1427

Query: 1084 AKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLAR---- 1139
             + Q+   +  S A + +     Q     +   L  + K    KHL   +  K+A     
Sbjct: 1428 KRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLK 1487

Query: 1140 ------SPARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSTERISFLQEKL 1193
                  +  R++   K+ E    +++    + +      ++ E +   + ++IS +QEK+
Sbjct: 1488 EQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKV 1547

Query: 1194 QEIRKY 1199
             E++++
Sbjct: 1548 NELKQF 1553



 Score = 60.8 bits (146), Expect = 8e-09
 Identities = 170/886 (19%), Positives = 350/886 (39%), Gaps = 130/886 (14%)

Query: 414  EPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDS----------NSESEREEI- 462
            E K+KE+ + L+E  ++ L + +EM   + K    EN+ +          + E+ER E+ 
Sbjct: 1126 EEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELA 1185

Query: 463  --------ELKSPRGRRRIARDVNSIKKEIEEEK----------------TEDKLKDNDT 498
                    E+KS    R++ ++   ++K  E E+                T+++LK    
Sbjct: 1186 QKLNENYEEVKSITKERKVLKE---LQKSFETERDHLRGYIREIEATGLQTKEELKIAHI 1242

Query: 499  ENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEE-----EKSQERE 553
              K+  +  +   +  +E      NT   ++   K QE+     +E+E     ++  E +
Sbjct: 1243 HLKEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQ 1302

Query: 554  ETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYY 613
            ET ++ +   E+        L   +++      K Q+  E  IKS   +   +  +    
Sbjct: 1303 ETMNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQE-EIKSLTKERDNLKTIKE-- 1359

Query: 614  GWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKS 673
               V++D+    + I   L K   ++ Q K+ ++    EKD +  +   + ++ +P   +
Sbjct: 1360 ALEVKHDQ--LKEHIRETLAK--IQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSA 1415

Query: 674  TLSSNMP-YGLSK-TANSEGKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDK 731
             L   +   GLSK    S  +  S + + +    L++ L +E   LK+ ++  E +    
Sbjct: 1416 LLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIK--EIVAKHL 1473

Query: 732  LDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPK 791
              EE  K++   LKE + T    +  L++ + E E  +     ++E   +  +   +   
Sbjct: 1474 ETEEELKVAHCCLKEQEET----INELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIY 1529

Query: 792  GKGRRSKTKDLSLEIIKISSFGQ-NEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCV 850
             K  +   K +S    K++   Q  E          S+E   L+  N    +++EI   +
Sbjct: 1530 EKEEQFNIKQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMI 1589

Query: 851  KEKKLKRKILGQSSPEKKIRIENGMEMTNTV--SQERTSDCIGSEGM------------- 895
            KEK+  +++      E+    EN  E+   +  SQE+    +    +             
Sbjct: 1590 KEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHL 1649

Query: 896  ------KNLNFEQHFERENEGMPSLIAESNQCIQQLTSERFD-SPAEETVNIPLKEDEDA 948
                  + LN E + E EN  +  ++ E+ + ++ +T ER D    EET    LK + D 
Sbjct: 1650 KEQFETQKLNLE-NIETENIRLTQILHENLEEMRSVTKERDDLRSVEET----LKVERDQ 1704

Query: 949  MPLIGPETLVCHEVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASP 1008
            +     ET+        DL+++++  I  + ++  +          L  +V    +  S 
Sbjct: 1705 LKENLRETIT------RDLEKQEELKIVHMHLKEHQETI-----DKLRGIVSEKTNEISN 1753

Query: 1009 LTLSQDESRSVKSESDITIEVD-SIA----EESQEGLCERESANGFETNVASGTCSIIVQ 1063
            +    + S       D+ I+ +  IA    +E QE + +                 I+ +
Sbjct: 1754 MQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLR--------------GIVSE 1799

Query: 1064 ERESREKGQKRPSDGNSGLMAKKQK-RTPKRTSAAAKNEKNGTGQS-SDSEDL--PVLDN 1119
            + +     QK   + N+ L  K Q+ +  +      K + N T +  S+ E L   + D 
Sbjct: 1800 KTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQ 1859

Query: 1120 SSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDN 1179
            S   + ++  N++  QKL  +   +   +K+ +  +  E+         K S Q  +  +
Sbjct: 1860 SLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARD 1919

Query: 1180 MNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDREVS 1225
            +          E  QE++   M  K    T+D+ R+++ +K  ++S
Sbjct: 1920 L----------EIQQELKTARMLSKEHKETVDKLREKISEKTIQIS 1955


>gi|87299628 biorientation of chromosomes in cell division 1-like
            [Homo sapiens]
          Length = 3051

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 229/1141 (20%), Positives = 421/1141 (36%), Gaps = 204/1141 (17%)

Query: 150  VTEDEKEEESSEEEDEDKRRLN-------DELLGKVVSVVSATERTEWYPALVISPSCND 202
            VT D  EE     +DE+K + N       D   GK  SV  A     +  +   S S +D
Sbjct: 428  VTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSDS-DD 486

Query: 203  DITV---------KKDQCLVRSFIDSKFYSIARKDIKEV-----------DILNLPESEL 242
            ++TV         +K++ L+R  I+ +     RK   E              ++L ES  
Sbjct: 487  ELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESST 546

Query: 243  -STKPGLQKASIFLKTRVVPDNWKMDISEILESSSSD-DEDGPAEENDEEKEKEAKKTEE 300
             S +P   +    LK R V +  K+ +S+  +  S + +E+   ++  EE  KE  KT E
Sbjct: 547  KSLEPKAARIKEVLKERKVLEK-KVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSE 605

Query: 301  EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID 360
               +E++   +         K +  +  P +KP     + L++             +N +
Sbjct: 606  HCEKEKISSSKE-------LKHVHAKSEP-SKPARRLSESLHVVD-----------ENKN 646

Query: 361  SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEE 420
               + ++       P++         T   K      E C     + ++   +E  +K++
Sbjct: 647  ESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLKKD 706

Query: 421  KKD---LEESMEEALKLDQEMPLTEVKSEPEENIDSNSE-------SEREEIELKSPRGR 470
              +   L+  +++ +K  +E P  E K+  E+ +    +          +E EL S    
Sbjct: 707  DSETPHLKSLLKKEVKSSKEKPERE-KTPSEDKLSVKHKYKGDCMHKTGDETELHSSEKG 765

Query: 471  RRIARDVNSIKKEIE---EEKTEDKLKDNDTENKDV--DDDYETAE---------KKENE 516
             ++  ++    ++ +   ++KTE K K  +     V   D    +E         +KEN 
Sbjct: 766  LKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENN 825

