Guide to the Human Genome
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Name: SLC38A9 Sequence: fasta or formatted (561aa) NCBI GI: 222418629
Description:

solute carrier family 38, member 9

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         25           2
 C cysteine            2.1         12           2
 D aspartate           3.4         19           1
 E glutamate           2.9         16           2
 F phenylalanine       8.4         47           2
 G glycine             5.9         33           2
 H histidine           3.0         17           2
 I isoleucine          9.3         52           3
 K lysine              3.2         18           2
 L leucine            11.1         62           3
 M methionine          3.4         19           2
 N asparagine          5.3         30           2
 P proline             5.3         30           2
 Q glutamine           2.7         15           2
 R arginine            3.2         18           1
 S serine              7.8         44           2
 T threonine           5.7         32           2
 V valine              6.8         38           2
 W tryptophan          1.6          9           2
 Y tyrosine            4.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 38, member 9 
SLC38A6               0.037   solute carrier family 38, member 6 
SLC38A11              0.029   solute carrier family 38, member 11 
SLC38A3               0.028   solute carrier family 38, member 3 
SLC38A8               0.027   solute carrier family 38, member 8 
SLC38A7               0.027   solute carrier family 38, member 7 
SLC36A2               0.024   solute carrier family 36, member 2 
SLC32A1               0.020   solute carrier family 32, member 1 
SLC36A4               0.020   solute carrier family 36 (proton/amino acid symporte...
SLC38A1               0.018   amino acid transporter system A1 
SLC38A1               0.018   amino acid transporter system A1 
SLC36A1               0.018   solute carrier family 36 member 1 
SLC38A5               0.017   solute carrier family 38, member 5 
SLC38A10              0.016   solute carrier family 38, member 10 isoform a 
SLC38A10              0.016   solute carrier family 38, member 10 isoform b 
SLC38A2               0.012   solute carrier family 38, member 2 
SLC38A4               0.012   solute carrier family 38, member 4 
SLC38A4               0.012   solute carrier family 38, member 4 
SLC36A3               0.011   solute carrier family 36, member 3 isoform 2 
TMEM104               0.010   transmembrane protein 104 
SLC36A3               0.009   solute carrier family 36, member 3 isoform 1 
CATSPER2              0.006   sperm-associated cation channel 2 isoform 2 
CATSPER2              0.006   sperm-associated cation channel 2 isoform 1 
C14orf102             0.004   hypothetical protein LOC55051 isoform 2 
C14orf102             0.004   hypothetical protein LOC55051 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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