Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21626468
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21626468 zinc finger protein 638 [Homo sapiens]
(1978 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62526045 zinc finger protein 638 [Homo sapiens] 3895 0.0
gi|21626468 zinc finger protein 638 [Homo sapiens] 3895 0.0
gi|62750354 matrin 3 [Homo sapiens] 72 4e-12
gi|21626466 matrin 3 [Homo sapiens] 72 4e-12
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 65 9e-10
gi|87299628 biorientation of chromosomes in cell division 1-like... 62 7e-09
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 62 7e-09
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 62 7e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 62 7e-09
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 61 9e-09
gi|116812577 LUC7-like 2 [Homo sapiens] 61 9e-09
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 60 2e-08
gi|197276594 RNA binding motif protein 20 [Homo sapiens] 59 6e-08
gi|109637759 calpastatin isoform f [Homo sapiens] 58 1e-07
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 56 4e-07
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 55 9e-07
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 54 2e-06
gi|62244004 modulator of estrogen induced transcription isoform ... 54 2e-06
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 52 6e-06
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 52 6e-06
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 52 6e-06
gi|104526627 triadin [Homo sapiens] 52 6e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 52 8e-06
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 52 8e-06
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 51 1e-05
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 51 1e-05
gi|109637771 calpastatin isoform l [Homo sapiens] 51 1e-05
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 51 1e-05
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 51 1e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 50 2e-05
>gi|62526045 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 3895 bits (10102), Expect = 0.0
Identities = 1978/1978 (100%), Positives = 1978/1978 (100%)
Query: 1 MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES 60
MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES
Sbjct: 1 MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES 60
Query: 61 YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS 120
YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS
Sbjct: 61 YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS 120
Query: 121 VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR 180
VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR
Sbjct: 121 VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR 180
Query: 181 KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN 240
KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN
Sbjct: 181 KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN 240
Query: 241 EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG 300
EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG
Sbjct: 241 EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG 300
Query: 301 GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS 360
GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS
Sbjct: 301 GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS 360
Query: 361 NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS 420
NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS
Sbjct: 361 NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS 420
Query: 421 PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE 480
PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE
Sbjct: 421 PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE 480
Query: 481 NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR 540
NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR
Sbjct: 481 NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR 540
Query: 541 SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA 600
SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA
Sbjct: 541 SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA 600
Query: 601 DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV 660
DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV
Sbjct: 601 DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV 660
Query: 661 SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 720
SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME
Sbjct: 661 SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 720
Query: 721 FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA 780
FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA
Sbjct: 721 FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA 780
Query: 781 SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK 840
SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK
Sbjct: 781 SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK 840
Query: 841 SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE 900
SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE
Sbjct: 841 SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE 900
Query: 901 TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY 960
TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY
Sbjct: 901 TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY 960
Query: 961 TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG 1020
TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG
Sbjct: 961 TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG 1020
Query: 1021 LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS 1080
LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS
Sbjct: 1021 LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS 1080
Query: 1081 PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL 1140
PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL
Sbjct: 1081 PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL 1140
Query: 1141 VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL
Sbjct: 1141 VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
Query: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE 1260
NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE
Sbjct: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE 1260
Query: 1261 AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET 1320
AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
Sbjct: 1261 AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET 1320
Query: 1321 RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS 1380
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS
Sbjct: 1321 RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS 1380
Query: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL 1440
ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL
Sbjct: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL 1440
Query: 1441 KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM 1500
KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM
Sbjct: 1441 KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM 1500
Query: 1501 KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP 1560
KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP
Sbjct: 1501 KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP 1560
Query: 1561 LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT 1620
LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT
Sbjct: 1561 LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT 1620
Query: 1621 VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL 1680
VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL
Sbjct: 1621 VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL 1680
Query: 1681 VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ 1740
VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ
Sbjct: 1681 VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ 1740
Query: 1741 DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND 1800
DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND
Sbjct: 1741 DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND 1800
Query: 1801 HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK 1860
HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK
Sbjct: 1801 HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK 1860
Query: 1861 TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD 1920
TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD
Sbjct: 1861 TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD 1920
Query: 1921 FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR 1978
FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR
Sbjct: 1921 FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR 1978
>gi|21626468 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 3895 bits (10102), Expect = 0.0
Identities = 1978/1978 (100%), Positives = 1978/1978 (100%)
Query: 1 MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES 60
MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES
Sbjct: 1 MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES 60
Query: 61 YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS 120
YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS
Sbjct: 61 YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDEPHISASVAVKQSS 120
Query: 121 VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR 180
VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR
Sbjct: 121 VTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR 180
Query: 181 KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN 240
KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN
Sbjct: 181 KMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVEN 240
Query: 241 EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG 300
EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG
Sbjct: 241 EFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISG 300
Query: 301 GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS 360
GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS
Sbjct: 301 GQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSS 360
Query: 361 NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS 420
NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS
Sbjct: 361 NVHVGSRGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAAS 420
Query: 421 PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE 480
PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE
Sbjct: 421 PRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKE 480
Query: 481 NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR 540
NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR
Sbjct: 481 NETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSR 540
Query: 541 SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA 600
SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA
Sbjct: 541 SPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAA 600
Query: 601 DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV 660
DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV
Sbjct: 601 DKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAV 660
Query: 661 SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 720
SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME
Sbjct: 661 SLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEME 720
Query: 721 FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA 780
FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA
Sbjct: 721 FKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADA 780
Query: 781 SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK 840
SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK
Sbjct: 781 SKAVEIVTSTSAAKTGQAKASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKK 840
Query: 841 SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE 900
SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE
Sbjct: 841 SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKE 900
Query: 901 TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY 960
TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY
Sbjct: 901 TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFY 960
Query: 961 TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG 1020
TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG
Sbjct: 961 TCFPVLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDG 1020
Query: 1021 LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS 1080
LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS
Sbjct: 1021 LQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLS 1080
Query: 1081 PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL 1140
PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL
Sbjct: 1081 PKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETL 1140
Query: 1141 VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL
Sbjct: 1141 VQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
Query: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE 1260
NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE
Sbjct: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE 1260
Query: 1261 AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET 1320
AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
Sbjct: 1261 AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET 1320
Query: 1321 RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS 1380
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS
Sbjct: 1321 RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS 1380
Query: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL 1440
ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL
Sbjct: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL 1440
Query: 1441 KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM 1500
KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM
Sbjct: 1441 KPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIM 1500
Query: 1501 KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP 1560
KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP
Sbjct: 1501 KRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNP 1560
Query: 1561 LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT 1620
LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT
Sbjct: 1561 LKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVT 1620
Query: 1621 VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL 1680
VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL
Sbjct: 1621 VDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERL 1680
Query: 1681 VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ 1740
VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ
Sbjct: 1681 VTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQ 1740
Query: 1741 DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND 1800
DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND
Sbjct: 1741 DDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKND 1800
Query: 1801 HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK 1860
HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK
Sbjct: 1801 HPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGK 1860
Query: 1861 TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD 1920
TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD
Sbjct: 1861 TLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD 1920
Query: 1921 FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR 1978
FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR
Sbjct: 1921 FLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR 1978
>gi|62750354 matrin 3 [Homo sapiens]
Length = 847
Score = 72.4 bits (176), Expect = 4e-12
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 38/400 (9%)
Query: 921 EVYDLAKPFGGLKDILILSSHKKAYIEI-NRKAAESMVKFYTCFPVLMDGNQLSISMAPE 979
++ L +PFG + + LIL+ +A+IE+ + A++ V +YT P L+ G + + ++ +
Sbjct: 414 QLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQK 473
Query: 980 NMNIKDEEAIFITLVKENDPEANIDTIYD--RFVHLDNLPEDGL--QCVLCVGLQFGKVD 1035
IK E P+ D + R +HL NLP G VL + +GK+
Sbjct: 474 YKRIKK---------PEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIK 524
Query: 1036 HHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQI-EHDP 1094
+++ + +++A +++++ E A +M + + LS K ++I
Sbjct: 525 NYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGI 584
Query: 1095 ELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKA 1154
+L K+ K S + + +SPS K ++ + TE +QEE E+ EK
Sbjct: 585 DLLKKDKSRKRSYSPDGK-----ESPSDKKSKTDGSQKTESSTEG-KEQEEKSGEDGEKD 638
Query: 1155 TCDSDFAVE-TLELETQGEEVKEE----IPLVASASVSIEQFTENAEECALNQQMFNSD- 1208
T D E + LE++ E + +E L + +SV E N + A + + SD
Sbjct: 639 TKDDQTEQEPNMLLESEDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDK 698
Query: 1209 -LEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGI----------TQT 1257
++K G+ K L D + ++ + LE E+ G T
Sbjct: 699 AVKKDGSASAAAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNKDT 758
Query: 1258 MVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDK 1297
A + ++N+ I I P +P G + + K
Sbjct: 759 SENADGQSDENKDDYTIPDEYRIGPYQPNVPVGIDYVIPK 798
Score = 70.5 bits (171), Expect = 2e-11
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 56/246 (22%)
Query: 1781 GEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGP----VNEN--- 1833
G+E D K + +Q K + T+ K +K D +K + ++ P +E+
Sbjct: 601 GKESPSDKKSKTDGSQ-KTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLESEDELL 659
Query: 1834 VMEEDLKTMIERHLTAKTPTKRVRIG------KTLPSEKAVVTEPA-------------K 1874
V EE+ ++E + T +G K PS+KAV + + K
Sbjct: 660 VDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKLKKVDK 719
Query: 1875 GEEAFQMSEVDEESGLKDSE-----------PERKRKKTEDSSSGKSVAS---------- 1913
EE Q +E E+G+K+ E + K T +++ G+S +
Sbjct: 720 IEELDQENEAALENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEY 779
Query: 1914 -------DVPEELDFLVPKAGFFCPICSLFYSGEKAMTN-HCKSTRHKQNTEKFMAKQRK 1965
+VP +D+++PK GF+C +CSLFY+ E+ N HC S H Q +KF+ K +
Sbjct: 780 RIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLNKLAE 839
Query: 1966 EKEQNE 1971
E+ Q +
Sbjct: 840 ERRQKK 845
Score = 64.7 bits (156), Expect = 9e-10
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 402 QKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQY 461
+K + P S + D++ P+ +PHLCS+C++ K+W QH N ++H C+ L + Y
Sbjct: 267 EKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPVHSNKEWSQHINGASHSRRCQLLLEIY 326
Query: 462 PDWNPEILPSRRNEGNRKENETPRRRSHSPSP 493
P+WNP+ + G+ + ++S +P+P
Sbjct: 327 PEWNPD-----NDTGHTMGDPFMLQQSTNPAP 353
Score = 60.8 bits (146), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 132 QSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMRK 181
Q R + AS+ILASFGLS DL+ELSRYP++++TPEN+P IL ++ R+
Sbjct: 100 QHRGDADQASNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRR 149
Score = 59.3 bits (142), Expect = 4e-08
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 669 EQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAI 728
+Q G V+ ++ LP G ++ V KL +P+GK+ + +++ + +A++EME +E A+
Sbjct: 489 DQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAM 548
Query: 729 MKYIETTPLTIKGKSVKICVPGKKK--------------AQNKEVKKKTLESKKVSASTL 774
+ + L +G+ VK+ + K K ++K K+ K S S
Sbjct: 549 VDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPSDK 608
Query: 775 KRDADASKAVEIVT--STSAAKTGQAKASVAKVNKS-----------------TGKSASS 815
K D S+ E T K+G+ K +++ ++A+
Sbjct: 609 KSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLESEDELLVDEEEAAAL 668
Query: 816 VKSVVTVAVKGNKASIKTAKSGGKK---SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIE 872
++S +V + + A++ S GKK KK G+ K + + E+ E
Sbjct: 669 LESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKLKKVDKIEELDQENE 728
Query: 873 VKATENCAKEAISDAALEATEN-EPLNKETEE 903
E ++ E++EN + NK+T E
Sbjct: 729 AALENGIKNEENTEPGAESSENADDPNKDTSE 760
Score = 42.4 bits (98), Expect = 0.005
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 890 EATENEPLNKETEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEI- 948
E ++ +++ E V+ +SNLP+ GYS V LA+P+G +K+ +++ +A+IE+
Sbjct: 481 EGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME 540
Query: 949 NRKAAESMV 957
R+ A +MV
Sbjct: 541 TREDAMAMV 549
Score = 40.8 bits (94), Expect = 0.013
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 695 KLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIKGKSVKICVPGKKKA 754
+L +PFG +++ LI+ EA++EM E A + Y TTP + GK V++ + K K
Sbjct: 417 QLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKR 476
Query: 755 QNK 757
K
Sbjct: 477 IKK 479
>gi|21626466 matrin 3 [Homo sapiens]
Length = 847
Score = 72.4 bits (176), Expect = 4e-12
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 38/400 (9%)
Query: 921 EVYDLAKPFGGLKDILILSSHKKAYIEI-NRKAAESMVKFYTCFPVLMDGNQLSISMAPE 979
++ L +PFG + + LIL+ +A+IE+ + A++ V +YT P L+ G + + ++ +
Sbjct: 414 QLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQK 473
Query: 980 NMNIKDEEAIFITLVKENDPEANIDTIYD--RFVHLDNLPEDGL--QCVLCVGLQFGKVD 1035
IK E P+ D + R +HL NLP G VL + +GK+
Sbjct: 474 YKRIKK---------PEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIK 524
Query: 1036 HHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQI-EHDP 1094
+++ + +++A +++++ E A +M + + LS K ++I
Sbjct: 525 NYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGI 584
Query: 1095 ELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKA 1154
+L K+ K S + + +SPS K ++ + TE +QEE E+ EK
Sbjct: 585 DLLKKDKSRKRSYSPDGK-----ESPSDKKSKTDGSQKTESSTEG-KEQEEKSGEDGEKD 638
Query: 1155 TCDSDFAVE-TLELETQGEEVKEE----IPLVASASVSIEQFTENAEECALNQQMFNSD- 1208
T D E + LE++ E + +E L + +SV E N + A + + SD
Sbjct: 639 TKDDQTEQEPNMLLESEDELLVDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDK 698
Query: 1209 -LEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGI----------TQT 1257
++K G+ K L D + ++ + LE E+ G T
Sbjct: 699 AVKKDGSASAAAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNKDT 758
Query: 1258 MVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDK 1297
A + ++N+ I I P +P G + + K
Sbjct: 759 SENADGQSDENKDDYTIPDEYRIGPYQPNVPVGIDYVIPK 798
Score = 70.5 bits (171), Expect = 2e-11
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 56/246 (22%)
Query: 1781 GEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGP----VNEN--- 1833
G+E D K + +Q K + T+ K +K D +K + ++ P +E+
Sbjct: 601 GKESPSDKKSKTDGSQ-KTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLESEDELL 659
Query: 1834 VMEEDLKTMIERHLTAKTPTKRVRIG------KTLPSEKAVVTEPA-------------K 1874
V EE+ ++E + T +G K PS+KAV + + K
Sbjct: 660 VDEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKLKKVDK 719
Query: 1875 GEEAFQMSEVDEESGLKDSE-----------PERKRKKTEDSSSGKSVAS---------- 1913
EE Q +E E+G+K+ E + K T +++ G+S +
Sbjct: 720 IEELDQENEAALENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEY 779
Query: 1914 -------DVPEELDFLVPKAGFFCPICSLFYSGEKAMTN-HCKSTRHKQNTEKFMAKQRK 1965
+VP +D+++PK GF+C +CSLFY+ E+ N HC S H Q +KF+ K +
Sbjct: 780 RIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLNKLAE 839
Query: 1966 EKEQNE 1971
E+ Q +
Sbjct: 840 ERRQKK 845
Score = 64.7 bits (156), Expect = 9e-10
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 402 QKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQY 461
+K + P S + D++ P+ +PHLCS+C++ K+W QH N ++H C+ L + Y
Sbjct: 267 EKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPVHSNKEWSQHINGASHSRRCQLLLEIY 326
Query: 462 PDWNPEILPSRRNEGNRKENETPRRRSHSPSP 493
P+WNP+ + G+ + ++S +P+P
Sbjct: 327 PEWNPD-----NDTGHTMGDPFMLQQSTNPAP 353
Score = 60.8 bits (146), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 132 QSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMRK 181
Q R + AS+ILASFGLS DL+ELSRYP++++TPEN+P IL ++ R+
Sbjct: 100 QHRGDADQASNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRR 149
Score = 59.3 bits (142), Expect = 4e-08
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 669 EQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAI 728
+Q G V+ ++ LP G ++ V KL +P+GK+ + +++ + +A++EME +E A+
Sbjct: 489 DQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAM 548
Query: 729 MKYIETTPLTIKGKSVKICVPGKKK--------------AQNKEVKKKTLESKKVSASTL 774
+ + L +G+ VK+ + K K ++K K+ K S S
Sbjct: 549 VDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPSDK 608
Query: 775 KRDADASKAVEIVT--STSAAKTGQAKASVAKVNKS-----------------TGKSASS 815
K D S+ E T K+G+ K +++ ++A+
Sbjct: 609 KSKTDGSQKTESSTEGKEQEEKSGEDGEKDTKDDQTEQEPNMLLESEDELLVDEEEAAAL 668
Query: 816 VKSVVTVAVKGNKASIKTAKSGGKK---SLEAKKTGNVKNKDSNKPVTIPENSEIKTSIE 872
++S +V + + A++ S GKK KK G+ K + + E+ E
Sbjct: 669 LESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDGSASAAAKKKLKKVDKIEELDQENE 728
Query: 873 VKATENCAKEAISDAALEATEN-EPLNKETEE 903
E ++ E++EN + NK+T E
Sbjct: 729 AALENGIKNEENTEPGAESSENADDPNKDTSE 760
Score = 42.4 bits (98), Expect = 0.005
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 890 EATENEPLNKETEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEI- 948
E ++ +++ E V+ +SNLP+ GYS V LA+P+G +K+ +++ +A+IE+
Sbjct: 481 EGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME 540
Query: 949 NRKAAESMV 957
R+ A +MV
Sbjct: 541 TREDAMAMV 549
Score = 40.8 bits (94), Expect = 0.013
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 695 KLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIKGKSVKICVPGKKKA 754
+L +PFG +++ LI+ EA++EM E A + Y TTP + GK V++ + K K
Sbjct: 417 QLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKR 476
Query: 755 QNK 757
K
Sbjct: 477 IKK 479
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 64.7 bits (156), Expect = 9e-10
Identities = 166/913 (18%), Positives = 360/913 (39%), Gaps = 136/913 (14%)
Query: 1042 NRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQIEHDPE----LE 1097
++ + LQ + + + L+Q + IGD KI E ++ E LE
Sbjct: 490 HQEQQALQQSTTAKLREAQNDLEQVLRQIGDK------DQKIQNLEALLQKSKENISLLE 543
Query: 1098 KESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCD 1157
KE L + I E +TA + + N +E + TE L Q E ++ E
Sbjct: 544 KEREDLY-AKIQAGEGETAVLNQLQEKNHTLQEQVTQL-TEKLKNQSESHKQAQEN---- 597
Query: 1158 SDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEI- 1216
L Q +E K + +S+E LN Q+ S + +I
Sbjct: 598 ---------LHDQVQEQKAHLRAAQDRVLSLETSVNE-----LNSQLNESKEKVSQLDIQ 643
Query: 1217 INPKTALLPSDSVF--AEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEI 1274
I KT LL S A+ +L+ L+ + + +D K + +++I
Sbjct: 644 IKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQD-----------------KQQELNKI 686
Query: 1275 LPSTCIVTLVPGIPTGDEKTVDKK-NISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEK 1333
VT K DK+ + S+ + ++ E +EK + ++ +L+ +K E
Sbjct: 687 TTQLDQVTA---------KLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEA 737
Query: 1334 NEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPS 1393
+ + A K + + ++++ NT + + Q E ++ L + S + S
Sbjct: 738 DSLEVKASKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEIVSSTRLDLQKKSEALES 797
Query: 1394 IKAVIVSSPKAKATVSKTENQKSFPKSVPRDQIN---------AEKKLSAKEFGLLKPTS 1444
IK + + K + + S + +++N +K KE + + ++
Sbjct: 798 IKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEALMTELST 857
Query: 1445 ARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQ-------------SQ 1491
+ L++ S K ++S + +GK + LD K+ +
Sbjct: 858 VKDKLSKVSDSLKNSKSEFEKENQ------KGKAAILDLEKTCKELKHQLQVQMENTLKE 911
Query: 1492 ETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSS---KSKEEPLFPFNLDEFVT----- 1543
+ E + S+ K +++++ E N+ + +++ KEE N++E
Sbjct: 912 QKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQK 971
Query: 1544 ---VDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVT 1600
++ + E+ + ++ L+ K ++ L EL +K+K + + +F
Sbjct: 972 KKQIEALQGELKIAVLQKTELENKLQQQLTQAA-QELAAEKEKISVLQNNYEKSQETFKQ 1030
Query: 1601 L--DEIGEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELI--------- 1649
L D G E + A Q L +V+E + L E+++ N N + ++LI
Sbjct: 1031 LQSDFYGRESELLA-TRQDLKSVEEKLS---LAQEDLISNRNQIGNQNKLIQELKTAKAT 1086
Query: 1650 -DQDDCISHSEPKD--VTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLN 1706
+QD + ++ + + +E+ L ++E + ++ E+EE+ + +IT
Sbjct: 1087 LEQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSKLAEIEEIKCRQEKEITKLNEE 1146
Query: 1707 TKGNEGDTV------RDSIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDED 1760
K ++ +++ +D+ + Q E ++ + + D+V +E+E+
Sbjct: 1147 LKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEE 1206
Query: 1761 SLADFNNLKEELNF-VTVDEVGEEEDGDNDLKVEL---AQSKNDHPTDKKGNRKKRAVDT 1816
+F + +L+ + EVG ++ +N+ K+ + A ++N K+ +R V
Sbjct: 1207 LKKEFIEKEAKLHSEIKEKEVGMKKHEENEAKLTMQITALNENLGTVKKEWQSSQRRVSE 1266
Query: 1817 KKTKLESL-SQVGPVNENVM--EEDLKTMIERHLTA-----KTPTKRVRIGKTLPSEKAV 1868
+ + + L ++ + V +++ + ++ER L K TK + + + L + A
Sbjct: 1267 LEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAA 1326
Query: 1869 VTEPAKGEEAFQM 1881
V E + ++ Q+
Sbjct: 1327 VQELGRENQSLQI 1339
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 61.6 bits (148), Expect = 7e-09
Identities = 206/1001 (20%), Positives = 369/1001 (36%), Gaps = 120/1001 (11%)
Query: 1060 YSFLKQNPQN-IGDHMLTCSLSPKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATD 1118
Y L+Q N + +H+ T + SP ++ + Q+ ++ + G+ S ID Q
Sbjct: 84 YQNLRQRVDNFVANHLATHTWSPHLN--KNQLRNNIRQQVLKSGMLESGIDRIISQVVDP 141
Query: 1119 SPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEI 1178
K N E L +EE T D +T L TQG
Sbjct: 142 ----KINHTFRPQVEKAVHEFLATLNH--KEEGSGNTAPDDEKPDT-SLITQGVPTPGPS 194
Query: 1179 PLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTALLPS-DSVFAEERNLK 1237
VA+ ++SI + + + A + K +E + K P+ D+ +ER +
Sbjct: 195 ANVANDAMSILETITSLNQEASAARASTETSNAKTSERASKKLPSQPTTDTSTDKERTSE 254
Query: 1238 GILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTV-- 1295
+ ++ S A+ SG E + K+E S++ C V + +
Sbjct: 255 DMADKEKSTAD---SG-----GEGLETAPKSEEFSDL---PCPVEEIKNYTKEHNNLILL 303
Query: 1296 ---DKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEK----NEGRMDAEKVEKMAA 1348
++ SE+K +K EK+ ++ E + EK EK ++ D +KV+
Sbjct: 304 NKDVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQ 363
Query: 1349 MKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSSPKAKATV 1408
KEK E+ K K +A + T + L SDV I V + +
Sbjct: 364 AKEKEVES--LKLPSEKNSNKAKTVEGTKEDFSLIDSDVDGLT-DITVSSVHTSDLSSFE 420
Query: 1409 SKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKF----KP-TQSSL 1463
TE + S+ +I ++ + K+ TS S S + KP S
Sbjct: 421 EDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKY 480
Query: 1464 TRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKST-T 1522
++ Q + S I K+ +E R I + + + TK+ K+
Sbjct: 481 YSDSDDELTVEQRRQS------IAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQ 534