Query: 517  LLLGRKNTPKQK-EKKIKKQEDSDKDSDEEEEKS-----QEREE--TESKCDSEGEEDEE 568
                R +  K K E K ++  DS    D    K      Q R E  +E KCD +    + 
Sbjct: 826  KKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDS 885

Query: 569  DMEPCLTGTKVKVKYGRGKTQKIYEAS--IKSTEIDDGEVLYLVHYYGWNVRYDEWVKAD 626
            +++P     +  V   + +T+ + E    +KS     G+ + +V                
Sbjct: 886  NLKP-----EEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQVKVVE--------------- 925

Query: 627  RIIWPLDKGGPK-----KKQKKKAKNKEDSEKDEK-RDEERQKSKRGRPPLKSTLSSNMP 680
                 L +G  K     K  K+K   + DSEK  K + E++   + G  P+  T SS+  
Sbjct: 926  ---TELQEGATKQATTPKPDKEKNTEENDSEKQRKSKVEDKPFEETGVEPVLETASSS-A 981

Query: 681  YGLSK---------TANSEGKSDSCSSDSETEDALEKNLINEEL--SLKDELEKNENLND 729
            +   K          A  + KSD  S+ +  E  L     +  L  S KD  +K+EN +D
Sbjct: 982  HSTQKDSSHRAKLPLAKEKYKSDKDSTSTRLERKLSDGHKSRSLKHSSKDIKKKDENKSD 1041

Query: 730  DKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEE-VKKEAEK 788
            DK  +E    S+H     + + M+  + L   + EN +       +M K EE +      
Sbjct: 1042 DKDGKEVD--SSHEKARGNSSLME--KKLSRRLCENRR--GSLSQEMAKGEEKLAANTLS 1095

Query: 789  SPKGKG--RRSKTKDLSLEIIKISSFGQNEAGSEPHIE----------------AHSLEL 830
            +P G    R  K+ D++L    I      E  SEP +E                   ++ 
Sbjct: 1096 TPSGSSLQRPKKSGDMTL----IPEQEPMEIDSEPGVENVFEVSKTQDNRNNNSQQDIDS 1151

Query: 831  SSLDNKNFSSATEDEIDQCVKEKKL-----------------KRKILGQSSPEKKIRIEN 873
             ++  K  ++  +DE+  C  + K                  ++    +S+  KK+ I++
Sbjct: 1152 ENMKQKTSATVQKDELRTCTADSKATAPAYKPGRGTGVNSNSEKHADHRSTLTKKMHIQS 1211

Query: 874  GMEMTNTVSQE-----RTSDCIGSEGMKN--LNFEQHFERENEGMPSLIAESNQCIQQLT 926
             +   N   +E      T   I SE +    L+     +R  + + +  AE +      T
Sbjct: 1212 AVSKMNPGEKEPIHRGTTEVNIDSETVHRMLLSAPSENDRVQKNLKNTAAEEHVAQGDAT 1271

Query: 927  SERF----DSPAEETVN-IPLKE--DEDAMPLIGPETLV------CHEVDLDDLDEKDKT 973
             E       SP+  +V  +PL+E  D D +PL    T++          D   L  +  T
Sbjct: 1272 LEHSTNLDSSPSLSSVTVVPLRESYDPDVIPLFDKRTVLEGSTASTSPADHSALPNQSLT 1331

Query: 974  SIEDVAVESSESNS-----LVSIPPALPPVVQHNFSVASPLTLSQDESRSV-----KSES 1023
              E   +++S+S        V  P       + +   A   TL   +   V        +
Sbjct: 1332 VRESEVLKTSDSKEGGEGFTVDTPAKASITSKRHIPEAHQATLLDGKQGKVIMPLGSKLT 1391

Query: 1024 DITIEVDSIAEE-SQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGL 1082
             + +E ++I +E     + ++E+    E N+   T    V+  +            N+  
Sbjct: 1392 GVIVENENITKEGGLVDMAKKENDLNAEPNLKQ-TIKATVENGKKDGIAVDHVVGLNTEK 1450

Query: 1083 MAKKQKRTPKRTSAAAKNEKNGTGQSSDSEDLPVLDNSSKCTPVKHLNVSKPQKLARSPA 1142
             A+  K   KR+    K+      + +++ ++     S     V H    + + +A  P 
Sbjct: 1451 YAETVKLKHKRSPGKVKDISIDVERRNENSEVDTSAGSGSAPSVLHQRNGQTEDVATGPR 1510

Query: 1143 R 1143
            R
Sbjct: 1511 R 1511



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 153/836 (18%), Positives = 324/836 (38%), Gaps = 69/836 (8%)

Query: 426  ESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIAR--DVNSIKKE 483
            ++ E A K     P T+  ++ E   +  ++ E+   +     G     +  + + +   
Sbjct: 228  KTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTAD-SGGEGLETAPKSEEFSDLPCP 286

Query: 484  IEEEKTEDKLKDN-DTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKDS 542
            +EE K   K  +N    NKDV  +    + K  +    + ++ ++ E+K +K+E ++K  
Sbjct: 287  VEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKF 346

Query: 543  DEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEID 602
            D  ++    ++  + K   E E +   +       K K   G  +     + S+  +++D
Sbjct: 347  DHSKKSEDTQKVKDEKQAKEKEVESLKLPSEKNSNKAKTVEGTKE-----DFSLIDSDVD 401

Query: 603  DGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQ 662
                + +   +  ++   E    + ++        +     + KNK++  K +  D    
Sbjct: 402  GLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEG 461

Query: 663  KSKRGR------PPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELS 716
            K+K  R      P L S   S+    L+     +      S   E E+ L +  IN E  
Sbjct: 462  KTKSVRHAYVHKPYLYSKYYSDSDDELTVEQRRQ------SIAKEKEERLLRRQINREKL 515

Query: 717  LKDELEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQIVQIFGNKM 776
             +   +K E     K   +    S+  L+E+    ++P      EV +  ++++    K+
Sbjct: 516  EEKRKQKAEKTKSSKTKGQGR--SSVDLEESSTKSLEPKAARIKEVLKERKVLE---KKV 570

Query: 777  EKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNE--AGSEPHIEAHSLELSSLD 834
              +++ KK++    +   ++ + ++ S E +K S   + E  + S+     H+    S  
Sbjct: 571  ALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKP 630

Query: 835  NKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQER---TSDCIG 891
             +  S +    +D+   E KL+R+   ++S    + +E   E T+T   +R    S+   
Sbjct: 631  ARRLSESLH-VVDENKNESKLEREHKRRTS--TPVIMEGVQEETDTRDVKRQVERSEICT 687

