Guide to the Human Genome
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Name: SLC36A3 Sequence: fasta or formatted (511aa) NCBI GI: 222446642
Description:

solute carrier family 36, member 3 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [470aa] solute carrier family 36, member 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         34           1
 C cysteine            2.5         13           1
 D aspartate           1.8          9           1
 E glutamate           3.3         17           1
 F phenylalanine       4.9         25           2
 G glycine             6.3         32           1
 H histidine           2.3         12           1
 I isoleucine          9.0         46           3
 K lysine              2.3         12           1
 L leucine            15.1         77           2
 M methionine          3.9         20           2
 N asparagine          4.3         22           1
 P proline             4.7         24           1
 Q glutamine           4.1         21           2
 R arginine            2.2         11           1
 S serine              9.8         50           4
 T threonine           5.3         27           2
 V valine              6.8         35           1
 W tryptophan          1.2          6           1
 Y tyrosine            3.5         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 36, member 3 isoform 1 
SLC36A3               0.893   solute carrier family 36, member 3 isoform 2 
SLC36A1               0.534   solute carrier family 36 member 1 
SLC36A2               0.496   solute carrier family 36, member 2 
SLC36A4               0.386   solute carrier family 36 (proton/amino acid symporte...
SLC32A1               0.043   solute carrier family 32, member 1 
C11orf80              0.038   hypothetical protein LOC79703 
MAP4K1                0.033   mitogen-activated protein kinase kinase kinase kinase...
SLC38A8               0.032   solute carrier family 38, member 8 
NEK4                  0.030   NIMA-related kinase 4 
CCNJL                 0.030   cyclin J-like 
FAM76A                0.030   hypothetical protein LOC199870 isoform 2 
FAM76A                0.030   hypothetical protein LOC199870 isoform 1 
C15orf40              0.030   hypothetical protein LOC123207 isoform b 
C20orf30              0.029   hypothetical protein LOC29058 isoform 1 
ZMAT1                 0.027   zinc finger, matrin type 1 isoform 1 
LOC100289388          0.025   PREDICTED: hypothetical protein XP_002343124 
MYL10                 0.025   myosin, light chain 10, regulatory 
RPGRIP1L              0.024   RPGRIP1-like isoform a 
IFT20                 0.024   intraflagellar transport protein IFT20 
LOC100293423          0.023   PREDICTED: hypothetical protein 
LOC100290837          0.023   PREDICTED: hypothetical protein XP_002347267 
SLC38A10              0.023   solute carrier family 38, member 10 isoform a 
SLC38A10              0.023   solute carrier family 38, member 10 isoform b 
SORBS1                0.021   sorbin and SH3 domain containing 1 isoform 4 
ADRA1A                0.020   alpha-1A-adrenergic receptor isoform 2 
BCAS4                 0.020   breast carcinoma amplified sequence 4 isoform a [Hom...
KCNRG                 0.020   potassium channel regulator isoform 2 
SLC38A4               0.019   solute carrier family 38, member 4 
SLC38A4               0.019   solute carrier family 38, member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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