NPTN 37346

Name: NPTN	Sequence: fasta or formatted (282aa)		NCBI GI: 9257240
Description: neuroplastin isoform a precursor		Referenced in: Notch Pathway
Other entries for this name: alt prot [394aa] neuroplastin isoform c precursor alt prot [278aa] neuroplastin isoform d precursor alt prot [398aa] neuroplastin isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 19 2 C cysteine 1.4 4 1 D aspartate 4.3 12 3 E glutamate 7.1 20 2 F phenylalanine 1.4 4 2 G glycine 5.3 15 1 H histidine 2.5 7 1 I isoleucine 6.7 19 3 K lysine 5.7 16 2 L leucine 7.8 22 3 M methionine 2.1 6 1 N asparagine 8.2 23 2 P proline 6.7 19 1 Q glutamine 1.8 5 1 R arginine 5.0 14 1 S serine 8.5 24 3 T threonine 6.4 18 1 V valine 7.4 21 2 W tryptophan 1.4 4 1 Y tyrosine 3.5 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuroplastin isoform a precursor NPTN 0.973 neuroplastin isoform d precursor NPTN 0.900 neuroplastin isoform b precursor NPTN 0.872 neuroplastin isoform c precursor BSG 0.276 basigin isoform 1 precursor BSG 0.276 basigin isoform 2 precursor BSG 0.248 basigin isoform 4 EMB 0.080 embigin TTN 0.080 titin isoform N2-A PXDN 0.077 peroxidasin NCAM1 0.064 neural cell adhesion molecule 1 isoform 1 NCAM1 0.064 neural cell adhesion molecule 1 isoform 3 LOC100292387 0.058 PREDICTED: similar to hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 LRIG1 0.058 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.055 leucine-rich repeats and immunoglobulin-like domains... LRIG3 0.055 leucine-rich repeats and immunoglobulin-like domain... HMCN1 0.055 hemicentin 1 PXDNL 0.055 peroxidasin homolog-like ROBO3 0.055 roundabout, axon guidance receptor, homolog 3 LSAMP 0.053 limbic system-associated membrane protein ROBO1 0.053 roundabout 1 isoform b LOC100289200 0.053 PREDICTED: hypothetical protein XP_002342997 ROBO1 0.053 roundabout 1 isoform a IGDCC3 0.053 putative neuronal cell adhesion molecule TTN 0.051 titin isoform novex-2 TTN 0.051 titin isoform novex-1 TTN 0.051 titin isoform N2-B NCAM1 0.051 neural cell adhesion molecule 1 isoform 2 HMCN2 0.049 PREDICTED: hemicentin 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.