Query: 1523 GRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKK 1582
GRSS EE + + EV++E + K+ L KRK+ +NV E N KKK
Sbjct: 535 GRSSVDLEESSTKSLEPKAARIKEVLKERKVLE-KKVALSKKRKKDSRNV---EENSKKK 590
Query: 1583 KG---------KTSTPRGVEGELSFVTLDEI---GEEEDAAAHLAQALVTVDEVIDEEEL 1630
+ KTS E S L + E A L+++L VDE +E +L
Sbjct: 591 QQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSESLHVVDENKNESKL 650
Query: 1631 NMEEMVKNSNSLFT--LDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVD---- 1684
E + S + + E D D E ++ +++ LK E+ + D
Sbjct: 651 EREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLKKDDSET 710
Query: 1685 ---------EIGEVEELPLNE---SADITFATLNTKGNEGDTVRDSIGFISSQVPEDPST 1732
E+ +E P E S D KG+ D SS+
Sbjct: 711 PHLKSLLKKEVKSSKEKPEREKTPSEDKLSVKHKYKGDCMHKTGDETELHSSE-----KG 765
Query: 1733 LVTVDEIQDDSSDLHLVTLDEVTEEDED------SLADFNNLKEELNFVTVDEVGEEEDG 1786
L + IQ S L + D+ + + S+ + + DE +E+
Sbjct: 766 LKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENN 825
Query: 1787 DNDLKVELAQSKNDHPTDKKGNRK--KRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIE 1844
+ ++ ++K +H + + + K K ++ +K+ + + +E+ + D M
Sbjct: 826 KKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDS 885
Query: 1845 RHLTAKTPTKRVRIGKTLPSEKAVVTEPAK--GEEAFQMSEVDEESGLKDSEPER--KRK 1900
+ K R K+L EK V+ +K G++ + +E K + + K K
Sbjct: 886 NLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQVKVVETELQEGATKQATTPKPDKEK 945
Query: 1901 KTEDSSSGKSVASDVPEE------LDFLVPKAGFFC-------------PICSLFYSGEK 1941
TE++ S K S V ++ ++ ++ A P+ Y +K
Sbjct: 946 NTEENDSEKQRKSKVEDKPFEETGVEPVLETASSSAHSTQKDSSHRAKLPLAKEKYKSDK 1005
Query: 1942 AMTN----HCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR 1978
T+ S HK + K +K K+K++N+++++ +
Sbjct: 1006 DSTSTRLERKLSDGHKSRSLKHSSKDIKKKDENKSDDKDGK 1046
Score = 38.5 bits (88), Expect = 0.066
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 1736 VDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELA 1795
++E+ SS+ + T + E+DE S ++ K E N D+ + ++ D + ++
Sbjct: 2818 LEELPKTSSETNSTTSRVMEEKDEYSSSETTGEKPEQND---DDTIKSQEEDQPIIIKR- 2873
Query: 1796 QSKNDHPTDKKGNRKKRAVDTK-KTKLESLSQVG--PVNENVMEEDLKTMIERHLTAKTP 1852
K+G +K V+T K K +S + G V ++ LK M +T
Sbjct: 2874 ---------KRGRPRKYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQTDESNKETA 2924
Query: 1853 TKRVR-IGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKT-----EDSS 1906
+ R I EK V + +G + + V +++ + SEPERKR+K+ ED
Sbjct: 2925 NLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDA--ESSEPERKRQKSVSDPVEDKK 2982
Query: 1907 SGKSVASDVPEELD 1920
+S + EE D
Sbjct: 2983 EQESDEEEEEEEED 2996
Score = 37.7 bits (86), Expect = 0.11
Identities = 108/578 (18%), Positives = 204/578 (35%), Gaps = 75/578 (12%)
Query: 1091 EHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEE---STPSIQTETLVQQEEPC 1147
+++ +LE+E ++P+ VQ TD+ VK E P Q TL ++
Sbjct: 645 KNESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLK 704
Query: 1148 EEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNS 1207
++++E S E + + E +E+ P SV + + + ++ +S
Sbjct: 705 KDDSETPHLKSLLKKEVKSSKEKPE--REKTPSEDKLSVKHKYKGDCMHKTGDETELHSS 762
Query: 1208 DLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEK 1267
+ K E I ++ S ER K E S +++ +++ V K
Sbjct: 763 EKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRK 822
Query: 1268 NETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNM------DEKEEKEFNTKETR 1321
E S + + K ++ K+ + + E + + T
Sbjct: 823 ENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTN 882
Query: 1322 MDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSI 1381
MD + E+ E R +E+ +K K +K G+ K ET +
Sbjct: 883 MDSNLKPEEVVHKEKRRTKSLLEEKLVLKSK-----------SKTQGKQVKVVET-ELQE 930
Query: 1382 LAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKL---SAKEFG 1438
A ++ KP + + K SK E++ P ++ E L S+
Sbjct: 931 GATKQATTPKPDKEKNTEENDSEKQRKSKVEDK-------PFEETGVEPVLETASSSAHS 983
Query: 1439 LLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPS 1498
K +S R+ L + K+K + S + + L+ KLS K S + +
Sbjct: 984 TQKDSSHRAKLPLAKEKYKSDKDSTS-------TRLERKLSDGHKSRSLKHSSKDIKKKD 1036
Query: 1499 IMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQ 1558
K DD + K + + K G SS +++ + + E Q
Sbjct: 1037 ENKSDDKDGKEVDSSHEK----ARGNSSLMEKK------------LSRRLCENRRGSLSQ 1080
Query: 1559 NPLKGKRK---ETLKNVPFSELNLKKKKGKTS-----TPRGVEGELSFVTLDEIGEEEDA 1610
KG+ K TL S L KK G + P ++ E + E+ + +D
Sbjct: 1081 EMAKGEEKLAANTLSTPSGSSLQRPKKSGDMTLIPEQEPMEIDSEPGVENVFEVSKTQDN 1140
Query: 1611 AAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDEL 1648
+ +Q ++++ E M + +++ DEL
Sbjct: 1141 RNNNSQ-----------QDIDSENMKQKTSATVQKDEL 1167
Score = 31.6 bits (70), Expect = 8.1
Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 1481 LDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDE 1540
LD R T Q Q E P K ++S + + + STT R + K DE
Sbjct: 2791 LDSRIETAQRQCPETEPHDTKEENSRDLEELPKTSSETNSTTSRVMEEK---------DE 2841
Query: 1541 FVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVT 1600
+ + + E+ P Q + +K + ++ + +K+K+G+ PR E +
Sbjct: 2842 YSSSETTGEK--PEQNDDDTIKSQEED-------QPIIIKRKRGR---PRKYPVETTLKM 2889
Query: 1601 LDEIGEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEP 1660
D+ + +VTV++ +L + + +++ L Q+ IS+ +
Sbjct: 2890 KDD--------SKTDTGIVTVEQSPSSSKLKVMQTDESNKETANL-----QERSISNDDG 2936
Query: 1661 KDVTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGD 1713
++ V SV K +R +TV + E E ++ + K E D
Sbjct: 2937 EEKIVTSVRRRG--RKPKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESD 2987
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 61.6 bits (148), Expect = 7e-09
Identities = 226/1161 (19%), Positives = 411/1161 (35%), Gaps = 191/1161 (16%)
Query: 471 SRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFI 530
S R+ + RS+S SP RR R RSRS H +R RSRSP
Sbjct: 675 STRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPP-----Y 729
Query: 531 SRYRSRSRSRSPYRIRNP-FRGSPK---------CFRSVSPE-RMSRRSVRSSDRKKALE 579
RY SRSRS +R ++P R P+ +R V P M RS D + E
Sbjct: 730 RRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFE 789
Query: 580 DVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKP-----------SVKPTSATKS 628
R E ++ E KG++ +P+ S+ + P + +
Sbjct: 790 KERYRE---WERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRR 846
Query: 629 DSNLGGHSIRCKS--------------KNLEDDTLSECKQ----VSDKAVSLQRKLRKEQ 670
+ +GG S R ++ N +D+T S+ K+ D + +K RK +
Sbjct: 847 EDYVGGQSHRSRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRR 906
Query: 671 SLHYGSVLLITELPEDGCTEEDVRKLFQPFG----KVNDVLIVPYRKEAY-LEMEFKEAI 725
L EL E RK +P G K + + ++P R +A + E +A
Sbjct: 907 KGEESEGFLNPELLETS------RKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAE 960
Query: 726 TAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVE 785
+ K + + K K+K V KK K K D + ++
Sbjct: 961 SITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPR 1020
Query: 786 IVTSTSAAKTGQAKASVAKVNKSTGK------------SASSVKSVVTVAVKGNKASIKT 833
AK K K + S+ K S S+ + T VK K
Sbjct: 1021 SEPPIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDY 1080
Query: 834 AKSGGKKSLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATE 893
+K + L K+ K + NKP+ + + E ++ ++ + LE TE
Sbjct: 1081 SKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTE 1140
Query: 894 ------NEPLNKETEEM----------------CVMLVSNLPNKGYSVEEVYDLAKPFGG 931
+ +TE+M + L K S E + + +P
Sbjct: 1141 IVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEK 1200
Query: 932 LKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQLSISMAPENMNIKDEEAIFI 991
L+ +K ++ RK + T L+D S S + K EE
Sbjct: 1201 LESTSSKVKQEKVKGKVRRKVTGTEGSSST----LVD--YTSTSSTGGSPVRKSEE---- 1250
Query: 992 TLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQFGKVDHHVFISNRN--KAILQ 1049
+ D + + + + + + P + + ++ + + K D F S K+
Sbjct: 1251 ----KTDTKRTVIKTMEEYNNDNTAPAEDV--IIMIQVPQSKWDKDDFESEEEDVKSTQP 1304
Query: 1050 LDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQIEHDPELEKESPGLKNSPID 1109
+ S S+ + P NI + PE + E +++K + + + I
Sbjct: 1305 ISSVGKPASVIKNVSTKPSNI------------VKYPEKESEPSEKIQKFTKDVSHE-II 1351
Query: 1110 ESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETLELET 1169
+ EV+++ +S S + + ++ ++ E +++ + E E + L
Sbjct: 1352 QHEVKSSKNSASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQ 1411
Query: 1170 QGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTALLPSDSV 1229
+E + ++ + S + FT N ++ +D + + S S
Sbjct: 1412 SSKEARTSDKHDSTRASSNKDFTPNRDK--------KTDYDTREY-----------SSSK 1452
Query: 1230 FAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPT 1289
+E+N ++SPS +D SG +KN+ E +P T
Sbjct: 1453 RRDEKNELTRRKDSPSRNKDSASG------------QKNKPREE--------RDLPKKGT 1492
Query: 1290 GDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAEKVEKMAAM 1349
GD K K N S + + ++TK + T+ +KN + + V +
Sbjct: 1493 GDSK---KSNSSPSRDRKPHDHKATYDTKRPNEE----TKSVDKNPCKDREKHVLEARNN 1545
Query: 1350 KEKPAENTLFKAYP-------NKGVGQANKPDETSKTSILAVSDVSS--SKPSIKAVI-- 1398
KE L+ P + GQ +K K + S +SS ++ + +A
Sbjct: 1546 KESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEP 1605
Query: 1399 ---VSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSK 1455
S ++ +V + E+ + K + +D+I + K S +++ +R+ + SS
Sbjct: 1606 DYNESDSESNVSVKEEESSGNISKDL-KDKIVEKAKESLDTAAVVQVGISRN-QSHSSPS 1663
Query: 1456 FKPTQS-----SLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTL 1510
P++S S TR S S+ + + SK + K+ + + K+ L
Sbjct: 1664 VSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVEL 1723
Query: 1511 AEQNTKNPKSTTGRSSKSKEE 1531
+ K + +K KE+
Sbjct: 1724 EKSQKHKHKKKKSKKNKDKEK 1744
Score = 60.8 bits (146), Expect = 1e-08
Identities = 187/965 (19%), Positives = 342/965 (35%), Gaps = 157/965 (16%)
Query: 466 PEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSS-SSHRFRRSRSPMHYMYRP------ 518
PE L S R+ N+K+N + + +P + + HR RR P
Sbjct: 865 PEKL-SARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETS 923
Query: 519 -RSRSPRICHRFISRYRSRSRSRSPYRI-RNPFRGSPKCFRSVSPERMSRRSVRSSDRKK 576
+SR P + ++ S P R P R P S++ + +S + R D+ K
Sbjct: 924 RKSREPT----GVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPK 979
Query: 577 ALEDVVQRSGHGTEFNKQKHL---------------EAADKGHSPAQKPKTSSGTKPSVK 621
A D +R G+ +K++++ E + + P +K K + + K
Sbjct: 980 AKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTK 1039
Query: 622 PTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLIT 681
+S+++ D + G + SK+ ++ E K V ++ K++K+ S S L T
Sbjct: 1040 SSSSSQKDEKITGTPRKAHSKSAKEH--QETKPVKEE------KVKKDYSKDVKSEKLTT 1091
Query: 682 ELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRK--EAYLEMEFKEAITAIMKYIETTPLTI 739
+ EE +K + +++ RK E ++ +F+ + I K +E T +
Sbjct: 1092 K-------EEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISK-LEVTEIVK 1143
Query: 740 KGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQAK 799
P +K + E +T E K+S S A
Sbjct: 1144 PS-------PKRKMEPDTEKMDRTPEKDKISLS-------------------------AP 1171
Query: 800 ASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSNKPV 859
A K+N+ TGK S ++ + K + +S K + K G V+ K V
Sbjct: 1172 AKKIKLNRETGKKIGSTEN-----ISNTKEPSEKLESTSSKVKQEKVKGKVRRK-----V 1221
Query: 860 TIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEM---------CVMLVS 910
T E S T ++ +T + + + + + K EE V+++
Sbjct: 1222 TGTEGSS-STLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMI 1280
Query: 911 NLPNKGY-------------SVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMV 957
+P + S + + + KP +K++ S+ Y E + +E +
Sbjct: 1281 QVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQ 1340
Query: 958 KFYTCFP---VLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLD 1014
KF + + S + E KD + + L KEN + T ++ +LD
Sbjct: 1341 KFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRD--YSVLEKENPEKRKNSTQPEKESNLD 1398
Query: 1015 NLPEDGLQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPES--AQSMYSFLKQNPQNIGD 1072
L E G + +S +K D +S A S F +
Sbjct: 1399 RLNEQG---------------NFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDY 1443
Query: 1073 HMLTCSLSPKIDLPE--VQIEHDPELEKES-PGLKNSPIDESEVQTATDSPSVKPNELEE 1129
S S + D + + P K+S G KN P +E ++ S K N
Sbjct: 1444 DTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPS 1503
Query: 1130 ESTPSIQTETLVQQEEPCEE--EAEKATCDSDFAVETLELETQGEEVKEEIPLVAS---A 1184
+ + P EE +K C D LE E ++ + +
Sbjct: 1504 RDRKPHDHKATYDTKRPNEETKSVDKNPC-KDREKHVLEARNNKESSGNKLLYILNPPET 1562
Query: 1185 SVSIEQFTENAEECALNQQMFNSDLEKKGAEII--NPKTALLPSDSVFAEERNLKGILEE 1242
V EQ T ++ + + S + +++ + A P + E N+ EE
Sbjct: 1563 QVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEE 1622
Query: 1243 S----PSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKK 1298
S + +D I + ++ A V+ + ++ S + P+G +
Sbjct: 1623 SSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSS 1682
Query: 1299 NI-------SEKKGNMDEKEEKEFNTKETRMDLQIGTE-KAEKNEGRMDAEKVEKMAAMK 1350
+ S+KK EK++ + + K + GTE + EK++ +K K K
Sbjct: 1683 SASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDK 1742
Query: 1351 EKPAE 1355
EK E
Sbjct: 1743 EKEKE 1747
Score = 54.7 bits (130), Expect = 9e-07
Identities = 147/735 (20%), Positives = 268/735 (36%), Gaps = 86/735 (11%)
Query: 1285 PGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNT---------KETRMDLQIGTEKAEKNE 1335
P I E+T K + K + +K+EK T KE + + EK +K+
Sbjct: 1023 PPIKKAKEET--PKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDY 1080
Query: 1336 GR-MDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSI 1394
+ + +EK+ +KP E K NKG + K +E S + SK +
Sbjct: 1081 SKDVKSEKLTTKEEKAKKPNEKN--KPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEV 1138
Query: 1395 KAVIVSSPKAK-----ATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGL 1449
++ SPK K + +T + S P +I ++ K + T S
Sbjct: 1139 TEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKK----IGSTENISNT 1194
Query: 1450 AESSSKFKPTQSSL----TRGGSGR-ISALQGKLSKLDYRDITKQSQETEARPSIMKRDD 1504
E S K + T S + +G R ++ +G S L T + + R S K D
Sbjct: 1195 KEPSEKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDT 1254
Query: 1505 SNN--KTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLK 1562
KT+ E N N + P ++ D+F + +E ++ P +
Sbjct: 1255 KRTVIKTMEEYNNDNTAPAEDVIIMI-QVPQSKWDKDDFESEEEDVKSTQPISS-----V 1308
Query: 1563 GKRKETLKNVPFSELNLKKKKGKTSTP-RGVEGELSFVTLDEIGEEEDAAAHLAQALVTV 1621
GK +KNV N+ K K S P ++ V+ + I E ++ + A +
Sbjct: 1309 GKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKGK 1368
Query: 1622 DEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLV 1681
+ D L E K NS ++P+ + L EQ K
Sbjct: 1369 TKDRDYSVLEKENPEKRKNS----------------TQPEKESNLDRLNEQGNFKSLSQS 1412
Query: 1682 TVDEIGEVEELPLNESADITFATLN---TKGNEGDTVRDSIGFISSQVPEDPSTLVTVDE 1738
+ +E ++ D T A+ N T + T D+ + SS+ ++ + L +
Sbjct: 1413 S-------KEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKD 1465
Query: 1739 IQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSK 1798
+ D ++ EE + + K+ + + D + D K ++K
Sbjct: 1466 SPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETK 1525
Query: 1799 NDHPTDKKGNRKKRAVDTKKTKLES----LSQVGPVNENVMEEDLKTMIERHLTAKTPTK 1854
+ K +R+K ++ + K S L + P V +E + I++ + P
Sbjct: 1526 SVDKNPCK-DREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDK--STVKPKP 1582
Query: 1855 RVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASD 1914
++ L S+ T+ A E + +E D ES + E E ++D +
Sbjct: 1583 QLSHSSRLSSDLTRETDEAAFEPDY--NESDSESNVSVKEEESSGNISKDLKD--KIVEK 1638