Query: 892  SEGMK---NLNFEQHFERENEGMPSL--IAESNQCIQQLTSERFDSPAEETVNIPLKEDE 946
             E  K    L  E+H ++++   P L  + +      +   ER  +P+E+ +++  K   
Sbjct: 688  EEPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPSEDKLSVKHKYKG 747

Query: 947  DAMPLIGPETLVCH-------EVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVV 999
            D M   G ET +         E ++    ++ K S +D     S+  +   +      V+
Sbjct: 748  DCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERKL-----SVL 802

Query: 1000 QHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEGLCERESANGFE-TNVASGTC 1058
              +    S   +  DE  +V+ E++      S  +   E    R S +  +  ++ S   
Sbjct: 803  GKDGKPVSEYIIKTDE--NVRKENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQH 860

Query: 1059 SIIVQERE---SREKGQKRPSDGNSGLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSE--D 1113
             I +Q R    S +K     ++ +S L  ++     KR + +   EK      S ++   
Sbjct: 861  GITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQ 920

Query: 1114 LPVLDNSSKCTPVKHLNVSKPQKLARSPARISPHIKDGEKDKHREKHPNSSP--RTYKWS 1171
            + V++   +    K     KP K          + ++ + +K R+      P   T    
Sbjct: 921  VKVVETELQEGATKQATTPKPDK--------EKNTEENDSEKQRKSKVEDKPFEETGVEP 972

Query: 1172 FQLNELDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDREVSHA 1227
                   + +ST++ S  + KL   ++ Y S K   +T   R+     K R + H+
Sbjct: 973  VLETASSSAHSTQKDSSHRAKLPLAKEKYKSDKDSTSTRLERKLSDGHKSRSLKHS 1028



 Score = 47.4 bits (111), Expect = 9e-05
 Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 28/272 (10%)

Query: 417  VKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARD 476
            V+ + K++EE      K  ++      + EP++N D   +S  E  + + P       ++
Sbjct: 2754 VEADPKEVEEEERHMPKRKRKQHYLSSEDEPDDNPDV-LDSRIETAQRQCPETEPHDTKE 2812

Query: 477  VNSIKKEIEE-EKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQ 535
             NS  +++EE  KT  +     +   +  D+Y ++E        G K  P+Q +    K 
Sbjct: 2813 ENS--RDLEELPKTSSETNSTTSRVMEEKDEYSSSETT------GEK--PEQNDDDTIKS 2862

Query: 536  EDSDKDSDEEEEKSQERE---ET--ESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQK 590
            ++ D+    + ++ + R+   ET  + K DS+ +     +E   + +K+KV       ++
Sbjct: 2863 QEEDQPIIIKRKRGRPRKYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQTDESNKE 2922

Query: 591  IYEASIKSTEIDDGE--VLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKA--- 645
                  +S   DDGE  ++  V   G   +    V  D      +   P++K++K     
Sbjct: 2923 TANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDA-----ESSEPERKRQKSVSDP 2977

Query: 646  -KNKEDSEKDEKRDEERQKSKRGRPPLKSTLS 676
             ++K++ E DE+ +EE +    G     +T S
Sbjct: 2978 VEDKKEQESDEEEEEEEEDEPSGATTRSTTRS 3009



 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 80/398 (20%), Positives = 157/398 (39%), Gaps = 44/398 (11%)

Query: 224  IARKDIKEVDILNLPESELSTKPG----LQKASIFLKTRVVPDNWKMDISEILESSSSDD 279
            +  ++ K  +IL  PES    KP     LQ+  + +   +  +N     +E + S S + 
Sbjct: 2676 VPSEEEKNGEILAPPESLCGGKPSGIAELQREPLLVNESLNVENSGFRTNEEIHSESYNK 2735

Query: 280  EDGPAEENDEEKEKEAKKTE---EEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVL 336
             +  +   D  +       E   +EV EEE    +R    +Q Y   ED   P + P VL
Sbjct: 2736 GEISSGRKDNAEAISGHSVEADPKEVEEEERHMPKRKR--KQHYLSSEDE--PDDNPDVL 2791

Query: 337  GYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGF 396
                       R+   Q  C   +     ++   DL   +  +++  N  T+  + +   
Sbjct: 2792 DS---------RIETAQRQCPETEPHDTKEENSRDLE-ELPKTSSETNSTTS--RVMEEK 2839

Query: 397  EEYCRSANIQFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPL-TEVKSEPEENIDSNS 455
            +EY  S     +   + +  +K +++D    ++      ++ P+ T +K + +   D+  
Sbjct: 2840 DEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRGRPRKYPVETTLKMKDDSKTDTGI 2899

Query: 456  ESEREEIELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKEN 515
             +  +     SP   +      +   KE    + E  + ++D E K V        K + 
Sbjct: 2900 VTVEQ-----SPSSSKLKVMQTDESNKETANLQ-ERSISNDDGEEKIVTSVRRRGRKPKR 2953

Query: 516  ELLLG---RKNTPKQKEKKI-------KKQEDSDKDSDEEEEKSQEREETESKCDSEGEE 565
             L +      + P++K +K        KK+++SD++ +EEEE       T S   SE + 
Sbjct: 2954 SLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTRSTTRSEAQR 3013

Query: 566  DEEDMEPCLTGTKVKVKYG---RGKTQKIYEASIKSTE 600
             +  + P +   +     G   RG+ Q++ EA +K  +
Sbjct: 3014 SKTQLSPSIKRKREVSPPGARTRGQ-QRVEEAPVKKAK 3050



 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 12/216 (5%)

Query: 97   DERTLRRTSLCLKGERHFAESET---LDQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTED 153
            D R       C + E H  + E    L++LP T+ E   T      T+R        +  
Sbjct: 2792 DSRIETAQRQCPETEPHDTKEENSRDLEELPKTSSETNST------TSRVMEEKDEYSSS 2845

Query: 154  EKEEESSEEEDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKDQCLV 213
            E   E  E+ D+D  +  +E   + + +     R   YP +  +    DD         V
Sbjct: 2846 ETTGEKPEQNDDDTIKSQEE--DQPIIIKRKRGRPRKYP-VETTLKMKDDSKTDTGIVTV 2902

Query: 214  RSFIDSKFYSIARKDIKEVDILNLPESELSTKPGLQKASIFLKTRVVPDNWKMDISEILE 273
                 S    + + D    +  NL E  +S   G +K    ++ R       + +S+  E
Sbjct: 2903 EQSPSSSKLKVMQTDESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDAE 2962

Query: 274  SSSSDDEDGPAEENDEEKEKEAKKTEEEVPEEELDP 309
            SS  + +   +  +  E +KE +  EEE  EEE +P
Sbjct: 2963 SSEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDEP 2998