Query: 1915 VPEELD-FLVPKAGF----------FCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQ 1963
E LD V + G P S SG + +H S ++ + K+
Sbjct: 1639 AKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQT-RSHSSSASSAESQDSKKKKK 1697
Query: 1964 RKEKEQNEAEERSSR 1978
+KEK++++ ++ +
Sbjct: 1698 KKEKKKHKKHKKHKK 1712
Score = 43.9 bits (102), Expect = 0.002
Identities = 97/416 (23%), Positives = 152/416 (36%), Gaps = 97/416 (23%)
Query: 1265 VEKNETVSE-ILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMD 1323
VE+N+T S +LPS T V P D +++ K++SEK D++E + K
Sbjct: 932 VEENKTDSLFVLPSRDDATPVRDEPM-DAESITFKSVSEK----DKRERDKPKAK----- 981
Query: 1324 LQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILA 1383
G + KN+G ++K + KPA+ G K D + S
Sbjct: 982 ---GDKTKRKNDGSAVSKKENIV-----KPAK------------GPQEKVDGERERS--- 1018
Query: 1384 VSDVSSSKPSIKAVIVSSPKAKATVSKTENQ----------KSFPKSVPRDQ----INAE 1429
S+P IK +PK T S + +Q K+ KS Q + E
Sbjct: 1019 ----PRSEPPIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEE 1074
Query: 1430 K------------KLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGK 1477
K KL+ KE KP L K K + + +G + K
Sbjct: 1075 KVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRK--RKTEEKGVDKDFESSSMK 1132
Query: 1478 LSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPK----STTGRSSKSKEEPL 1533
+SKL+ +I K S + + P K D + K + K TG+ S E
Sbjct: 1133 ISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTE--- 1189
Query: 1534 FPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNL-------------- 1579
N+ E +E + S+ KQ +KGK + + S L
Sbjct: 1190 ---NISNTKEPSEKLESTS-SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPV 1245
Query: 1580 KKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVTVDE-VIDEEELNMEE 1634
+K + KT T R V T++E + A A ++ V + D+++ EE
Sbjct: 1246 RKSEEKTDTKRTV-----IKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEE 1296
Score = 39.7 bits (91), Expect = 0.030
Identities = 107/614 (17%), Positives = 215/614 (35%), Gaps = 102/614 (16%)
Query: 94 QKKGKPHGSRWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNED 153
+K+ + + D+ S+S+ + + VT++ + SPK + D
Sbjct: 1111 EKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRK-----------------MEPD 1153
Query: 154 LEELSRYPDEQLTPENMPLILRDIRM-RKMGRRLPNLPSQSRNKE--------------- 197
E++ R P++ + P + I++ R+ G+++ + + S KE
Sbjct: 1154 TEKMDRTPEKDKISLSAP--AKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQE 1211
Query: 198 ---------TLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVENEFQSQQNI 248
G+E SS ++DY S G + P + E + +++ +
Sbjct: 1212 KVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGS-------------PVRKSEEKTDTKRTV 1258
Query: 249 SASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISGGQSVLEPI 308
++ N ++ P EDV + P + F S E K + +PI
Sbjct: 1259 IKTMEEYN--NDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKST-----------QPI 1305
Query: 309 KSVNQ--SINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSSNVHVGS 366
SV + S+ + VS S + P +P SE I ++ + HE + + S
Sbjct: 1306 SSVGKPASVIKNVSTKPSNIVKYPEKESEP--SEKIQKFTKD--VSHEIIQHEVKSSKNS 1361
Query: 367 RGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPH 426
S+K D + + K + + + +K L + ++ + S
Sbjct: 1362 ASSEKGKTKDRDYSV-----LEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEA 1416
Query: 427 LCS--LCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEIL-----PSRRNEGNRK 479
S + S KD+ +++ T ++ + D E+ PSR +
Sbjct: 1417 RTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASG 1476
Query: 480 ENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRS 539
+ PR P S+ R R P + ++ P + + + + R
Sbjct: 1477 QKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDRE 1536
Query: 540 RSPYRIRN--PFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHL 597
+ RN G+ + PE + + K+ + H + +
Sbjct: 1537 KHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTR 1596
Query: 598 EAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSD 657
E + P ++ S + SVK +S N+ SK+L+D + + K+ D
Sbjct: 1597 ETDEAAFEPDYN-ESDSESNVSVK---EEESSGNI--------SKDLKDKIVEKAKESLD 1644
Query: 658 KAVSLQRKLRKEQS 671
A +Q + + QS
Sbjct: 1645 TAAVVQVGISRNQS 1658
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 61.6 bits (148), Expect = 7e-09
Identities = 226/1161 (19%), Positives = 411/1161 (35%), Gaps = 191/1161 (16%)
Query: 471 SRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFI 530
S R+ + RS+S SP RR R RSRS H +R RSRSP
Sbjct: 709 STRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPP-----Y 763
Query: 531 SRYRSRSRSRSPYRIRNP-FRGSPK---------CFRSVSPE-RMSRRSVRSSDRKKALE 579
RY SRSRS +R ++P R P+ +R V P M RS D + E
Sbjct: 764 RRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFE 823
Query: 580 DVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKP-----------SVKPTSATKS 628
R E ++ E KG++ +P+ S+ + P + +
Sbjct: 824 KERYRE---WERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRR 880
Query: 629 DSNLGGHSIRCKS--------------KNLEDDTLSECKQ----VSDKAVSLQRKLRKEQ 670
+ +GG S R ++ N +D+T S+ K+ D + +K RK +
Sbjct: 881 EDYVGGQSHRSRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRR 940
Query: 671 SLHYGSVLLITELPEDGCTEEDVRKLFQPFG----KVNDVLIVPYRKEAY-LEMEFKEAI 725
L EL E RK +P G K + + ++P R +A + E +A
Sbjct: 941 KGEESEGFLNPELLETS------RKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAE 994
Query: 726 TAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVE 785
+ K + + K K+K V KK K K D + ++
Sbjct: 995 SITFKSVSEKDKRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPR 1054
Query: 786 IVTSTSAAKTGQAKASVAKVNKSTGK------------SASSVKSVVTVAVKGNKASIKT 833
AK K K + S+ K S S+ + T VK K
Sbjct: 1055 SEPPIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDY 1114
Query: 834 AKSGGKKSLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATE 893
+K + L K+ K + NKP+ + + E ++ ++ + LE TE
Sbjct: 1115 SKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTE 1174
Query: 894 ------NEPLNKETEEM----------------CVMLVSNLPNKGYSVEEVYDLAKPFGG 931
+ +TE+M + L K S E + + +P
Sbjct: 1175 IVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPSEK 1234
Query: 932 LKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQLSISMAPENMNIKDEEAIFI 991
L+ +K ++ RK + T L+D S S + K EE
Sbjct: 1235 LESTSSKVKQEKVKGKVRRKVTGTEGSSST----LVD--YTSTSSTGGSPVRKSEE---- 1284
Query: 992 TLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQFGKVDHHVFISNRN--KAILQ 1049
+ D + + + + + + P + + ++ + + K D F S K+
Sbjct: 1285 ----KTDTKRTVIKTMEEYNNDNTAPAEDV--IIMIQVPQSKWDKDDFESEEEDVKSTQP 1338
Query: 1050 LDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQIEHDPELEKESPGLKNSPID 1109
+ S S+ + P NI + PE + E +++K + + + I
Sbjct: 1339 ISSVGKPASVIKNVSTKPSNI------------VKYPEKESEPSEKIQKFTKDVSHE-II 1385
Query: 1110 ESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETLELET 1169
+ EV+++ +S S + + ++ ++ E +++ + E E + L
Sbjct: 1386 QHEVKSSKNSASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQ 1445
Query: 1170 QGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTALLPSDSV 1229
+E + ++ + S + FT N ++ +D + + S S
Sbjct: 1446 SSKEARTSDKHDSTRASSNKDFTPNRDK--------KTDYDTREY-----------SSSK 1486
Query: 1230 FAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPT 1289
+E+N ++SPS +D SG +KN+ E +P T
Sbjct: 1487 RRDEKNELTRRKDSPSRNKDSASG------------QKNKPREE--------RDLPKKGT 1526
Query: 1290 GDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAEKVEKMAAM 1349
GD K K N S + + ++TK + T+ +KN + + V +
Sbjct: 1527 GDSK---KSNSSPSRDRKPHDHKATYDTKRPNEE----TKSVDKNPCKDREKHVLEARNN 1579
Query: 1350 KEKPAENTLFKAYP-------NKGVGQANKPDETSKTSILAVSDVSS--SKPSIKAVI-- 1398
KE L+ P + GQ +K K + S +SS ++ + +A
Sbjct: 1580 KESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEP 1639
Query: 1399 ---VSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSK 1455
S ++ +V + E+ + K + +D+I + K S +++ +R+ + SS
Sbjct: 1640 DYNESDSESNVSVKEEESSGNISKDL-KDKIVEKAKESLDTAAVVQVGISRN-QSHSSPS 1697
Query: 1456 FKPTQS-----SLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTL 1510
P++S S TR S S+ + + SK + K+ + + K+ L
Sbjct: 1698 VSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVEL 1757
Query: 1511 AEQNTKNPKSTTGRSSKSKEE 1531
+ K + +K KE+
Sbjct: 1758 EKSQKHKHKKKKSKKNKDKEK 1778
Score = 60.8 bits (146), Expect = 1e-08
Identities = 187/965 (19%), Positives = 342/965 (35%), Gaps = 157/965 (16%)
Query: 466 PEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSS-SSHRFRRSRSPMHYMYRP------ 518
PE L S R+ N+K+N + + +P + + HR RR P
Sbjct: 899 PEKL-SARDGHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETS 957
Query: 519 -RSRSPRICHRFISRYRSRSRSRSPYRI-RNPFRGSPKCFRSVSPERMSRRSVRSSDRKK 576
+SR P + ++ S P R P R P S++ + +S + R D+ K
Sbjct: 958 RKSREPT----GVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPK 1013
Query: 577 ALEDVVQRSGHGTEFNKQKHL---------------EAADKGHSPAQKPKTSSGTKPSVK 621
A D +R G+ +K++++ E + + P +K K + + K
Sbjct: 1014 AKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTK 1073
Query: 622 PTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLIT 681
+S+++ D + G + SK+ ++ E K V ++ K++K+ S S L T
Sbjct: 1074 SSSSSQKDEKITGTPRKAHSKSAKEH--QETKPVKEE------KVKKDYSKDVKSEKLTT 1125
Query: 682 ELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRK--EAYLEMEFKEAITAIMKYIETTPLTI 739
+ EE +K + +++ RK E ++ +F+ + I K +E T +
Sbjct: 1126 K-------EEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISK-LEVTEIVK 1177
Query: 740 KGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQAK 799
P +K + E +T E K+S S A
Sbjct: 1178 PS-------PKRKMEPDTEKMDRTPEKDKISLS-------------------------AP 1205
Query: 800 ASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSNKPV 859
A K+N+ TGK S ++ + K + +S K + K G V+ K V
Sbjct: 1206 AKKIKLNRETGKKIGSTEN-----ISNTKEPSEKLESTSSKVKQEKVKGKVRRK-----V 1255
Query: 860 TIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEM---------CVMLVS 910
T E S T ++ +T + + + + + K EE V+++
Sbjct: 1256 TGTEGSS-STLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMI 1314
Query: 911 NLPNKGY-------------SVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMV 957
+P + S + + + KP +K++ S+ Y E + +E +
Sbjct: 1315 QVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQ 1374
Query: 958 KFYTCFP---VLMDGNQLSISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLD 1014
KF + + S + E KD + + L KEN + T ++ +LD
Sbjct: 1375 KFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRD--YSVLEKENPEKRKNSTQPEKESNLD 1432
Query: 1015 NLPEDGLQCVLCVGLQFGKVDHHVFISNRNKAILQLDSPES--AQSMYSFLKQNPQNIGD 1072
L E G + +S +K D +S A S F +
Sbjct: 1433 RLNEQG---------------NFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDY 1477
Query: 1073 HMLTCSLSPKIDLPE--VQIEHDPELEKES-PGLKNSPIDESEVQTATDSPSVKPNELEE 1129
S S + D + + P K+S G KN P +E ++ S K N
Sbjct: 1478 DTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPS 1537
Query: 1130 ESTPSIQTETLVQQEEPCEE--EAEKATCDSDFAVETLELETQGEEVKEEIPLVAS---A 1184
+ + P EE +K C D LE E ++ + +
Sbjct: 1538 RDRKPHDHKATYDTKRPNEETKSVDKNPC-KDREKHVLEARNNKESSGNKLLYILNPPET 1596
Query: 1185 SVSIEQFTENAEECALNQQMFNSDLEKKGAEII--NPKTALLPSDSVFAEERNLKGILEE 1242
V EQ T ++ + + S + +++ + A P + E N+ EE
Sbjct: 1597 QVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEE 1656
Query: 1243 S----PSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKK 1298
S + +D I + ++ A V+ + ++ S + P+G +
Sbjct: 1657 SSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSS 1716
Query: 1299 NI-------SEKKGNMDEKEEKEFNTKETRMDLQIGTE-KAEKNEGRMDAEKVEKMAAMK 1350
+ S+KK EK++ + + K + GTE + EK++ +K K K
Sbjct: 1717 SASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDK 1776
Query: 1351 EKPAE 1355
EK E
Sbjct: 1777 EKEKE 1781
Score = 54.7 bits (130), Expect = 9e-07
Identities = 147/735 (20%), Positives = 268/735 (36%), Gaps = 86/735 (11%)
Query: 1285 PGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNT---------KETRMDLQIGTEKAEKNE 1335
P I E+T K + K + +K+EK T KE + + EK +K+
Sbjct: 1057 PPIKKAKEET--PKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDY 1114
Query: 1336 GR-MDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSI 1394
+ + +EK+ +KP E K NKG + K +E S + SK +
Sbjct: 1115 SKDVKSEKLTTKEEKAKKPNEKN--KPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEV 1172
Query: 1395 KAVIVSSPKAK-----ATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGL 1449
++ SPK K + +T + S P +I ++ K + T S
Sbjct: 1173 TEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKK----IGSTENISNT 1228
Query: 1450 AESSSKFKPTQSSL----TRGGSGR-ISALQGKLSKLDYRDITKQSQETEARPSIMKRDD 1504
E S K + T S + +G R ++ +G S L T + + R S K D
Sbjct: 1229 KEPSEKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDT 1288
Query: 1505 SNN--KTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLK 1562
KT+ E N N + P ++ D+F + +E ++ P +
Sbjct: 1289 KRTVIKTMEEYNNDNTAPAEDVIIMI-QVPQSKWDKDDFESEEEDVKSTQPISS-----V 1342
Query: 1563 GKRKETLKNVPFSELNLKKKKGKTSTP-RGVEGELSFVTLDEIGEEEDAAAHLAQALVTV 1621
GK +KNV N+ K K S P ++ V+ + I E ++ + A +
Sbjct: 1343 GKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKGK 1402
Query: 1622 DEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLV 1681
+ D L E K NS ++P+ + L EQ K
Sbjct: 1403 TKDRDYSVLEKENPEKRKNS----------------TQPEKESNLDRLNEQGNFKSLSQS 1446
Query: 1682 TVDEIGEVEELPLNESADITFATLN---TKGNEGDTVRDSIGFISSQVPEDPSTLVTVDE 1738
+ +E ++ D T A+ N T + T D+ + SS+ ++ + L +
Sbjct: 1447 S-------KEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKD 1499
Query: 1739 IQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSK 1798
+ D ++ EE + + K+ + + D + D K ++K
Sbjct: 1500 SPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETK 1559
Query: 1799 NDHPTDKKGNRKKRAVDTKKTKLES----LSQVGPVNENVMEEDLKTMIERHLTAKTPTK 1854
+ K +R+K ++ + K S L + P V +E + I++ + P
Sbjct: 1560 SVDKNPCK-DREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDK--STVKPKP 1616
Query: 1855 RVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASD 1914
++ L S+ T+ A E + +E D ES + E E ++D +
Sbjct: 1617 QLSHSSRLSSDLTRETDEAAFEPDY--NESDSESNVSVKEEESSGNISKDLKD--KIVEK 1672
Query: 1915 VPEELD-FLVPKAGF----------FCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQ 1963
E LD V + G P S SG + +H S ++ + K+
Sbjct: 1673 AKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQT-RSHSSSASSAESQDSKKKKK 1731
Query: 1964 RKEKEQNEAEERSSR 1978
+KEK++++ ++ +
Sbjct: 1732 KKEKKKHKKHKKHKK 1746
Score = 43.9 bits (102), Expect = 0.002
Identities = 97/416 (23%), Positives = 152/416 (36%), Gaps = 97/416 (23%)
Query: 1265 VEKNETVSE-ILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMD 1323
VE+N+T S +LPS T V P D +++ K++SEK D++E + K
Sbjct: 966 VEENKTDSLFVLPSRDDATPVRDEPM-DAESITFKSVSEK----DKRERDKPKAK----- 1015
Query: 1324 LQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILA 1383
G + KN+G ++K + KPA+ G K D + S
Sbjct: 1016 ---GDKTKRKNDGSAVSKKENIV-----KPAK------------GPQEKVDGERERS--- 1052
Query: 1384 VSDVSSSKPSIKAVIVSSPKAKATVSKTENQ----------KSFPKSVPRDQ----INAE 1429
S+P IK +PK T S + +Q K+ KS Q + E
Sbjct: 1053 ----PRSEPPIKKAKEETPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETKPVKEE 1108
Query: 1430 K------------KLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGK 1477
K KL+ KE KP L K K + + +G + K
Sbjct: 1109 KVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRK--RKTEEKGVDKDFESSSMK 1166
Query: 1478 LSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPK----STTGRSSKSKEEPL 1533
+SKL+ +I K S + + P K D + K + K TG+ S E