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 136/689 (19%), Positives = 250/689 (36%), Gaps = 134/689 (19%)

Query: 441  TEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTEN 500
            T +K + EE I    +SE+E +                     +EE+  E ++ +  TE 
Sbjct: 434  THIKVKSEEKIKVVEKSEKETVI--------------------VEEQTEETQVTEEVTEE 473

Query: 501  KDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCD 560
            ++ +   E  +++E     G +   +  E++ K     +  S E+E KS  +EE +S  +
Sbjct: 474  EEKEAKEEEGKEEEG----GEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAE 529

Query: 561  SEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYD 620
            ++  E EE   P    +  K K    K +       KS E ++ +               
Sbjct: 530  AKSPEKEEAKSPAEVKSPEKAK-SPAKEEAKSPPEAKSPEKEEAKS-------------- 574

Query: 621  EWVKADRIIWPLDKGGPKKKQ---KKKAKNKEDSEKDEKR----DEERQKSKRGRPPLKS 673
                      P +   P+K +   K++AK+  +++  EK      EE +     + P+K 
Sbjct: 575  ----------PAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKE 624

Query: 674  TLSS----NMPYGLSKTANSEGKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLND 729
               S      P         E KS   +   E E+A  K+    +  +K E +  E    
Sbjct: 625  EAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEA--KSPEKAKSPVKAEAKSPEKAKS 682

Query: 730  D-KLDEENPKISAHILKENDRTQMQPLETLKLEVGENEQI---VQIFGNKMEKTEEVKKE 785
              K + ++P+ +   +KE  ++  +    +K E    E+    V+      EK +   KE
Sbjct: 683  PVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE 742

Query: 786  AEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDE 845
              KSP+      K K L ++  +  +  + EA S                  F    +  
Sbjct: 743  EAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPA--------------DKFPEKAKSP 788

Query: 846  IDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFE 905
            + + VK  +  +  L + +   +  I    E+ + V +E                E+  E
Sbjct: 789  VKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEE----------------EKPQE 832

Query: 906  RENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLD 965
             + +  P    E        T E+ DS  EE    P KE         P+  V  E   +
Sbjct: 833  VKVKEPPKKAEEEKAPATPKTEEKKDSKKEEA---PKKE--------APKPKV--EEKKE 879

Query: 966  DLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDI 1025
               EK K S  +   E +E    V  P    P        A P    ++++   K E D 
Sbjct: 880  PAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKP----KEKTEVAKKEPD- 934

Query: 1026 TIEVDSIAEESQEGLCERESANGFETNVASGTCSIIVQERESREKGQKRPSD-GNSGLMA 1084
                D+ A+E  +   ++E+A                ++++++E+  K+P +   +   A
Sbjct: 935  ----DAKAKEPSKPAEKKEAA---------------PEKKDTKEEKAKKPEEKPKTEAKA 975

Query: 1085 KKQKRTPKRTSAAAKNEKNGTGQSSDSED 1113
            K+  +T  +  +  K EK     S+D +D
Sbjct: 976  KEDDKTLSKEPSKPKAEKAEKSSSTDQKD 1004



 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 119/629 (18%), Positives = 245/629 (38%), Gaps = 63/629 (10%)

Query: 376  ILNSAASYNVK-TAYRKYLYGFEEYCRSANIQFRTVH----------HHEPKVKEEKKDL 424
            +LN   + +++  AYRK L G E       I F              H + K +E+ K +
Sbjct: 388  LLNVKMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVV 447

Query: 425  EESMEEALKLDQEMPLTEVKSE--------------PEENIDSNSESEREEIELKSPRGR 470
            E+S +E + ++++   T+V  E               EE      E+E  E E KSP   
Sbjct: 448  EKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAE 507

Query: 471  RRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEK 530
               + +  +     EE K+  + K  + E      + ++ EK ++      K+ P+ K  
Sbjct: 508  EAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSP 567

Query: 531  KIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEE------DEEDMEPCLTGTKVKVKYG 584
            + ++ +   +    E+ KS  +EE +S  +++  E       EE   P    + VK +  
Sbjct: 568  EKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAK 627

Query: 585  RGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKA---------DRIIWPLDKG 635
                 K  E +   T+ +               +  E  K+         ++   P+ K 
Sbjct: 628  SPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV-KA 686

Query: 636  GPKKKQKKKAKNKEDSEKDEKR----DEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEG 691
              K  +K K+  KE+++  EK      EE +  ++ + P+K    +  P         E 
Sbjct: 687  EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE--EAKTPEKAKSPVKEEA 744

Query: 692  KSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKL------DEENPKISAHILK 745
            KS   +   E    L+      +   K+E     +   +K       + ++P+ +   LK
Sbjct: 745  KSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLK 804

Query: 746  ENDRT---QMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDL 802
            E+ +    ++   E +K  V E E+  ++   +  K  E +K A  +PK + ++   K+ 
Sbjct: 805  EDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEK-APATPKTEEKKDSKKEE 863

Query: 803  SLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQ 862
            + +  K +   + E   EP +E    + S ++ K   +  + ++    KE   K ++   
Sbjct: 864  APK--KEAPKPKVEEKKEPAVE--KPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKED 919

Query: 863  SSPEKKIRIENGMEMTNTVSQERTSDCIGSEGM-KNLNFEQHFERENEGMPSLIAESNQC 921
            + P++K  +    E  +  ++E +      E   +  + ++   ++ E  P   A++ + 
Sbjct: 920  AKPKEKTEVAK-KEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKED 978

Query: 922  IQQLTSERFDSPAEETVNIPLKEDEDAMP 950
             + L+ E     AE+       + +D+ P
Sbjct: 979  DKTLSKEPSKPKAEKAEKSSSTDQKDSKP 1007



 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 121/667 (18%), Positives = 252/667 (37%), Gaps = 80/667 (11%)

Query: 7    PAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPLRVGAIV 66
            P   +V T +  K      E KIK V++  K  V++++      V ++  +   +     
Sbjct: 427  PKIPSVSTHIKVK-----SEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEE 481

Query: 67   ETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETLDQLPLT 126
            E +  +G  +E   ++  +    +   ++         S   +  +  AE+++ ++    
Sbjct: 482  EGKEEEGGEEEE--AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAK 539

Query: 127  NPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEES---SEEEDEDKRRLNDELLGKVVSVVS 183
            +P    +P  AK   +    S P  +  ++EE+   +E +  +K +   +   K  +   
Sbjct: 540  SPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK 599

Query: 184  ATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDS--KFYSIARKDIKEVDILNLPESE 241
            + E+ +  P    + S  +  +  K++    + + S  K  S  +++ K  +    PE E
Sbjct: 600  SPEKAK-SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKE 658