Sbjct: 1167 ISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTE--- 1223
Query: 1534 FPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNL-------------- 1579
N+ E +E + S+ KQ +KGK + + S L
Sbjct: 1224 ---NISNTKEPSEKLESTS-SKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPV 1279
Query: 1580 KKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVTVDE-VIDEEELNMEE 1634
+K + KT T R V T++E + A A ++ V + D+++ EE
Sbjct: 1280 RKSEEKTDTKRTV-----IKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEE 1330
Score = 39.7 bits (91), Expect = 0.030
Identities = 107/614 (17%), Positives = 215/614 (35%), Gaps = 102/614 (16%)
Query: 94 QKKGKPHGSRWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNED 153
+K+ + + D+ S+S+ + + VT++ + SPK + D
Sbjct: 1145 EKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRK-----------------MEPD 1187
Query: 154 LEELSRYPDEQLTPENMPLILRDIRM-RKMGRRLPNLPSQSRNKE--------------- 197
E++ R P++ + P + I++ R+ G+++ + + S KE
Sbjct: 1188 TEKMDRTPEKDKISLSAP--AKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQE 1245
Query: 198 ---------TLGSEAVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVENEFQSQQNI 248
G+E SS ++DY S G + P + E + +++ +
Sbjct: 1246 KVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGS-------------PVRKSEEKTDTKRTV 1292
Query: 249 SASVPNPNVICNSMFPVEDVFRQMDFPGESSNNRSFFSVESGTKMSGLHISGGQSVLEPI 308
++ N ++ P EDV + P + F S E K + +PI
Sbjct: 1293 IKTMEEYN--NDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKST-----------QPI 1339
Query: 309 KSVNQ--SINQTVSQTMSQSLIPPSMNQQPFSSELISSVSQQERIPHEPVINSSNVHVGS 366
SV + S+ + VS S + P +P SE I ++ + HE + + S
Sbjct: 1340 SSVGKPASVIKNVSTKPSNIVKYPEKESEP--SEKIQKFTKD--VSHEIIQHEVKSSKNS 1395
Query: 367 RGSKKNYQSQADIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPH 426
S+K D + + K + + + +K L + ++ + S
Sbjct: 1396 ASSEKGKTKDRDYSV-----LEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEA 1450
Query: 427 LCS--LCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEIL-----PSRRNEGNRK 479
S + S KD+ +++ T ++ + D E+ PSR +
Sbjct: 1451 RTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASG 1510
Query: 480 ENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRS 539
+ PR P S+ R R P + ++ P + + + + R
Sbjct: 1511 QKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKSVDKNPCKDRE 1570
Query: 540 RSPYRIRN--PFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHL 597
+ RN G+ + PE + + K+ + H + +
Sbjct: 1571 KHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTR 1630
Query: 598 EAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSD 657
E + P ++ S + SVK +S N+ SK+L+D + + K+ D
Sbjct: 1631 ETDEAAFEPDYN-ESDSESNVSVK---EEESSGNI--------SKDLKDKIVEKAKESLD 1678
Query: 658 KAVSLQRKLRKEQS 671
A +Q + + QS
Sbjct: 1679 TAAVVQVGISRNQS 1692
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 61.6 bits (148), Expect = 7e-09
Identities = 61/202 (30%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 470 PSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRF 529
P+RR +R R RS +P+ RRSR S R RSRSP R RSR+P
Sbjct: 599 PTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTP------ 652
Query: 530 ISRYRSRSRSRSP-----YRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQR 584
R RSRSR+P R R P R S + RS +P R R R+ R ++ + R
Sbjct: 653 --ARRGRSRSRTPARRGRSRSRTPARRSGRS-RSRTPARRGRSRSRTPRRGRSRSRSLVR 709
Query: 585 SGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNL 644
G Q+ +G S SS + + TS +S SN + + +
Sbjct: 710 RGRSHSRTPQR------RGRS------GSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757
Query: 645 EDDTLSECKQVSDKAVSLQRKL 666
+LS + + +SL+R L
Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSL 779
Score = 52.0 bits (123), Expect = 6e-06
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 478 RKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
+K+ + RRS S SPRR R+ SS + RS S + + RSP + S+ + R
Sbjct: 190 KKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESK---KRKHRSPTPKSKRKSKDKKRK 246
Query: 538 RSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHL 597
RSRS P S + RS S + S SSD ++ H T +
Sbjct: 247 RSRS----TTPAPKSRRAHRSTSAD-----SASSSDTSRSRSRSAAAKTHTTALAGRSPS 297
Query: 598 EAADK---GHSPAQKPKTSSGTKPSVKPTSATKSDSN 631
A+ + G +P +P T+S +PS P +ATK S+
Sbjct: 298 PASGRRGEGDAPFSEPGTTSTQRPS-SPETATKQPSS 333
Score = 50.4 bits (119), Expect = 2e-05
Identities = 58/195 (29%), Positives = 76/195 (38%), Gaps = 29/195 (14%)
Query: 458 RQQYPDWNPEILPSRRNEGNRK--ENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYM 515
R + P W RR+ ++ + +P+RR S SP+R S S + RR RS
Sbjct: 507 RSRSPQW-------RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARR 559
Query: 516 YRPRSRSPRICHRFISR-------------YRSRSRSRSPYRIRNPFRGSPKCFRSVSPE 562
R SRSP R SR R RSRSR+P R R+ R + RS S
Sbjct: 560 GRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRT 619
Query: 563 RMSRRS-------VRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSG 615
RRS RS R A RS + + A +G S ++ P SG
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679
Query: 616 TKPSVKPTSATKSDS 630
S P +S S
Sbjct: 680 RSRSRTPARRGRSRS 694
Score = 49.7 bits (117), Expect = 3e-05
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 478 RKENETPRRRSHSPSPRRS-RRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISR-YRS 535
R + TP +R HS S RRS S+ R+ RSRSP R RSRSP+ SR +
Sbjct: 494 RSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQR---RGRSRSPQRPGWSRSRNTQR 550
Query: 536 RSRSRSPYRIRNPFRGSPKC---FRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFN 592
R RSRS R R+ R SP RS +P R R R+ R+++ R
Sbjct: 551 RGRSRSARRGRSHSR-SPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTR-------R 602
Query: 593 KQKHLEAADKGHSPAQKP-KTSSGTKPSVKPTSATKSDSNLGGHS 636
+ + A +G S ++ P + S T+ V+ S ++S + G S
Sbjct: 603 RSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
Score = 49.7 bits (117), Expect = 3e-05
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 17/108 (15%)
Query: 471 SRRNEGNRKENETPRRRSHS---PSP---RRSRRSSSSHRFRRSRSPMHYMYRPRSR-SP 523
SRR G + T R+RS S P+P RSR S ++HR RSR+P+ R RSR SP
Sbjct: 1835 SRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSP 1894
Query: 524 RICHRFISRYRSRSRSRSPYRIRNPFRGSP---KCFRSVSPERMSRRS 568
+SR RSRSR+ S R R+ R SP + RS +P RRS
Sbjct: 1895 ------VSRRRSRSRT-SVTRRRSRSRASPVSRRRSRSRTPPVTRRRS 1935
Score = 48.1 bits (113), Expect = 8e-05
Identities = 52/137 (37%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 471 SRRNEGNRKENETPRRRSHSPSP---RRSRRSSSSHRFRRSRSPMHYMYRPRSRS---PR 524
+RR +R T RR SP RRSR +S RRSRS + R RSRS P
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 2025
Query: 525 ICHRFISRY----RSRSRSRSPYRIRNPFRG-SPKCFRSV-----SPERMSRRSVR--SS 572
I R SR R RSRSRSP IR R +P+ R SP + RRS SS
Sbjct: 2026 IRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSS 2085
Query: 573 DRKKALEDVVQRSGHGT 589
DR ++ R+ G+
Sbjct: 2086 DRSRSATPPATRNHSGS 2102
Score = 45.8 bits (107), Expect = 4e-04
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 465 NPEIL-PSRRNEGNRKENETPRRRSHSP----------SPRRSRRSSSSHRFRRSRSPMH 513
+PE+ +R + +R + +P RS +P SP + +S SS R R + SP
Sbjct: 1694 SPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRT 1753
Query: 514 YMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSD 573
R RSP R + R RSRSR R R + + RS S + SRR RS
Sbjct: 1754 KTTSRRGRSPSPKPRGLQRSRSRSR-------REKTRTTRRRDRSGSSQSTSRRRQRSRS 1806
Query: 574 RKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKS 628
R + V +R G+ ++ + + + +++ + S T P+ + S +++
Sbjct: 1807 RSR----VTRRRRGGSGYHSRSPAR-QESSRTSSRRRRGRSRTPPTSRKRSRSRT 1856
Score = 45.1 bits (105), Expect = 7e-04
Identities = 57/220 (25%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 444 HQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRS---HSPSPRRSRRSS 500
H ++S H +++ P I + NE ++ TP+RRS SP P R+
Sbjct: 835 HSSSSPH----PKVKSGTPPRQGSITSPQANE----QSVTPQRRSCFESSPDPELKSRTP 886
Query: 501 SSH--------RFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGS 552
S H R + S P R S P++ R RS S S SP R R +
Sbjct: 887 SRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTT 946
Query: 553 PKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKT 612
P+ RSVSP S+ + L SG + K K + HS + P
Sbjct: 947 PRRSRSVSP---------CSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISP-- 995
Query: 613 SSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSEC 652
P VK + T +L G C + +D + C
Sbjct: 996 ----YPKVK--AQTPPGPSLSGSKSPCPQEKSKDSLVQSC 1029
Score = 44.7 bits (104), Expect = 0.001
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 22/188 (11%)
Query: 462 PDWNPEILPSRRNEGNRKENET-----PRRRSHSPSPRRSRRSSSSHRFR--------RS 508
P+ P+ +RR + E +T PRRRS SP +R++ S R R RS
Sbjct: 1659 PEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS 1718
Query: 509 RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRS 568
R+P + P SP + S R RS S SP RG RS SP+ +
Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSRRRRSAS-SPRTKTTSRRG-----RSPSPKPRGLQR 1772
Query: 569 VRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSG---TKPSVKPTSA 625
RS R++ +R G+ + + + + ++ + SG P+ + +S
Sbjct: 1773 SRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSR 1832
Query: 626 TKSDSNLG 633
T S G
Sbjct: 1833 TSSRRRRG 1840
Score = 42.0 bits (97), Expect = 0.006
Identities = 62/210 (29%), Positives = 84/210 (40%), Gaps = 38/210 (18%)
Query: 469 LPSRRNEGNRKENETPRRRSHSPSP-----RRSRRSSSSHRFRRSRSPMHYMYRPRSRSP 523
L SRR +R + RRRS S + RSR S S R RSR+P R RSR+P
Sbjct: 1882 LISRRRSRSRT-SPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP 1940
Query: 524 RICHRFISR----YRSRSRSRSP--------------YRIRNPFRGSPKCFR----SVSP 561
R SR R RSRSR+P R R+ R SP R SP
Sbjct: 1941 TTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSP 2000
Query: 562 ERMSRRSVRSS------DRKKALEDVVQRSGHGTEFNKQKHLEA----ADKGHSPAQKPK 611
R R+S R + + +RS T +K + A + S ++ P+
Sbjct: 2001 VTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPR 2060
Query: 612 TSSGTKPSVKPTSATKSDSNLGGHSIRCKS 641
T+ G + + A + S G S R +S
Sbjct: 2061 TARGKRSLTRSPPAIRRRSASGSSSDRSRS 2090
Score = 41.6 bits (96), Expect = 0.008
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 33/196 (16%)
Query: 458 RQQYPDWNPEILPSRRNEGN-----------RKENETPRRRSHSPSPRRSRRSSSSH--- 503
R + P +PE LP + + R + +P +P+P R SSS
Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSK 460
Query: 504 -----RFRRSRSPMHYMYRP--RSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCF 556
R +R +S H R RSRSP R RSRSR+P + + SP+
Sbjct: 461 NRSHGRAKRDKSHSHTPSRRMGRSRSPATAKR------GRSRSRTPTKRGHSRSRSPQWR 514
Query: 557 RSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQK--HLEAADKGHSPAQKPKTSS 614
RS S +R R S +++ QR G N Q+ +A +G S ++ P T
Sbjct: 515 RSRSAQRWGR---SRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPAT-R 570
Query: 615 GTKPSVKPTSATKSDS 630
G S P +S S
Sbjct: 571 GRSRSRTPARRGRSRS 586
Score = 37.7 bits (86), Expect = 0.11
Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 471 SRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFI 530
S + + +R E+E+ +R+ SP+P+ R+S R +RSRS R+
Sbjct: 212 SSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKR-KRSRSTTPAPKSRRAHRSTSADSAS 270
Query: 531 SRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTE 590
S SRSRSRS + + RS SP RR + + QR
Sbjct: 271 SSDTSRSRSRSAAAKTHT---TALAGRSPSP-ASGRRGEGDAPFSEPGTTSTQRPSSPET 326
Query: 591 FNKQKHLEAADKGHSPAQKPKTSSGTKPSVKP 622
KQ DK +K S T+PS P
Sbjct: 327 ATKQPSSPYEDKDKDKKEK----SATRPSPSP 354
Score = 37.4 bits (85), Expect = 0.15
Identities = 48/177 (27%), Positives = 63/177 (35%), Gaps = 42/177 (23%)
Query: 466 PEILPSRRNEGNRKENETPRRRS---------HSPSPRRSRRSSSSHRFRRSRSPMHYMY 516
P LP R G+ + P H P R +RR S S +++S
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688
Query: 517 RPRSRSPRICHRFISRYRSRSRSRSP-YRIRNP--FRGSPKCFRSVSPERMSRRSVRSSD 573
R SP + + RSRS S SP R R P R SP SVS + +S RSS
Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP----SVSSPEPAEKS-RSSR 1743
Query: 574 RKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDS 630
R+++ SP K + G PS KP +S S
Sbjct: 1744 RRRS-------------------------ASSPRTKTTSRRGRSPSPKPRGLQRSRS 1775
Score = 36.2 bits (82), Expect = 0.33
Identities = 54/216 (25%), Positives = 82/216 (37%), Gaps = 26/216 (12%)
Query: 471 SRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFI 530
SR ++ + N +P + S RRSR SS +SR + S P+ +
Sbjct: 734 SRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTP 793
Query: 531 SRYRSRS-------RSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQ 583
R RSRS +SR+P R P +S +P R S S SS K
Sbjct: 794 PR-RSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS--SSPHPKVKSGTPP 850
Query: 584 RSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHS---IRCK 640
R G T +A ++ +P ++ S P +K S T S + G S ++
Sbjct: 851 RQGSITS------PQANEQSVTPQRRSCFESSPDPELK--SRTPSRHSCSGSSPPRVKSS 902
Query: 641 SKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGS 676
+ + + S Q KA+ + Q H GS
Sbjct: 903 TPPRQSPSRSSSPQPKVKAI-----ISPRQRSHSGS 933
Score = 36.2 bits (82), Expect = 0.33
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 14/217 (6%)
Query: 462 PDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHR-FRRSRSPMHYMYRPRS 520
P+ N + L +R + + + + +P +RSR SS + S SP S
Sbjct: 1503 PELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSS 1562
Query: 521 RSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRS-VSPE-----RMSRRSVRSSDR 574
+ R + R RSRS S + + R SP+ RS SPE R + R+ SD
Sbjct: 1563 PDSKAKTR--TPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDS 1620
Query: 575 KKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGG 634
+ R+ ++ ++ KG P+ + +S+ + P P S T +
Sbjct: 1621 SPEPKAPAPRA-----LPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSS 1675
Query: 635 HSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQS 671
+ KS+ S + L R+ R S
Sbjct: 1676 PEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASS 1712
Score = 34.3 bits (77), Expect = 1.2
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 21/182 (11%)
Query: 479 KENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSR-SPRICHRFISRYRSRS 537
K + +P+ RS S S S+ + + +RSRS +SR SPR RS
Sbjct: 1548 KPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR-----------RS 1596
Query: 538 RSRSPYRIRNPFRGSPKCF---------RSVSPERMSRRSVRSSDRKKALEDVVQRSGHG 588
RS S +++ R +P+ ++ +P + RRS S K S
Sbjct: 1597 RSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656
Query: 589 TEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDT 648
+ A +G + +PKT S T P + + ++ + S R +S + +T
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPET 1716
Query: 649 LS 650
S
Sbjct: 1717 RS 1718
Score = 33.9 bits (76), Expect = 1.6
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 26/181 (14%)
Query: 470 PSRRNEGNRKENETPRRRSHSPSP---------------RRSRRSSSSHRFRRSRSPMHY 514
P+ + + RRS S +P RR RS +S RRSRS
Sbjct: 1858 PAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASP 1917
Query: 515 MYRPRSRS---PRICHRFISR---YRSRSRSRSPYRIRNPFRG-SPKCFRSVSPERMSRR 567
+ R RSRS P R SR R RSRSR+P R R +P R S R S
Sbjct: 1918 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 1977
Query: 568 SVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATK 627
+ R S R + +RS T ++ + SP + ++ S T P+++ S ++
Sbjct: 1978 TRRRS-RSRTSPVTRRRSRSRTSPVTRRRSRSRT---SPVTRRRSRSRTPPAIRRRSRSR 2033
Query: 628 S 628
+
Sbjct: 2034 T 2034
Score = 33.1 bits (74), Expect = 2.8
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 30/249 (12%)