Query: 242  LSTKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKEAKKTEEE 301
             +  P   K+ +  + +  P+  K  +    E+ S +    P +E    + K  +K +  
Sbjct: 659  EAKSPEKAKSPVKAEAKS-PEKAKSPVKA--EAKSPEKAKSPVKE----EAKSPEKAKSP 711

Query: 302  VPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDS 361
            V EE   PE+  + +++  K  E   +P+ +      K                     +
Sbjct: 712  VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEK---------------------A 750

Query: 362  GAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEEK 421
             +  K   +D+  P   + A    ++   K    F E  +S              VKEE 
Sbjct: 751  KSPEKAKTLDVKSPEAKTPAKEEARSPADK----FPEKAKSP-------------VKEEV 793

Query: 422  KDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSIK 481
            K  E++ +  LK D + P  E+  + E       E + +E+++K P  +    +   + K
Sbjct: 794  KSPEKA-KSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPK 852

Query: 482  KEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQEDSDKD 541
             E +++  +++    +     V++  E A +K  E  +  K    + +KK+   E     
Sbjct: 853  TEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPA 912

Query: 542  SDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEI 601
              E +E ++ +E+TE     +  +D +  EP     K +    +  T++  E + K  E 
Sbjct: 913  KVEVKEDAKPKEKTE--VAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKE--EKAKKPEEK 968

Query: 602  DDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDEER 661
               E                  KA      L K   K K +K  K+    +KD K  E+ 
Sbjct: 969  PKTE-----------------AKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKA 1011

Query: 662  QKSKRGR 668
             + K  +
Sbjct: 1012 TEDKAAK 1018



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 101/477 (21%), Positives = 177/477 (37%), Gaps = 57/477 (11%)

Query: 416  KVKEEKKDLEESMEEALKLDQEMPLT--EVKSEPEENIDSNSESEREEIELKSPRGRR-- 471
            K K   K+  +S  EA   ++E   +  EVKS PE+      E  +   E KSP   +  
Sbjct: 549  KAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKS-PEKAKSPAKEEAKSPAEAKSPEKAKSP 607

Query: 472  --RIARDVNSIKKEIEEE-------KTEDKLKDNDTENKDVDDDYETAEKKENELLLGRK 522
                A+     K  ++EE       K+ +K K    E     +  ++ EK+E +     K
Sbjct: 608  VKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAK 667

Query: 523  NTPKQKEKKIKKQEDSDK--DSDEEEEKSQEREETES--KCDSEGEEDEEDMEPCLTGTK 578
            +  K + K  +K +   K      E+ KS  +EE +S  K  S  +E+ +  E   +  K
Sbjct: 668  SPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVK 727

Query: 579  VKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPK 638
             + K        + E +    +    E    +       +     +A     P DK   K
Sbjct: 728  EEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARS---PADKFPEK 784

Query: 639  KK----------QKKKAKNKEDSEKDEK------------RDEERQKSKRGRPPLKSTLS 676
             K          +K K+  KED++  EK            ++EE+ +  + + P K    
Sbjct: 785  AKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE 844

Query: 677  SNMPYGLSKTANSEGKSDSCSSDSETEDALEKNL-------INEELSLKDELEKNENLND 729
               P     T  +E K DS   ++  ++A +  +       + +    K E +K E  + 
Sbjct: 845  EKAP----ATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDK 900

Query: 730  DKLDEENPKISAHILKENDRTQMQPLETLKLEVGE-NEQIVQIFGNKMEKTEEVKKEAEK 788
             K+     +  A +  + D    +  E  K E  +   +       K E   E K   E+
Sbjct: 901  KKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEE 960

Query: 789  SPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDE 845
              K    + KT+  + E  K  S   ++  +E   ++ S +    D+K    ATED+
Sbjct: 961  KAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTD--QKDSKPPEKATEDK 1015


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 109/589 (18%), Positives = 235/589 (39%), Gaps = 86/589 (14%)

Query: 399 YCRSANIQFRTVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEE-------NI 451
           Y R+ + +         + ++E+   ++  E   ++  ++ +    S P+E       N 
Sbjct: 27  YQRNDDDEEEAARERRRRARQERLRQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNT 86

Query: 452 DSNSESEREEIELKSPRGRRRIARDVNSIK--KEIEEEKTEDKLKDNDTENKDVDDDYET 509
               + E   +E  + R  RR  R   +++  KE +   T+  L       ++   + ET
Sbjct: 87  QVEGDDEAAFLERLARREERRQKRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENET 146

Query: 510 AEKKENELLLGRKNTPKQKEKKIKKQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEED 569
            EK+E       K+  +Q+  +I++ E   K   + + +  E  + E K + E EE+E+ 
Sbjct: 147 TEKEE-------KSESRQERYEIEETETVTKSYQKNDWRDAEENKKEDK-EKEEEEEEKP 198

Query: 570 MEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRII 629
               +   +V+V      T+   E  + S  + +G++                       
Sbjct: 199 KRGSIGENQVEVMVEEKTTESQEETVVMS--LKNGQI----------------------- 233

Query: 630 WPLDKGGPKKKQKKKAKNKEDS--EKDEKRDEERQKSKRGR--PPLKSTLSSNMPYGLS- 684
                  PK++++++  + E S  EK E+ D+ER +++R R     +  + +     ++ 
Sbjct: 234 ---SSEEPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIAD 290

Query: 685 KTANSEGKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHIL 744
           + A  E +  + + + E  +A E+  + EE     E  +     + +  EE  +I     
Sbjct: 291 ERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRI----- 345

Query: 745 KENDRTQMQPLETLKLEV-----------GENEQIVQIFGNKMEKTEEVKKEAEKSPKGK 793
           KE ++   +  + +K E             E E+  ++   K  K  E KK A +  K K
Sbjct: 346 KEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQLEEKKHAMQETKIK 405

Query: 794 GRRSKTK-------DLSLEIIKISSFGQNEAGSEPHIEAHSLELSSLDNKNFSSATEDEI 846
           G + + K       +   +  K+ +    + G E   +  +      ++K      E + 
Sbjct: 406 GEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFKKEEIKD 465

Query: 847 DQCVKEKKLKRKILGQSSPEK---KIRIENGMEMTNTVSQ-ERTSDCIGSEGMKNLNFEQ 902
           ++  K+K+ K ++      +K   +++ +NG  MT+ +   E T    G     +     
Sbjct: 466 EKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVD----- 520

Query: 903 HFERENEGMPSLIAESNQCIQQLTSERFDSPAEETVNIPLKEDEDAMPL 951
              +E EG P +  E+ + +++L   R ++ +EE   +  K+ E A+ L
Sbjct: 521 --TKEAEGAPQV--EAGKRLEELRRRRGETESEEFEKLKQKQQEAALEL 565