Query: 1365 KGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSSPK---AKATVSKTENQKSFPKSV 1421
KG Q + PD S TS V S PS+++ +SPK ++++ TE P
Sbjct: 1058 KGQSQTS-PDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQ 1116
Query: 1422 PRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQG--KLS 1479
R + +A L + + P +R +S S PT S + G R+ + K++
Sbjct: 1117 DRGEFSASPMLKSG----MSPEQSR---FQSDSSSYPTVDSNSLLGQSRLETAESKEKMA 1169
Query: 1480 KLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNT----KNPKSTTGRSSKSKEE-PLF 1534
D T + + S D +L ++T +S G S ++KE+
Sbjct: 1170 LPPQEDATASPPRQKDKFSPFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSAL 1229
Query: 1535 PFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEG 1594
P + + +E++E V S+ + LK + S S+P E
Sbjct: 1230 PTSSQD----EELMEVVEKSEEPAGQILSHLSSELKEMSTSNFE--------SSPEVEER 1277
Query: 1595 ELSFVTLDE 1603
+TLD+
Sbjct: 1278 PAVSLTLDQ 1286
Score = 32.3 bits (72), Expect = 4.7
Identities = 43/136 (31%), Positives = 53/136 (38%), Gaps = 30/136 (22%)
Query: 466 PEILPSRR--------NEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYR 517
PE P++R + + + + S S S S SSSS S SP
Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPG 2655
Query: 518 P-----------------RSRSPRICHRFISRYR-SRSRSRSPYRIRNPF-RGSPKCFRS 558
P RSRSPR + I R SRS S SP R P + SP+ +S
Sbjct: 2656 PQALPKPASPKKPPPGERRSRSPR---KPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQS 2712
Query: 559 VSPERMSRRSVRSSDR 574
S ER SRR R R
Sbjct: 2713 SSSERGSRRGQRGDSR 2728
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 61.2 bits (147), Expect = 9e-09
Identities = 104/437 (23%), Positives = 183/437 (41%), Gaps = 69/437 (15%)
Query: 468 ILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICH 527
I PSRR+ + + TP RRS +PS RRSR S RRSR+P RSR+P
Sbjct: 1951 ISPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPS-----RRSRTPSR-----RSRTPSRRR 1999
Query: 528 RFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGH 587
R S R RS S SP R+R R R S + R+ RSS+R ++ + +
Sbjct: 2000 RSRSVVRRRSFSISPVRLR---RSRTPLRRRFSRSPIRRKRSRSSERGRSPKRL------ 2050
Query: 588 GTEFNKQKHLEAADKGHSPAQKPKTS----SGTKPSVKPTSATKSDSNLGGHSIRCKSKN 643
T+ +K + LE A K ++ A K KP+ PT K GG +I
Sbjct: 2051 -TDLDKAQLLEIA-KANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATI------ 2102
Query: 644 LEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITELPEDGCTEEDVRKLFQP---F 700
++ +CKQ++ +++ + + E E+ KL +P F
Sbjct: 2103 --EELTEKCKQIAQS--------KEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIF 2152
Query: 701 GKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVK 760
+N P ++ + + + +++ ++ + ++ G+ V + G++ + V
Sbjct: 2153 FNLNIAAAKPTPPKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVF 2212
Query: 761 KKTLESKKVSAST------LKRDADASKAVEIVTSTSAAKTGQAKASVAKVN----KSTG 810
L S+ V ST L + + A ++ + + + + A++N + TG
Sbjct: 2213 SSNLPSEPVDISTAMSERALAQKRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTG 2272
Query: 811 KSASSVKSVVTVAVKGNKASIKTAK-------SGGKKSLEAKK------TGNVKNKDSNK 857
+ V + +A G +A IK + +GG ++ +K G KNK+ NK
Sbjct: 2273 STGVQVLTQEQLANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNK 2332
Query: 858 -PVTIPENSEIKTSIEV 873
P+ + ++ K + V
Sbjct: 2333 EPILVDFKTDRKGLVAV 2349
Score = 54.7 bits (130), Expect = 9e-07
Identities = 117/569 (20%), Positives = 222/569 (39%), Gaps = 71/569 (12%)
Query: 108 PHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTP 167
P + +V+V Q S+ V+E S VQ S ++ S E+ P E +
Sbjct: 1418 PVLEPAVSVLQPSMI-VSEPSVSVQESTVTVSEPAVTVS--------EQTQVIPTE-VAI 1467
Query: 168 ENMPLILRDIRMRKMGRRLPNLPSQSRN-KETLGSEAVSSNVIDYGHASKYGYTEDPLEV 226
E+ P+IL M + NL S +N +G + ++ H+ + + E+ L+
Sbjct: 1468 ESTPMILESSIMSSHVMKGINLSSGDQNLAPEIGMQEIAL------HSGEEPHAEEHLKG 1521
Query: 227 RIYDPEIPTDEVENEFQSQQNISASVPNPNVICNS-MFPVEDVFRQMDFPGESSNNRSFF 285
Y+ E + + ++ A N +C + PV ++ + P + R+
Sbjct: 1522 DFYESE---HGINIDLNINNHLIAKEMEHNTVCAAGTSPVGEIGEEKILPTSETKQRTVL 1578
Query: 286 SVESGTKMSGLH---ISGGQSVLEP-IKSVNQSINQTVSQTMS---QSLIPPSMNQQPFS 338
G + S G LEP ++ I T + T+S + + S+ Q
Sbjct: 1579 DTYPGVSEADAGETLSSTGPFALEPDATGTSKGIEFTTASTLSLVNKYDVDLSLTTQDTE 1638
Query: 339 SELISSVSQQ--ERIPHEPVINSSNVHVG--SRGSKKNYQSQADIPIRSPFGIVKASWLP 394
+++ S S E + + ++H+ S + + ++ +P++ + A P
Sbjct: 1639 HDMVISTSPSGGSEADIEGPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAALLSP 1698
Query: 395 KFSHADAQKMKRLPTPSMMNDYYAAS--------------PRIFPHLCSL-CNVECSHLK 439
K S +++ P ++ + ++A+ P+ L SL +E L
Sbjct: 1699 KESSGGEKEVPPPPKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGPLLA 1758
Query: 440 DWIQHQNTSTH----------IESCRQLRQQYPDW---NPEILPSRRNEGNRKENETPRR 486
+ ++ ES + + Y + S++N+ NR + E ++
Sbjct: 1759 SDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNK-NRDKGEKEKK 1817
Query: 487 RSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS-RSRSPYRI 545
R S R R SS H+ R+ S R RS + HR +R RSRS R R R
Sbjct: 1818 RDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSK-SHRSQTRSRSRSRRRRRSSRS 1876
Query: 546 RNPFRGSPKCFRSVSPERMSRR-SVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGH 604
R+ RG RSVS E+ R RS R++ + R T + + + H
Sbjct: 1877 RSKSRGR----RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSH 1932
Query: 605 SPAQKPKTSSGTKP---SVKPTSATKSDS 630
+P+++ ++ S + S+ P+ +++ S
Sbjct: 1933 TPSRRRRSRSVGRRRSFSISPSRRSRTPS 1961
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 61.2 bits (147), Expect = 9e-09
Identities = 49/113 (43%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 472 RRNEGNRKENETPRR-RSHSPSPRRSRRSSSSHRFRRSRS-PMHYMYRPRSRSPRICHRF 529
RR E R+E E RR RSHS +P+RSR S HR RSRS R RS+S HR
Sbjct: 246 RREEREREEREKLRRSRSHSKNPKRSR--SREHRRHRSRSMSRERKRRTRSKSREKRHRH 303
Query: 530 ISRYRSRSRSRSPYRIRNPF--RGSPKCFRSVSPERMSRRSVRSSDRKKALED 580
SR SRSRSRS R R+ R + R S ER + + S DR ++ D
Sbjct: 304 RSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRD 356
Score = 34.7 bits (78), Expect = 0.95
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 19/105 (18%)
Query: 485 RRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYR 544
+R R R + RRSRS S++P+ RSRSR +R
Sbjct: 238 KRNQERLKRREEREREEREKLRRSRS--------HSKNPK---------RSRSREHRRHR 280
Query: 545 IRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGT 589
R+ R + RS S E+ R RSS R ++ QRS H +
Sbjct: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH--QRSRHSS 323
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 60.5 bits (145), Expect = 2e-08
Identities = 67/203 (33%), Positives = 92/203 (45%), Gaps = 34/203 (16%)
Query: 468 ILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICH 527
I PSRR+ + + TP RRS +PS RRSR S RRSR+P RSR+P
Sbjct: 1951 ISPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPS-----RRSRTPSR-----RSRTPSRRR 1999
Query: 528 RFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGH 587
R S R RS S SP R+R R R S + R+ RSS+R ++ + +
Sbjct: 2000 RSRSVVRRRSFSISPVRLR---RSRTPLRRRFSRSPIRRKRSRSSERGRSPKRL------ 2050
Query: 588 GTEFNKQKHLEAADKGHSPAQKPKTS----SGTKPSVKPTSATKSDSNLGGHSI-----R 638
T+ +K + LE A K ++ A K KP+ PT K GG +I +
Sbjct: 2051 -TDLDKAQLLEIA-KANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEK 2108
Query: 639 CK---SKNLEDDTLSECKQVSDK 658
CK +DD + VSD+
Sbjct: 2109 CKQIAQSKEDDDVIVNKPHVSDE 2131
Score = 54.7 bits (130), Expect = 9e-07
Identities = 117/569 (20%), Positives = 222/569 (39%), Gaps = 71/569 (12%)
Query: 108 PHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTP 167
P + +V+V Q S+ V+E S VQ S ++ S E+ P E +
Sbjct: 1418 PVLEPAVSVLQPSMI-VSEPSVSVQESTVTVSEPAVTVS--------EQTQVIPTE-VAI 1467
Query: 168 ENMPLILRDIRMRKMGRRLPNLPSQSRN-KETLGSEAVSSNVIDYGHASKYGYTEDPLEV 226
E+ P+IL M + NL S +N +G + ++ H+ + + E+ L+
Sbjct: 1468 ESTPMILESSIMSSHVMKGINLSSGDQNLAPEIGMQEIAL------HSGEEPHAEEHLKG 1521
Query: 227 RIYDPEIPTDEVENEFQSQQNISASVPNPNVICNS-MFPVEDVFRQMDFPGESSNNRSFF 285
Y+ E + + ++ A N +C + PV ++ + P + R+
Sbjct: 1522 DFYESE---HGINIDLNINNHLIAKEMEHNTVCAAGTSPVGEIGEEKILPTSETKQRTVL 1578
Query: 286 SVESGTKMSGLH---ISGGQSVLEP-IKSVNQSINQTVSQTMS---QSLIPPSMNQQPFS 338
G + S G LEP ++ I T + T+S + + S+ Q
Sbjct: 1579 DTYPGVSEADAGETLSSTGPFALEPDATGTSKGIEFTTASTLSLVNKYDVDLSLTTQDTE 1638
Query: 339 SELISSVSQQ--ERIPHEPVINSSNVHVG--SRGSKKNYQSQADIPIRSPFGIVKASWLP 394
+++ S S E + + ++H+ S + + ++ +P++ + A P
Sbjct: 1639 HDMVISTSPSGGSEADIEGPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAALLSP 1698
Query: 395 KFSHADAQKMKRLPTPSMMNDYYAAS--------------PRIFPHLCSL-CNVECSHLK 439
K S +++ P ++ + ++A+ P+ L SL +E L
Sbjct: 1699 KESSGGEKEVPPPPKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGPLLA 1758
Query: 440 DWIQHQNTSTH----------IESCRQLRQQYPDW---NPEILPSRRNEGNRKENETPRR 486
+ ++ ES + + Y + S++N+ NR + E ++
Sbjct: 1759 SDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNK-NRDKGEKEKK 1817
Query: 487 RSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS-RSRSPYRI 545
R S R R SS H+ R+ S R RS + HR +R RSRS R R R
Sbjct: 1818 RDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSK-SHRSQTRSRSRSRRRRRSSRS 1876
Query: 546 RNPFRGSPKCFRSVSPERMSRR-SVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGH 604
R+ RG RSVS E+ R RS R++ + R T + + + H
Sbjct: 1877 RSKSRGR----RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSH 1932
Query: 605 SPAQKPKTSSGTKP---SVKPTSATKSDS 630
+P+++ ++ S + S+ P+ +++ S
Sbjct: 1933 TPSRRRRSRSVGRRRSFSISPSRRSRTPS 1961
>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
Length = 1227
Score = 58.5 bits (140), Expect = 6e-08
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 675 GSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIET 734
G V+ I LPE CTE DV L PFGKV + +++ +A+LEM + EA A+++Y +
Sbjct: 517 GRVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQAMVQYYQE 576
Query: 735 TPLTIKGKSVKICVPGKKKAQNKEVKK 761
I G+ K+ + K+ + ++KK
Sbjct: 577 KSAVINGE--KLLIRMSKRYKELQLKK 601
Score = 56.2 bits (134), Expect = 3e-07
Identities = 117/573 (20%), Positives = 223/573 (38%), Gaps = 101/573 (17%)
Query: 1413 NQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRIS 1472
++K P+ + + +++ E+ + P S L S S +K + R
Sbjct: 710 DRKHHPRQLDKAELD-ERPEGGRPHREKYPRSGSPNLPHSVSSYKSREDGYYR------- 761
Query: 1473 ALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEP 1532
K K + KQ Q+ R ++D++ L E +P + KE+
Sbjct: 762 ----KEPKAKWDKYLKQQQDAPGRSR--RKDEAR---LRESRHPHPDDS------GKEDG 806
Query: 1533 LFPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKN-----------VPFSELNLKK 1581
L P +V ++AKQN K K K T ++ + +E ++
Sbjct: 807 LGP----------KVTRAPEGAKAKQNE-KNKTKRTDRDQEGADDRKENTMAENEAGKEE 855
Query: 1582 KKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVTVDEVIDEE--ELNMEEMVKNS 1639
++G +P+ V + E + E+ Q + E E NMEE+V
Sbjct: 856 QEGMEESPQSVGRQEKEA---EFSDPENTRTKKEQDWESESEAEGESWYPTNMEELV--- 909
Query: 1640 NSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESAD 1699
T+DE+ +++D I + ++ + +++D + E + V L L+ + D
Sbjct: 910 ----TVDEVGEEEDFIVEPDIPELEEIVPIDQKDKICPETCLCV-----TTTLDLDLAQD 960
Query: 1700 ITFATLNTKGNEGDTVRDSIGFISSQVPED-PSTLVTVDEIQD-DSSDLHLVTLDEVTEE 1757
+ GN IS + P + PS + D + L+L + E
Sbjct: 961 FPKEGVKAVGN-------GAAEISLKSPRELPSASTSCPSDMDVEMPGLNLDAERKPAES 1013
Query: 1758 DED-SLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDT 1816
+ SL D + ++E V E D + Q + P +++ + VD
Sbjct: 1014 ETGLSLEDSDCYEKEAKGV--------ESSDVHPAPTVQQMSSPKPAEERARQPSPFVDD 1065
Query: 1817 KKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGE 1876
KT+ + G + +EE IE L + ++ + E ++
Sbjct: 1066 CKTR--GTPEDGACEGSPLEEKASPPIETDLQNQA------------CQEVLTPENSRYV 1111
Query: 1877 EAFQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASD--VPEELDFLVPKAGFFCPICS 1934
E + E +E E K+ + S + V S+ +P ++F+VP+ GF+C +C
Sbjct: 1112 EMKSLEVRSPEY----TEVELKQPLSLPSWEPEDVFSELSIPLGVEFVVPRTGFYCKLCG 1167
Query: 1935 LFYSGEK-AMTNHCKSTRHKQNTEKFMAKQRKE 1966
LFY+ E+ A +HC+S H +N +K++++ +E
Sbjct: 1168 LFYTSEETAKMSHCRSAVHYRNLQKYLSQLAEE 1200
Score = 44.3 bits (103), Expect = 0.001
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 1009 RFVHLDNLPEDGL--QCVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQN 1066
R VH+ NLPE V+ +GL FGKV +++ + + N+A L++ E+AQ+M + ++
Sbjct: 518 RVVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQAMVQYYQEK 577
Query: 1067 PQNIGDHMLTCSLSPK 1082
I L +S +
Sbjct: 578 SAVINGEKLLIRMSKR 593
Score = 43.5 bits (101), Expect = 0.002
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 413 MNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTHIESC 454
+ND++ +P PH+CS+C+ + LKDW H H + C
Sbjct: 399 LNDFHGVAPLHLPHICSICDKKVFDLKDWELHVKGKLHAQKC 440
Score = 40.8 bits (94), Expect = 0.013
Identities = 21/73 (28%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 906 VMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEI-NRKAAESMVKFYTCFP 964
V+ + NLP + +V +L PFG + + +++ S +A++E+ +AA++MV++Y
Sbjct: 519 VVHICNLPEGSCTENDVINLGLPFGKVTNYILMKSTNQAFLEMAYTEAAQAMVQYYQEKS 578
Query: 965 VLMDGNQLSISMA 977
+++G +L I M+
Sbjct: 579 AVINGEKLLIRMS 591
Score = 39.7 bits (91), Expect = 0.030
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 1387 VSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKL------SAKEFGL- 1439
VSS K PKAK + Q + +S +D+ + S KE GL
Sbjct: 749 VSSYKSREDGYYRKEPKAKWDKYLKQQQDAPGRSRRKDEARLRESRHPHPDDSGKEDGLG 808
Query: 1440 LKPTSARSGL-AESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQE-TEARP 1497
K T A G A+ + K K ++ + G+ K + + + K+ QE E P
Sbjct: 809 PKVTRAPEGAKAKQNEKNKTKRTDRDQEGAD-----DRKENTMAENEAGKEEQEGMEESP 863
Query: 1498 SIMKRDDSNNKTLAEQNTKNPKSTTGRS-SKSKEEPLFPFNLDEFVTVDEVIEE 1550
+ R + + +NT+ K S S+++ E +P N++E VTVDEV EE
Sbjct: 864 QSVGRQEKEAEFSDPENTRTKKEQDWESESEAEGESWYPTNMEELVTVDEVGEE 917
Score = 32.7 bits (73), Expect = 3.6
Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 7/164 (4%)
Query: 1062 FLKQNPQNIGDHMLTCSLSPKIDLPEVQIEHDPELEKESPGL----KNSPIDESEVQTAT 1117
F K+ + +G+ SL +LP +++ E PGL + P ESE +
Sbjct: 961 FPKEGVKAVGNGAAEISLKSPRELPSASTSCPSDMDVEMPGLNLDAERKPA-ESETGLSL 1019
Query: 1118 DSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEE 1177
+ E + + + VQQ + E+A S F + T + E
Sbjct: 1020 EDSDCYEKEAKGVESSDVHPAPTVQQMSSPKPAEERARQPSPFVDDCKTRGTPEDGACEG 1079
Query: 1178 IPLVASASVSIEQFTENAEECALNQQMFNSD-LEKKGAEIINPK 1220
PL AS IE +N + C NS +E K E+ +P+
Sbjct: 1080 SPLEEKASPPIETDLQN-QACQEVLTPENSRYVEMKSLEVRSPE 1122
>gi|109637759 calpastatin isoform f [Homo sapiens]
Length = 750
Score = 57.8 bits (138), Expect = 1e-07
Identities = 138/672 (20%), Positives = 265/672 (39%), Gaps = 58/672 (8%)
Query: 1292 EKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAEKVEKMAAMKE 1351
EKT + + +K DEK+ + ++ GT A K A K ++M
Sbjct: 29 EKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGTASATKVSASSGA--TSKSSSMN- 85
Query: 1352 KPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSSPKAKATVSKT 1411
P E K P K Q+ KP K + S+ + +K ++ P K+T
Sbjct: 86 -PTETKAVKTEPEKK-SQSTKPKSLPKQASDTGSNDAHNKKAVSRSAEQQPSEKSTE--- 140
Query: 1412 ENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTR--GGSG 1469
PK+ P+D I+A + A + + +S + P +S + G SG
Sbjct: 141 ------PKTKPQDMISAGGESVAGITAISGKPGDKKKEKKSLTPAVPVESKPDKPSGKSG 194
Query: 1470 RISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTG--RSSK 1527
+AL + L + T++ T P + D + T E+ K + R
Sbjct: 195 MDAALDDLIDTLGGPEETEEENTTYTGPEV---SDPMSSTYIEELGKREVTIPPKYRELL 251
Query: 1528 SKEEPLF--PFNLDEFVTVDEVIEEVNPSQAKQNP-LKGKRKETLKNVPFSELNLKKKKG 1584
+K+E + P + + + D+ I+ ++ +P GK+ E ++ +