 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 85/470 (18%), Positives = 178/470 (37%), Gaps = 86/470 (18%)

Query: 409 TVHHHEPKVKEEKKDLEESMEEAL------KLDQEMPLTEVKSEPEENIDSNSESEREEI 462
           ++  ++ +V  E+K  E   E  +      ++  E P  E + E   +  S+ E   EE 
Sbjct: 202 SIGENQVEVMVEEKTTESQEETVVMSLKNGQISSEEPKQEEEREQGSDEISHHEKMEEED 261

Query: 463 ELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRK 522
           + ++   R R+  +     K  +++K  D+    + E K    + E  E +E E +   +
Sbjct: 262 KERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEERERMREEE 321

Query: 523 NTPKQKEKKIKKQE-----DSDKDSDEE----EEKSQEREETESKCDSEGEEDEEDMEPC 573
               ++ ++IK++E     +  +  +EE    EE+ + +EE +   +       E+ E  
Sbjct: 322 KRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKA 381

Query: 574 LTGTKVKVKYGRGKTQKIYEASIKSTEID---DGEVLYLVHYYGWNVRYDEWVKADRIIW 630
               + + K    K   + E  IK  +++   +G+                        W
Sbjct: 382 KVEEQKRNKQLEEKKHAMQETKIKGEKVEQKIEGK------------------------W 417

Query: 631 PLDKGGPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSE 690
             +K   + K +     K+  EK  K   +R+K +  +P  K                 E
Sbjct: 418 VNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFK---------------KEE 462

Query: 691 GKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRT 750
            K +    D E ++            +K  +++ +   + K   +N +   H LK  + T
Sbjct: 463 IKDEKIKKDKEPKE-----------EVKSFMDRKKGFTEVK--SQNGEFMTHKLKHTENT 509

Query: 751 QMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKIS 810
             +P     ++  E E   Q+   K  + EE+++          RR +T+    E +K  
Sbjct: 510 FSRPGGRASVDTKEAEGAPQVEAGK--RLEELRR----------RRGETESEEFEKLKQK 557

Query: 811 SFGQNEAGSE-PHIEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKI 859
              Q EA  E   ++    E   +  +      ++E D+ ++E++ KR++
Sbjct: 558 ---QQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRL 604



 Score = 53.9 bits (128), Expect = 9e-07
 Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 15/196 (7%)

Query: 409 TVHHHEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPR 468
           T    E K ++ KKD E   E    +D++   TEVKS+  E +    + +  E     P 
Sbjct: 457 TFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVKSQNGEFM--THKLKHTENTFSRPG 514

Query: 469 GRRRIARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQK 528
           GR  +         ++E  K  ++L+    E +   +++E  ++K+ E  L  +   K++
Sbjct: 515 GRASVDTKEAEGAPQVEAGKRLEELRRRRGETES--EEFEKLKQKQQEAALELEELKKKR 572

Query: 529 EKKIK---------KQEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKV 579
           E++ K         KQE++D+   EEEEK + +EE E +     E+ ++  E  L+  K 
Sbjct: 573 EERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKK 632

Query: 580 KVK--YGRGKTQKIYE 593
             K    +G + KI E
Sbjct: 633 PFKCFTPKGSSLKIEE 648



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 80/431 (18%), Positives = 172/431 (39%), Gaps = 58/431 (13%)

Query: 481 KKEIEEEKTED-KLKDNDTENKDVDDDYETAEKKENELLLGRKNTPKQKEKKIKKQED-- 537
           ++E+  +K E+ +L+      +  DDD E A ++        +   KQ+E+ + +  D  
Sbjct: 7   RRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLGQVTDQV 66

Query: 538 -------------------SDKDSDEEE---EKSQEREETESKCDSEGEEDEEDMEPCLT 575
                              +  + D+E    E+   REE   K   E  E +++ +P +T
Sbjct: 67  EVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLARREERRQKRLQEALERQKEFDPTIT 126

Query: 576 GTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKG 635
              + +   R +       + +  E  +              RY E  + + +     K 
Sbjct: 127 DASLSLPSRRMQNDTAENETTEKEEKSESR----------QERY-EIEETETVTKSYQKN 175

Query: 636 GPKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDS 695
             +  ++ K   KED EK+E+ +E+ ++   G   ++  +         +T     K+  
Sbjct: 176 DWRDAEENK---KEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQEETVVMSLKNGQ 232

Query: 696 CSSDSETEDALEKNLINEELSLKDELEKNENLNDD----KLD-EENPKISAH----ILKE 746
            SS+ E +   E+   ++E+S  +++E+ +    +    +L+ EE  +I A     I  E
Sbjct: 233 ISSE-EPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADE 291

Query: 747 NDRTQMQ----PLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGR-RSKTKD 801
             R + +      E  + E  E E++ +      E+ + +K+E +++ + + R + + K 
Sbjct: 292 RARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKR 351

Query: 802 LSLEIIKISSFGQNEAGSEPHIEAHSLELSSLD----NKNFSSATEDEIDQCVKEKKLKR 857
            + E  +I    +  A       A   E + ++    NK          +  +K +K+++
Sbjct: 352 AAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQLEEKKHAMQETKIKGEKVEQ 411

Query: 858 KILGQSSPEKK 868
           KI G+   EKK
Sbjct: 412 KIEGKWVNEKK 422



 Score = 31.2 bits (69), Expect = 6.5
 Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 100 TLRRTSLCLKGER---HFAESETLD--QLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDE 154
           T+   SL L   R     AE+ET +  +   +  E +        T   +++     E+ 
Sbjct: 124 TITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYEIEETETVTKSYQKNDWRDAEEN 183

Query: 155 KEEESSEEEDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKDQCLVR 214
           K+E+  +EE+E+++     +    V V+   + TE     V+    N  I+ ++ +    
Sbjct: 184 KKEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQEETVVMSLKNGQISSEEPK--QE 241

Query: 215 SFIDSKFYSIARKDIKEVDILNLPESELSTKPGLQKASIFLK--TRVVPDNWKMDISEIL 272
              +     I+  +  E +     E+E +     ++  I  +   ++  +  +++  E  
Sbjct: 242 EEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKA 301

Query: 273 ESSSSDDEDGPAEENDEEKEKEAKKTEEEVPEEE-LDPEERDNFLQQLYKFMEDR 326
            +   +  +    E   E+EK A +  + + EEE    EER    ++  +  E+R
Sbjct: 302 AAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEER 356


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
            sapiens]
          Length = 1220

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 136/655 (20%), Positives = 252/655 (38%), Gaps = 98/655 (14%)