Sbjct: 252 AKKEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKKTEKEESTEVLKAQSAGTVR 311
Query: 1585 KTSTPRGVEGELSFVTL-DEIGEEEDAAAHLAQALVTVD----EVIDEEELNMEEMVKNS 1639
+ P+ + ++ T+ D+ E A+ QA +D + +DE + E++ K
Sbjct: 312 SAAPPQEKKRKVEKDTMSDQALEALSASLGTRQAEPELDLRSIKEVDEAKAKEEKLEKCG 371
Query: 1640 NSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEI------GEVEELP 1693
DE I + + + KD L E+ + +DE+ E +E P
Sbjct: 372 ED----DETIPSEYRLKPATDKDGKPLLPEPEEKPKPRSESELIDELSEDFDRSECKEKP 427
Query: 1694 L--NESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTL 1751
E + + A +E R S+ I S PE P+TL + DD+ + +L
Sbjct: 428 SKPTEKTEESKAAAPAPVSEA-VCRTSMCSIQSAPPE-PATL--KGTVPDDAVEALADSL 483
Query: 1752 DEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDG-DNDLKVELAQSKNDHPTDKKGNRK 1810
+ + ED + +KE+ +++GE+E+ D ++E + K+ P K +++
Sbjct: 484 GKKEADPEDGKPVMDKVKEKAKEEDREKLGEKEETIPPDYRLEEVKDKDGKPLLPKESKE 543
Query: 1811 KRAVDTKKTKLESLSQ--VGPVNENVME-EDLKTMIE-RHLTAKTPTKRVRIG----KTL 1862
+ ++ L++LS+ GP N + ++ ED K + ++TP + G T
Sbjct: 544 QLPPMSEDFLLDALSEDFSGPQNASSLKFEDAKLAAAISEVVSQTPASTTQAGAPPRDTS 603
Query: 1863 PSEKAVVTEPAKGEEAF--QMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELD 1920
S+K + K ++ + + DE ++D E+ + + D + +P E
Sbjct: 604 QSDKDLDDALDKLSDSLGQRQPDPDENKPMEDKVKEKAKAEHRDKLGERD--DTIPPEYR 661
Query: 1921 FLVPKAGFFCPI 1932
L+ G P+
Sbjct: 662 HLLDDNGQDKPV 673
Score = 41.2 bits (95), Expect = 0.010
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 767 KKVSASTLKRDADASKA----VEIVTSTSAAKTGQAKASVAKVNKSTGKSASS--VKSVV 820
+K +AS R A A++ V TS S +K G+ K S K S G S SS
Sbjct: 6 QKPAASPRPRRAAAARRTHEHVSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGT 65
Query: 821 TVAVKGNKASIKTAKSGGKKSLEAK--KTGNVKNKDSNKPVTIPENSEIKTSIEVKATEN 878
A K + +S T+KS E K KT K S KP ++P K + + + +
Sbjct: 66 ASATKVSASSGATSKSSSMNPTETKAVKTEPEKKSQSTKPKSLP-----KQASDTGSNDA 120
Query: 879 CAKEAISDAALEATENEPLNKETE 902
K+A+S +A E +P K TE
Sbjct: 121 HNKKAVSRSA----EQQPSEKSTE 140
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 55.8 bits (133), Expect = 4e-07
Identities = 61/209 (29%), Positives = 83/209 (39%), Gaps = 27/209 (12%)
Query: 480 ENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRS 539
+ E RR S S S R RR+ SS R RRSRS RS R H S+ RSR RS
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRS----------RSRRRSH---SKSRSRRRS 287
Query: 540 RSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKA---LEDVVQRSGHGTEFNKQKH 596
+SP R R+ R + RS S R ++ + R K +RS + +++
Sbjct: 288 KSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRR 347
Query: 597 LEAADKGHSPAQKPKTSSGTKPSVKPTSATKS---------DSNLGGHSIRCKSKNLEDD 647
+ + + PK PS + K D S + KSK+ E D
Sbjct: 348 SRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKD 407
Query: 648 TLSECKQVSDKAVSLQRKLRKEQSLHYGS 676
E K SDK V + E+ Y S
Sbjct: 408 --RERKSESDKDVKQVTRDYDEEEQGYDS 434
Score = 51.2 bits (121), Expect = 1e-05
Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 470 PSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRF 529
P RR +R+ RRS S S R ++ + R P Y RSRS R
Sbjct: 290 PRRRRSHSRERG----RRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRS---ASRE 342
Query: 530 ISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGT 589
R RSRS +RSP + R+P R K RS SP R + + D++++ D +RS
Sbjct: 343 RRRRRSRSGTRSPKKPRSPKR---KLSRSPSPRRHKKEKKKDKDKERS-RDERERSTSKK 398
Query: 590 EFNKQKHLEAADKGHS 605
+ +K K + K S
Sbjct: 399 KKSKDKEKDRERKSES 414
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 54.7 bits (130), Expect = 9e-07
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 36/185 (19%)
Query: 482 ETPRRRSHSPSP----RRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRS 537
E RRS SPS R+SR SS RRSRSP R +SRSP ++ R RS
Sbjct: 494 ERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSP-------NKERDRS 546
Query: 538 RSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHL 597
+SRSP R R SR + DR++ RS +Q
Sbjct: 547 QSRSPSEERE--------------HRQSRSPSKERDRRR------WRSPSKERERRQSRS 586
Query: 598 EAADKGHSPAQKPKTSSG-TKPSV----KPTSATKSDSNLGGHSIRCKSKNLEDDTLSEC 652
+ ++ HS ++ P SG ++P K S +++ S G HS S D + S
Sbjct: 587 SSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTV 646
Query: 653 KQVSD 657
+ D
Sbjct: 647 PRSPD 651
Score = 53.1 bits (126), Expect = 3e-06
Identities = 59/174 (33%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 471 SRRNEGNRKENE--TPRR-RSHS----PSPRRSR---RSSSSHRFRR-SRSPMHYMYRPR 519
SR + + +N+ TPRR RSH+ PS RS RSSS R R S SP R +
Sbjct: 332 SRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQ 391
Query: 520 SRSPRICH-----RFISRYRSRSRSRSPYRIRNPFRG-SPK----CFRSVSPERMSRRSV 569
S SP R ++ R RSRSRSPY+ R+ R SP C RS SP + RS
Sbjct: 392 SGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRS- 450
Query: 570 RSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPT 623
RS KA + RS + + + ++ HS P + S P+
Sbjct: 451 RSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPS 504
Score = 49.7 bits (117), Expect = 3e-05
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 472 RRNEGNRKENETPRRRSHSPSP--RRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRF 529
RR+ KE + + RS S RRSR S + R+SRSP R +SRSP
Sbjct: 498 RRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSP------ 551
Query: 530 ISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGT 589
S R +SRSP + R+ R +RS S ER R+S SS+ + + RS +
Sbjct: 552 -SEEREHRQSRSPSKERDRRR-----WRSPSKERERRQSRSSSEER---DHSRSRSPNKQ 602
Query: 590 EFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSD 629
+ + +K HS ++ P S S TS+ +SD
Sbjct: 603 SGYSRPRASSKEKAHSRSRTP--SKEGNHSQSRTSSKESD 640
Score = 42.0 bits (97), Expect = 0.006
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 464 WNPEILPSRRNEGNRKENET-PRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRS 522
++P + SR N+ + P+ S S SPRRSR S R RS H R SR+
Sbjct: 257 YSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRS--HSWKRNHSRA 314
Query: 523 PRICHRFI-------SRYRSRSRSRSPYRIRNPFRG-SPKCFRSVSPERMSRRSVRSSDR 574
+ I S+ RS S+ +S + R P RG S R+ S ER S RSS +
Sbjct: 315 RSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHS-RSSSK 373
Query: 575 KKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGG 634
+R G+ ++ + G S + P S P A +
Sbjct: 374 --------ERDHRGSSSPRK------ESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSP 419
Query: 635 HSIRCKSKNLEDDTLSECKQ 654
+ R +S++ + +C +
Sbjct: 420 YKARDRSRSRSPNKARDCSR 439
Score = 38.5 bits (88), Expect = 0.066
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 15/189 (7%)
Query: 465 NPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPR 524
NP SR+ + + R +S+SP+ SR S + RSR H +SRSPR
Sbjct: 233 NPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSH----SQSRSPR 288
Query: 525 ICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKAL-EDVVQ 583
R S+ R+ SR RS RN R + + + + RS + K+ +
Sbjct: 289 -RSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTP 347
Query: 584 RSGHGTEFNKQKHLE---------AADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGG 634
R G +++ E + ++ H + P+ SG S P +
Sbjct: 348 RRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSP 407
Query: 635 HSIRCKSKN 643
+ R +S++
Sbjct: 408 NKARDRSRS 416
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 53.5 bits (127), Expect = 2e-06
Identities = 167/831 (20%), Positives = 320/831 (38%), Gaps = 130/831 (15%)
Query: 1095 ELEKESPGLKNSPIDE----SEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEE 1150
E+ KE LK + + +E+Q S N L ++ T L E E +
Sbjct: 1089 EMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDETK------LKAHLEKLEVD 1142
Query: 1151 AEKATCDSDFAVETL-ELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDL 1209
K+ ++ F E L EL+ EE K ++ + S ++ E + + + N L
Sbjct: 1143 LNKSLKENTFLQEQLVELKMLAEEDKRKVSELTS---KLKTTDEEFQSLKSSHEKSNKSL 1199
Query: 1210 EKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNE 1269
E K E L + ++ + +LE +E + S T ++ ++ +
Sbjct: 1200 EDKSLEFKKLSEELAIQLDICCKKT--EALLEAKTNELINISSSKTNAILSRISHCQHRT 1257
Query: 1270 T-VSE-ILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQ-I 1326
T V E +L TC V+ + + + NIS ++ + EEKE K + D++ +
Sbjct: 1258 TKVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQAT-HQLEEKENQIKSMKADIESL 1316
Query: 1327 GTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSD 1386
TEK + E + A EK + T K ++ + E K + +S
Sbjct: 1317 VTEKEA-----LQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISS 1371
Query: 1387 VSSSKPSIKAVI---VSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPT 1443
+S + + +S + +A +S Q K DQ+ + LS K L K
Sbjct: 1372 LSKQLTDLNVQLQNSISLSEKEAAISSLRKQYDEEKCELLDQV---QDLSFKVDTLSKEK 1428
Query: 1444 -SARSGLAESSSKF----KPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPS 1498
SA + + S+KF K QS T+ + LQ +L +K++ E + + +
Sbjct: 1429 ISALEQVDDWSNKFSEWKKKAQSRFTQH-QNTVKELQIQLELK-----SKEAYEKDEQIN 1482
Query: 1499 IMKRD-DSNNKT-------LAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEV-IE 1549
++K + D NK + + +K K + ++ K + L++ +T + IE
Sbjct: 1483 LLKEELDQQNKRFDCLKGEMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIE 1542
Query: 1550 EVNPSQAKQNPLKG-KRKETLKNVP-FSELNLKKKKGKTSTPRGVEGELSFVTLD----- 1602
+N N K + KE ++ + F EL G+ R E E +TL+
Sbjct: 1543 SLNEVLKNYNQQKDIEHKELVQKLQHFQEL------GEEKDNRVKEAEEKILTLENQVYS 1596
Query: 1603 ---EIGEEEDAAAHLAQALVTVDEVID--EEELNMEEMVKNSNSLFTLDELID--QDDCI 1655
E+ ++ H+ ++ + +E + E+ L E K + ++ I + +
Sbjct: 1597 MKAELETKKKELEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLL 1656
Query: 1656 SHSEPKDV--------------TVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESADIT 1701
S E K+ T L E + + +E+L +V E + E L + SA
Sbjct: 1657 SQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSV-ESSQSETLIVPRSAKNV 1715
Query: 1702 FA-----TLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDLH--------- 1747
A +++G T + I + + E L V + ++++ H
Sbjct: 1716 AAYTEQEEADSQGCVQKTYEEKISVLQRNLTEKEKLLQRVGQEKEETVSSHFEMRCQYQE 1775
Query: 1748 -LVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKK 1806
L+ L+ + + + +L+EEL E+ + + +AQ +K+
Sbjct: 1776 RLIKLEHAEAKQHEDQSMIGHLQEEL-----------EEKNKKYSLIVAQH-----VEKE 1819
Query: 1807 GNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVR 1857
G K + K+ ENV ++ KT+ E+ LT + ++++
Sbjct: 1820 GG--KNNIQAKQNL-----------ENVFDDVQKTLQEKELTCQILEQKIK 1857
Score = 52.0 bits (123), Expect = 6e-06
Identities = 156/837 (18%), Positives = 317/837 (37%), Gaps = 103/837 (12%)
Query: 1108 IDESEVQTATDSPSVKPNELEE--ESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETL 1165
+D + D PS +E E+ ++ S+ E L+Q+ E V
Sbjct: 105 LDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKEQLIQRLRRMERSLSSYRGKYSELVTAY 164
Query: 1166 ELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQM-------FNSDLEKKGAEIIN 1218
++ Q E+ K + L S S+ + E EE ++QQ F++ LE+K I
Sbjct: 165 QM-LQREKKKLQGILSQSQDKSLRRIAELREELQMDQQAKKHLQEEFDASLEEKDQYISV 223
Query: 1219 PKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPST 1278
+T + LK L P D + + Q +A ++ S+ P
Sbjct: 224 LQTQV----------SLLKQRLRNGPMNV-DVLKPLPQLEPQAEVFTKEENPESDGEPVV 272
Query: 1279 CIVTLVPGIPTGDEKTVDKKNISE--KKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEG 1336
T V + T ++ ++N+ + K+ KE+ T E + E+ ++ E
Sbjct: 273 EDGTSVKTLETLQQRVKRQENLLKRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEK 332
Query: 1337 RMDAEKVEKMAAMKE-KPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIK 1395
D EK + + + A+N + + +KG+ A + +T + +++ + IK
Sbjct: 333 IKDLHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIK 392
Query: 1396 ------------------AVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEF 1437
A KA +T KTE + K+ +QI +K S +E
Sbjct: 393 QMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEE- 451
Query: 1438 GLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARP 1497
R L + S+ K + + S A KL KL +++ ++ QE +
Sbjct: 452 --------RISLQQELSRVKQEVVDVMKKSSEEQIA---KLQKLHEKELARKEQELTKKL 500
Query: 1498 SIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVI--EEVNPSQ 1555
+R+ +A + +++ + + +E L+E + I E N +
Sbjct: 501 QTREREFQEQMKVALEKSQSEYLKISQEKEQQES----LALEELELQKKAILTESENKLR 556
Query: 1556 AKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLA 1615
Q + R L+ E +L++ K ++ ++ +A +
Sbjct: 557 DLQQEAETYRTRILELESSLEKSLQENKNQSK---------------DLAVHLEAEKNKH 601
Query: 1616 QALVTVDEVIDEEELNMEEMVKNSNSLFT--LDELIDQDDCISHSEPKDVTVLSVAEEQD 1673
+TV ++++ + +E + ++L+T L L Q +E + + E++
Sbjct: 602 NKEITV--MVEKHKTELESLKHQQDALWTEKLQVLKQQ----YQTEMEKLREKCEQEKET 655
Query: 1674 LLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTV-------RDSIGFISSQV 1726
LLK + ++ I E+ E L E D+ L + +E V + + + Q
Sbjct: 656 LLKDKEIIFQAHIEEMNEKTL-EKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQT 714
Query: 1727 PEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNN-LKEELNFVTVDEVGEEED 1785
+ L + D+ + H +D + +E E S+ LK+++N + + ++
Sbjct: 715 DKMKQEL---EAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLEL----LLKE 767
Query: 1786 GDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIER 1845
D LK A +N K+ + + K +S EE L + ++
Sbjct: 768 RDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQK 827
Query: 1846 HLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEEA--FQMSEVDEESGLKDSEPERKRK 1900
L + T+R+ + K + +A + +A Q+ ++ ++ ++SE E+K K
Sbjct: 828 LLDLE--TERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVK 882
Score = 50.1 bits (118), Expect = 2e-05
Identities = 291/1541 (18%), Positives = 586/1541 (38%), Gaps = 283/1541 (18%)
Query: 638 RCKS---KNLEDDTL--SECKQVSDKAVSLQRKLRKEQSLHYGS-VLLITELPEDGCTEE 691
RCK + E TL SE + + ++ ++L K + LH LIT+L
Sbjct: 297 RCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKIKDLHMAEKTKLITQL-------R 349
Query: 692 DVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIKGKSVKICVPGK 751
D + L + + ++I +++ + +E KE A ++ +T +G+ ++
Sbjct: 350 DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRS-RIKQMTTQGEELREQKEKS 408
Query: 752 KKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQAKASVAKVNKSTGK 811
++A +E++K ++K + K A+ + ++ + TS + + +++V +
Sbjct: 409 ERAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQE--- 465
Query: 812 SASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKN--------KDSNKPVTIPE 863
VV V K ++ I + +K L K+ K ++ K
Sbjct: 466 -------VVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKS 518
Query: 864 NSE-IKTSIEVKATENCAKEAIS---DAALEATENE--PLNKETEEMCVMLVSNLPNKGY 917
SE +K S E + E+ A E + A L +EN+ L +E E ++ +
Sbjct: 519 QSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEK 578
Query: 918 SVEEVYDLAKPFG---------GLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMD 968
S++E + +K K+I ++ K +E + +++ + VL
Sbjct: 579 SLQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDAL--WTEKLQVLKQ 636
Query: 969 GNQLSISMAPENMN------IKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDGLQ 1022
Q + E +KD+E IF ++E + E ++ + + L++L + L
Sbjct: 637 QYQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMN-EKTLEKLDVKQTELESLSSE-LS 694
Query: 1023 CVLCVGLQFGKVDHHVFISNRNKAILQLDSPESAQSMY------SFLKQNPQNIGDHMLT 1076
VL + + + V +K +L++ Q + S +K++ +I
Sbjct: 695 EVLKARHKLEE-ELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSI--QRTE 751
Query: 1077 CSLSPKIDLPEVQI-EHDPELEKESPGLKNSPID----ESEVQTAT---------DSPSV 1122
+L +I+ E+ + E D L++ ++N D E E+Q A+ S +
Sbjct: 752 KALKDQINQLELLLKERDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQSATH 811