Query: 490  EDKLKDNDTENKDVDDDYETAE------KKENELLLGRKNTPKQKEKKIKKQEDSDKDSD 543
            + K K  D+   D+D D   AE       KE E    +K+  K+K++K K+  D D    
Sbjct: 4    KQKNKSEDSTKDDIDLDALAAEIEGAGAAKEQE---PQKSKGKKKKEKKKQDFDEDDILK 60

Query: 544  EEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDD 603
            E EE S E +  ++  ++   +  E+ E   T    K K  +GK Q   +   +  E  D
Sbjct: 61   ELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKD 120

Query: 604  GE----VLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDSEKDEKRDE 659
             +        V  Y  +   D++ K      P    G  +K  KK    E+ E + K+ +
Sbjct: 121  SKSKKTAKPKVEMYSGSDDDDDFNKL-----PKKAKGKAQKSNKKWDGSEEDEDNSKKIK 175

Query: 660  ER-----------------QKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSDSCSSDSET 702
            ER                 Q  K  +   K+    N+  G ++  ++  K  + +     
Sbjct: 176  ERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESG-NEDDDASFKIKTVAQKKAE 234

Query: 703  EDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRTQMQPLETLKLEV 762
            +   E+   +EE +   +L++ E L   K D+   K S    +E         ET+K +V
Sbjct: 235  KKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEE---------ETVKSKV 285

Query: 763  GENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLEIIKISSFGQNEAGSEPH 822
              +  ++     K E     + + E   K K ++ K K    E  K    G ++A     
Sbjct: 286  TVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKK-KGEKEEKEKEKKKGPSKA----T 340

Query: 823  IEAHSLELSSLDNKNFSSATEDEIDQCVKEKKLKRKILGQSSPEKKIRIENGMEMTNTVS 882
            ++A    L+ L         E+E  +  +E+++KR    ++  +++ R+E          
Sbjct: 341  VKAMQEALAKLKE-------EEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQK 393

Query: 883  QERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESNQCIQQLTSERFDSPAEETV--NI 940
            ++   + +  EG K L   Q   R         A +   ++ L ++  + P+++++    
Sbjct: 394  EKERKERLKKEG-KLLTKSQREAR---------ARAEATLKLLQAQGVEVPSKDSLPKKR 443

Query: 941  PLKEDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIEDVAVESSESNSLVSIPPALPPVVQ 1000
            P+ ED+    +  P+ L   EV  + ++      + +  V   E       PP + P  +
Sbjct: 444  PIYEDKKRKKI--PQQLESKEVS-ESMELCAAVEVMEQGVPEKEET-----PPPVEPEEE 495

Query: 1001 HNFSVASP---LTLSQDESRSVKSESDITIEVDSIAEESQEGLCERESANGFETNVASGT 1057
             +   A       ++ DE       + + IEV    EE +E   E E     E+      
Sbjct: 496  EDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEE--EEEEEEDEES------ 547

Query: 1058 CSIIVQERESREKGQKRPSDGNSGLMAKKQKRTPKRTSAAAKNEKNGTGQSSDSE 1112
                  E E  E+G+   S+G+     + +K + ++ S    ++K     SSDSE
Sbjct: 548  ------EEEEEEEGESEGSEGDE----EDEKVSDEKDSGKTLDKKPSKEMSSDSE 592



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 23/342 (6%)

Query: 403 ANIQFRTVHHHEPKVKE-EKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREE 461
           A+ + +TV   + + KE E+K  +E   +  KL ++  L   K +  +  +S  + E E 
Sbjct: 221 ASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEET 280

Query: 462 IELKSPRGRRRIARDVNSIKKEIEEEKTEDKLKDN---DTENKDVDDDYETAEKKENELL 518
           ++ K       +  D   I    E+ +T    +D+   D + KD        E+KE E  
Sbjct: 281 VKSK-------VTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKK 333

Query: 519 LG-RKNTPKQKEKKIKK-QEDSDKDSDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTG 576
            G  K T K  ++ + K +E+ ++   EEEE+ +  EE E+K   E   ++E  E     
Sbjct: 334 KGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQK 393

Query: 577 TKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGG 636
            K + K    K  K+   S +         L L+   G  V   + +   R   P+ +  
Sbjct: 394 EKER-KERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKR---PIYEDK 449

Query: 637 PKKKQKKKAKNKEDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYGLSKTANSEGKSD-- 694
            +KK  ++ ++KE SE  E      +  ++G P  + T     P     T ++ G  D  
Sbjct: 450 KRKKIPQQLESKEVSESME-LCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDA-GLDDWE 507

Query: 695 SCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEEN 736
           + +SD ETE  +E N ++ E+    E E+ E   +++ DEE+
Sbjct: 508 AMASDEETE-KVEGNKVHIEVKENPE-EEEEEEEEEEEDEES 547



 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 160/744 (21%), Positives = 276/744 (37%), Gaps = 165/744 (22%)

Query: 95  DGDERTLRRTSLCLKGERHFAESETLDQLPL-TNPEHFGTPVIAKKTNRGRRSSLPVTED 153
           D D+       L L+ +   A+ ET+   P   N E F +    KK  +G++ S     D
Sbjct: 54  DEDDILKELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSF----D 109

Query: 154 EKEEESSEEEDEDKRRLNDELLGKVVSVVSATERTEWYPALVISPSCNDDITVK------ 207
           + + E  E++D   ++             +A  + E Y     S S +DD   K      
Sbjct: 110 DNDSEELEDKDSKSKK-------------TAKPKVEMY-----SGSDDDDDFNKLPKKAK 151

Query: 208 -KDQCLVRSFIDSKFYSIARKDIKEVDILNLPESELSTKPGLQKASIFLKTRV-VPDNWK 265
            K Q   + +  S+      K IKE   +N      S+     ++  FL++R     N K
Sbjct: 152 GKAQKSNKKWDGSEEDEDNSKKIKERSRIN------SSGESGDESDEFLQSRKGQKKNQK 205

Query: 266 MDISEILESSSSDDEDG-----PAEENDEEKEKEAKKTEEE-------VPEEELDPEERD 313
                 +ES + DD+        A++  E+KE+E KK +EE         +EEL+  ++D
Sbjct: 206 NKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKD 265

Query: 314 NFLQQ--LYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMD 371
              Q+    KF E+                                      V  ++ +D
Sbjct: 266 QSKQKESQRKFEEE-------------------------------------TVKSKVTVD 288

Query: 372 LGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHHHEPKVKEEKKDLEESMEEA 431
            G+ I  S       TA      G ++       +       + K K   K   ++M+EA
Sbjct: 289 TGV-IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEA 347

Query: 432 L-KLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRRIARDVNSIKKEIEEEKTE 490
           L KL +E      K E EE I        EE+E K  +   R+ ++    KK+ E+E+ E
Sbjct: 348 LAKLKEEE--ERQKREEEERI-----KRLEELEAKR-KEEERLEQEKRERKKQKEKERKE 399

Query: 491 DKLKDNDTENKDVDDDYETAE------KKENELLLGRKNTPK-------QKEKKIKKQED 537
              K+     K   +    AE      + +   +  + + PK       +K KKI +Q +
Sbjct: 400 RLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLE 459

Query: 538 SDKDSDE---------EEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKT 588
           S + S+           E+   E+EET    + E EED ED                G  
Sbjct: 460 SKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTED---------------AGLD 504

Query: 589 QKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNK 648
                AS + TE  +G  +++                        K  P+++++++ + +
Sbjct: 505 DWEAMASDEETEKVEGNKVHIE----------------------VKENPEEEEEEEEEEE 542

Query: 649 EDSEKDEKRDEERQKSKRGRPPLKSTLSSNMPYG--LSKTANSEGKSDS--CSSDSETED 704
           ED E +E+ +EE +            +S     G  L K  + E  SDS   S D  T++
Sbjct: 543 EDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKE 602

Query: 705 ALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILKENDRTQ-MQPLETLKLEVG 763
               +     +  K  LE ++N+N +KL      +  H+  +  +T+ +  L    ++ G
Sbjct: 603 ERAYDKAKRRIE-KRRLEHSKNVNTEKLRAPIICVLGHV--DTGKTKILDKLRHTHVQDG 659

Query: 764 ENEQIVQIFGNKMEKTEEVKKEAE 787
           E   I Q  G      E + ++ +
Sbjct: 660 EAGGITQQIGATNVPLEAINEQTK 683



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 100/507 (19%), Positives = 187/507 (36%), Gaps = 79/507 (15%)

Query: 636  GPKKKQKKKAKNKEDSEKDE----------KRDEERQKSKRGRPPLKSTLSSNMPYGLSK 685
            G K+K K +   K+D + D            +++E QKSK  +   K     +    L +
Sbjct: 2    GKKQKNKSEDSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKE 61

Query: 686  TANSEGKSDSCSSDSETEDALEKNLINEELSLKDELEKNENLNDDKLDEENPKISAHILK 745
                  ++    +D ET          EE + KD+ +K +       D+ +    +  L+
Sbjct: 62   LEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDND----SEELE 117

Query: 746  ENDRTQMQPLETLKLEVGENEQIVQIFGNKMEKTEEVKKEAEKSPKGKGRRSKTKDLSLE 805
            + D    +  +  K+E+         F NK+ K  + K +A+KS K      + +D S +
Sbjct: 118  DKDSKSKKTAKP-KVEMYSGSDDDDDF-NKLPK--KAKGKAQKSNKKWDGSEEDEDNSKK 173

Query: 806  I---IKISSFGQNEAGSEPHIEAHSLELSSLDNK---NFSSATEDEIDQCVKEKKLKRKI 859
            I    +I+S G++   S+  +++   +  +  NK   N  S  ED+      +   K K 
Sbjct: 174  IKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDD------DASFKIKT 227

Query: 860  LGQSSPEKKIRIENGMEMTNTVSQERTSDCIGSEGMKNLNFEQHFERENEGMPSLIAESN 919
            + Q   EKK R             ER         ++ L  ++  E           + +
Sbjct: 228  VAQKKAEKKER-------------ERKKRDEEKAKLRKLKEKEELET---------GKKD 265

Query: 920  QCIQQLTSERFDSPAEETVNIPLKEDEDAMPLIGPETLVCHEVDLDDLDEKDKTSIEDVA 979
            Q  Q+ +  +F+   EETV   +  D   +P    +       + D+  +K K   +   
Sbjct: 266  QSKQKESQRKFE---EETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKK 322

Query: 980  VESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSVKSESDITIEVDSIAEESQEG 1039
             E  E        P+   V     ++A    L ++E R  + E           EE  + 
Sbjct: 323  GEKEEKEKEKKKGPSKATVKAMQEALAK---LKEEEERQKREE-----------EERIKR 368

Query: 1040 LCERESANGFETNVASGTCSIIVQERESREKGQKRPSDGNSGLMAKKQKRTPKRTSAAAK 1099
            L E E+    E  +          E+E RE+ +++  +    L  + +  T  +  A A+
Sbjct: 369  LEELEAKRKEEERL----------EQEKRERKKQKEKERKERLKKEGKLLTKSQREARAR 418

Query: 1100 NEKNGTGQSSDSEDLPVLDNSSKCTPV 1126
             E       +   ++P  D+  K  P+
Sbjct: 419  AEATLKLLQAQGVEVPSKDSLPKKRPI 445



 Score = 35.4 bits (80), Expect = 0.35
 Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 41/292 (14%)

Query: 963  DLDDLDEKDKTSIE---DVAVESSESNSLVSIPPALPPVVQHNFSVASPLTLSQDESRSV 1019
            +L+D D K K + +   ++   S + +    +P       Q +          +D S+ +
Sbjct: 115  ELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKI 174

Query: 1020 KSESDITIEVDSIAEESQEGLCERESA-------------NGFETNVASGTCSIIVQER- 1065
            K  S I    +S  +ES E L  R+               +G E + AS     + Q++ 
Sbjct: 175  KERSRINSSGES-GDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKA 233

Query: 1066 ESREKGQKRPSDGNSGLMAKKQKR---TPKRTSAAAKNEKNG----TGQSSDSEDLPVLD 1118
            E +E+ +K+  +  + L   K+K    T K+  +  K  +      T +S  + D  V+ 
Sbjct: 234  EKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIP 293

Query: 1119 NSSKC--TPVKHLNVSKPQKLARSPARISPHIKDGEKD-KHREKHPNSSPRTYKWSFQ-- 1173
             S +   TP    + ++  K  +   +     K GEK+ K +EK    S  T K   +  
Sbjct: 294  ASEEKAETPTAAEDDNEGDKKKKDKKK-----KKGEKEEKEKEKKKGPSKATVKAMQEAL 348

Query: 1174 --LNELDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDRE 1223
              L E +     E     +E+++ + +     K E      +R+R K+K++E
Sbjct: 349  AKLKEEEERQKREE----EERIKRLEELEAKRKEEERLEQEKRERKKQKEKE 396


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.126    0.342 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,872,923
Number of Sequences: 37866
Number of extensions: 2580170
Number of successful extensions: 47998
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 1207
Number of HSP's that attempted gapping in prelim test: 16049
Number of HSP's gapped (non-prelim): 19794
length of query: 1257
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1143
effective length of database: 13,930,794
effective search space: 15922897542
effective search space used: 15922897542
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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