Query: 1123 KPNELEEESTPSIQ-------TETLVQQEEPCEEEAEKATCDSDFAVETLELETQGEEVK 1175
+ + EE +Q TE ++ ++ E EA+K ++ ++++ ++++
Sbjct: 812 EQTKAYEEQLAQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLE 871
Query: 1176 EEIPLVASASVSIEQFTENAEECALNQQMFNSDL--------------EKKGAEIINPK- 1220
++ + S+ Q E+ E +Q + +KK EI+ K
Sbjct: 872 KQNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREGQKKEIEILTQKL 931
Query: 1221 TALLPSDSVFAEE-----RNLKGILEESPSEAEDFISGITQTMVEAVAEVEKN--ETVSE 1273
+A S + EE +N + +E+ +A++ + + +++ A+++K T E
Sbjct: 932 SAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTALE 991
Query: 1274 ILP----------------STCIVTLVPGIPTGDEKTV------------DKKNISEKKG 1305
+ S I V + T ++ + D +I EKK
Sbjct: 992 LSQKEKQFNAKMLEMAQANSAGISDAVSRLETNQKEQIESLTEVHRRELNDVISIWEKKL 1051
Query: 1306 NMDEKE----------EKEFNTKETRMDLQI-GTEKAEKN--------EG-RMDAEKVEK 1345
N +E EKE E + + + G EK E N EG + D E
Sbjct: 1052 NQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLKEEGVKQDTTLNEL 1111
Query: 1346 MAAMKEKPA-------ENTLFKAYPNKGVGQANKP--------DETSKTSILA------V 1384
+K+K A + T KA+ K NK ++ + +LA V
Sbjct: 1112 QEQLKQKSAHVNSLAQDETKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKV 1171
Query: 1385 SDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTS 1444
S+++S + S + +K+ KS +++ + + K+ L
Sbjct: 1172 SELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAK 1231
Query: 1445 ARSGLAESSSKFKPTQSSLTRGG-------------SGRISALQGKLSKL---------D 1482
+ SSSK S ++ + +S L+ +L +L
Sbjct: 1232 TNELINISSSKTNAILSRISHCQHRTTKVKEALLIKTCTVSELEAQLRQLTEEQNTLNIS 1291
Query: 1483 YRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFV 1542
++ T Q +E E + MK D + T E K + +S+ KE +
Sbjct: 1292 FQQATHQLEEKENQIKSMKADIESLVTEKEALQKEGGNQQQAASE-KESCITQLK----- 1345
Query: 1543 TVDEVIEEVNPSQAKQNPLKGKRKE--------TLKNVPF-SELNLKKKKGKTSTPRGVE 1593
E+ E +N + LK K+ E T NV + ++L +K+ S+ R
Sbjct: 1346 --KELSENINAVTLMKEELKEKKVEISSLSKQLTDLNVQLQNSISLSEKEAAISSLRKQY 1403
Query: 1594 GELSFVTLDEIGEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDD 1653
E LD++ + L++ ++ E +D+ E K + S FT
Sbjct: 1404 DEEKCELLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFT--------- 1454
Query: 1654 CISHSEPKDVTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGD 1713
+ Q+ +K+ ++ E+ E +E ++ L+ + D
Sbjct: 1455 ----------------QHQNTVKELQIQL--ELKSKEAYEKDEQINLLKEELDQQNKRFD 1496
Query: 1714 TVRDSIGFISSQVPEDPSTLVT--------VDEIQD--DSSDLHLVTLDEVTEE-DEDSL 1762
++ + S++ + S L T + E++D + + +L+EV + ++
Sbjct: 1497 CLKGEMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKD 1556
Query: 1763 ADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLE 1822
+ L ++L E+GEE+D +V+ A+ K + + K ++TKK +LE
Sbjct: 1557 IEHKELVQKLQH--FQELGEEKDN----RVKEAEEK-ILTLENQVYSMKAELETKKKELE 1609
Query: 1823 SLSQVGPVNENVMEEDLKTM---IERHLTAK-TPTKRVRIGKTLPSEKAVVTEPAKGEEA 1878
++ ++ EE+LK + +E AK KR K +K ++++ + EE
Sbjct: 1610 HVN----LSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQ 1665
Query: 1879 FQMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELDFLVPKAGFFCPICSLFYS 1938
++ S L ER+R+ KSV S E L +VP++ + +
Sbjct: 1666 YKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETL--IVPRS---AKNVAAYTE 1720
Query: 1939 GEKAMTNHCKSTRHKQN--------TEKFMAKQRKEKEQNE 1971
E+A + C +++ TEK QR +E+ E
Sbjct: 1721 QEEADSQGCVQKTYEEKISVLQRNLTEKEKLLQRVGQEKEE 1761
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 53.5 bits (127), Expect = 2e-06
Identities = 96/467 (20%), Positives = 176/467 (37%), Gaps = 79/467 (16%)
Query: 1109 DESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETLELE 1168
D E+ +TD+P+ KP + + + + +E + A+ + D ++ ELE
Sbjct: 64 DNIELTVSTDTPNKKPTKGKGK-------------KHEADELSGDASVEDDAFIKDCELE 110
Query: 1169 TQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINP------KTA 1222
Q ++ + + E+F EN EE ++++ +++ K+ E+I +
Sbjct: 111 NQEAHEQDGNDELKDS----EEFGENEEENVHSKELLSAEENKRAHELIEAEGIEDIEKE 166
Query: 1223 LLPSDSVFAEERNLKGIL-----EESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPS 1277
+ S + A+E L EE +E E ++ T E E+E + TV E
Sbjct: 167 DIESQEIEAQEGEDDTFLTAQDGEEEENEKEGSLAEADHTAHE---EMEAHTTVKEAEDD 223
Query: 1278 TCIVTLVPG------------IPTGDEKTVDKKNISEKKGNMD------EKEEKEFNTKE 1319
VT+ + TG + S+ K D EKE K++
Sbjct: 224 NISVTIQAEDAITLDFDGDDLLETGKNVKITDSEASKPKDGQDAIAQSPEKESKDYEMNA 283
Query: 1320 TRMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAE------NTLFKAYPNKGV-GQANK 1372
D K E + + VEK A K AE +TL K + G GQA
Sbjct: 284 NHKD--------GKKEDCVKGDPVEKEARESSKKAESGDKEKDTLKKGPSSTGASGQAKS 335
Query: 1373 PDETSKTSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKS---------FPKSVPR 1423
+ SK S + D S S SS K + N K+ + K +
Sbjct: 336 SSKESKDSKTSSKDDKGSTSSTSGSSGSSTKNIWVSGLSSNTKAADLKNLFGKYGKVLSA 395
Query: 1424 DQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDY 1483
+ + AK +G++ +S+ E S + G + ++G SK +
Sbjct: 396 KVVTNARSPGAKCYGIVTMSSS----TEVSRCIAHLHRTELHGQLISVEKVKGDPSKKEM 451
Query: 1484 RDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKE 1530
+ + +++ +R S K++ S+ + + + K + + S+ KE
Sbjct: 452 K--KENDEKSSSRSSGDKKNTSDRSSKTQASVKKEEKRSSEKSEKKE 496
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 [Homo
sapiens]
Length = 916
Score = 52.0 bits (123), Expect = 6e-06
Identities = 88/393 (22%), Positives = 149/393 (37%), Gaps = 34/393 (8%)
Query: 1091 EHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEE 1150
E +PE E+E K SP+ + +P VK E E+E Q E + E ++
Sbjct: 496 EEEPEAEEEEVAAKKSPVKAT-------APEVKEEEGEKEEEEG-QEEEEEEDEGAKSDQ 547
Query: 1151 AEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLE 1210
AE+ + + + E E E + E + E + + ++ E +EE A +++
Sbjct: 548 AEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELV----- 602
Query: 1211 KKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE---------A 1261
A++ P+ A P EE+ K + +SP E E S + ++ VE +
Sbjct: 603 -ADAKVEKPEKAKSPVPKSPVEEKG-KSPVPKSPVE-EKGKSPVPKSPVEEKGKSPVPKS 659
Query: 1262 VAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETR 1321
E + VS+ + VP P + K+ K + KG E+EEKE
Sbjct: 660 PVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKS--KAEVG--KGEQKEEEEKEVKEAPKE 715
Query: 1322 MDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSI 1381
++ EK + + AE K A+ E K + K + KP + K
Sbjct: 716 EKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKE 775
Query: 1382 LAVSDVSSSKP-SIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGL- 1439
A + S + S K S + A + E ++ + E++ GL
Sbjct: 776 KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLD 835
Query: 1440 LKPTSARSGLAESSSKF---KPTQSSLTRGGSG 1469
L P + G +S K K + + GG G
Sbjct: 836 LSPADEKKGGDKSEEKVVVTKTVEKITSEGGDG 868
Score = 51.6 bits (122), Expect = 8e-06
Identities = 100/485 (20%), Positives = 179/485 (36%), Gaps = 73/485 (15%)
Query: 1230 FAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPT 1289
F EE + +E+ SE E+ ++ IT+ + ++ E EK E E P
Sbjct: 452 FVEEIIEETKVEDEKSEMEEALTAITEELAVSMKE-EKKEAAEEKEEE----------PE 500
Query: 1290 GDEKTVD------KKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAE----KNEGRMD 1339
+E+ V K E K EKEE+E +E D +++AE + EG +
Sbjct: 501 AEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSE 560
Query: 1340 AEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKP-SIKAVI 1398
E+ E+ E AE +A K V + ++ T + V+D KP K+ +
Sbjct: 561 KEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEE---LVADAKVEKPEKAKSPV 617
Query: 1399 VSSP---KAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSK 1455
SP K K+ V K+ ++ VP+ + + K + + + + + K
Sbjct: 618 PKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEK 677
Query: 1456 FK-PTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQN 1514
K P S + +G+ + + +++ + +E + K D K AE
Sbjct: 678 AKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESP 737
Query: 1515 ------------TKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQA------ 1556
TK+ K + +K + +PL E + EE +
Sbjct: 738 VKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRK 797
Query: 1557 ----------------KQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVT 1600
++ KG +E K V + L+L K + E + T
Sbjct: 798 EDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKT 857
Query: 1601 LDEI-GEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSE 1659
+++I E D A VTV + ++E E EE + ++ + + SH+
Sbjct: 858 VEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKV---------EKVTSHAI 908
Query: 1660 PKDVT 1664
K+VT
Sbjct: 909 VKEVT 913
Score = 32.3 bits (72), Expect = 4.7
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 1752 DEVTEEDEDSLADFNNLKEELNFVTVDE-VGEEEDGDNDLKVELAQSKNDHP----TDKK 1806
+E E+E+ A + +K V +E EEE+G + + E +K+D ++K+
Sbjct: 497 EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKE 556
Query: 1807 GNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSEK 1866
G+ +K + ++ + E+ ++ E ++ K + E+ T + V K EK
Sbjct: 557 GSSEKEEGEQEEGETEAEAE----GEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 612
Query: 1867 AVVTEP-----AKGEEAFQMSEVDE--ESGLKDSEPERKRK----KTEDSSSGKSVASDV 1915
A P KG+ S V+E +S + S E K K K+ GKS S
Sbjct: 613 AKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKS 672
Query: 1916 PEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEER 1975
P E KA P + + KA K+ EK + + KE++ + EE+
Sbjct: 673 PVE-----EKAKSPVPKSPVEEAKSKAEVG---KGEQKEEEEKEVKEAPKEEKVEKKEEK 724
Score = 31.6 bits (70), Expect = 8.1
Identities = 62/259 (23%), Positives = 93/259 (35%), Gaps = 51/259 (19%)
Query: 1080 SPKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTET 1139
SP + + + P EK + SP++E++ + K E E+E + + E
Sbjct: 659 SPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEE-EKEVKEAPKEEK 717
Query: 1140 LVQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECA 1199
+ ++EE ++ EK +S + E V E + + S V +E+ E EE
Sbjct: 718 VEKKEEKPKDVPEKKKAES---------PVKEEAVAEVVTITKSVKVHLEK--ETKEEGK 766
Query: 1200 LNQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMV 1259
QQ + EK G E G EE S+ G + +
Sbjct: 767 PLQQ--EKEKEKAGGE----------------------GGSEEEGSDKG--AKGSRKEDI 800
Query: 1260 EAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTV-----DKKNISEKKGNMDEKEEKE 1314
EVE E V + T G +EK V D EKKG D+ EEK
Sbjct: 801 AVNGEVEGKEEVEQ-------ETKEKGSGREEEKGVVTNGLDLSPADEKKGG-DKSEEKV 852
Query: 1315 FNTKETRMDLQIGTEKAEK 1333
TK G + A K
Sbjct: 853 VVTKTVEKITSEGGDGATK 871
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 [Homo
sapiens]
Length = 540
Score = 52.0 bits (123), Expect = 6e-06
Identities = 88/393 (22%), Positives = 149/393 (37%), Gaps = 34/393 (8%)
Query: 1091 EHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEE 1150
E +PE E+E K SP+ + +P VK E E+E Q E + E ++
Sbjct: 120 EEEPEAEEEEVAAKKSPVKAT-------APEVKEEEGEKEEEEG-QEEEEEEDEGAKSDQ 171
Query: 1151 AEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLE 1210
AE+ + + + E E E + E + E + + ++ E +EE A +++
Sbjct: 172 AEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELV----- 226
Query: 1211 KKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE---------A 1261
A++ P+ A P EE+ K + +SP E E S + ++ VE +
Sbjct: 227 -ADAKVEKPEKAKSPVPKSPVEEKG-KSPVPKSPVE-EKGKSPVPKSPVEEKGKSPVPKS 283
Query: 1262 VAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETR 1321
E + VS+ + VP P + K+ K + KG E+EEKE
Sbjct: 284 PVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKS--KAEVG--KGEQKEEEEKEVKEAPKE 339
Query: 1322 MDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSI 1381
++ EK + + AE K A+ E K + K + KP + K
Sbjct: 340 EKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKE 399
Query: 1382 LAVSDVSSSKP-SIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGL- 1439
A + S + S K S + A + E ++ + E++ GL
Sbjct: 400 KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLD 459
Query: 1440 LKPTSARSGLAESSSKF---KPTQSSLTRGGSG 1469
L P + G +S K K + + GG G
Sbjct: 460 LSPADEKKGGDKSEEKVVVTKTVEKITSEGGDG 492
Score = 51.6 bits (122), Expect = 8e-06
Identities = 100/485 (20%), Positives = 179/485 (36%), Gaps = 73/485 (15%)
Query: 1230 FAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPT 1289
F EE + +E+ SE E+ ++ IT+ + ++ E EK E E P
Sbjct: 76 FVEEIIEETKVEDEKSEMEEALTAITEELAVSMKE-EKKEAAEEKEEE----------PE 124
Query: 1290 GDEKTVD------KKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAE----KNEGRMD 1339
+E+ V K E K EKEE+E +E D +++AE + EG +
Sbjct: 125 AEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSE 184
Query: 1340 AEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKP-SIKAVI 1398
E+ E+ E AE +A K V + ++ T + V+D KP K+ +
Sbjct: 185 KEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEE---LVADAKVEKPEKAKSPV 241
Query: 1399 VSSP---KAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSK 1455
SP K K+ V K+ ++ VP+ + + K + + + + + K
Sbjct: 242 PKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEK 301
Query: 1456 FK-PTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQN 1514
K P S + +G+ + + +++ + +E + K D K AE
Sbjct: 302 AKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESP 361
Query: 1515 ------------TKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQA------ 1556
TK+ K + +K + +PL E + EE +
Sbjct: 362 VKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRK 421
Query: 1557 ----------------KQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVT 1600
++ KG +E K V + L+L K + E + T
Sbjct: 422 EDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKT 481
Query: 1601 LDEI-GEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSE 1659
+++I E D A VTV + ++E E EE + ++ + + SH+
Sbjct: 482 VEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKV---------EKVTSHAI 532
Query: 1660 PKDVT 1664
K+VT
Sbjct: 533 VKEVT 537
Score = 32.3 bits (72), Expect = 4.7
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 1752 DEVTEEDEDSLADFNNLKEELNFVTVDE-VGEEEDGDNDLKVELAQSKNDHP----TDKK 1806
+E E+E+ A + +K V +E EEE+G + + E +K+D ++K+
Sbjct: 121 EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKE 180
Query: 1807 GNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSEK 1866
G+ +K + ++ + E+ ++ E ++ K + E+ T + V K EK
Sbjct: 181 GSSEKEEGEQEEGETEAEAE----GEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 236
Query: 1867 AVVTEP-----AKGEEAFQMSEVDE--ESGLKDSEPERKRK----KTEDSSSGKSVASDV 1915
A P KG+ S V+E +S + S E K K K+ GKS S
Sbjct: 237 AKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKS 296
Query: 1916 PEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEER 1975
P E KA P + + KA K+ EK + + KE++ + EE+
Sbjct: 297 PVE-----EKAKSPVPKSPVEEAKSKAEVG---KGEQKEEEEKEVKEAPKEEKVEKKEEK 348
Score = 31.6 bits (70), Expect = 8.1
Identities = 62/259 (23%), Positives = 93/259 (35%), Gaps = 51/259 (19%)
Query: 1080 SPKIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTET 1139
SP + + + P EK + SP++E++ + K E E+E + + E
Sbjct: 283 SPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEE-EKEVKEAPKEEK 341
Query: 1140 LVQQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECA 1199
+ ++EE ++ EK +S + E V E + + S V +E+ E EE
Sbjct: 342 VEKKEEKPKDVPEKKKAES---------PVKEEAVAEVVTITKSVKVHLEK--ETKEEGK 390
Query: 1200 LNQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMV 1259
QQ + EK G E G EE S+ G + +
Sbjct: 391 PLQQ--EKEKEKAGGE----------------------GGSEEEGSDKG--AKGSRKEDI 424
Query: 1260 EAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTV-----DKKNISEKKGNMDEKEEKE 1314
EVE E V + T G +EK V D EKKG D+ EEK
Sbjct: 425 AVNGEVEGKEEVEQ-------ETKEKGSGREEEKGVVTNGLDLSPADEKKGG-DKSEEKV 476
Query: 1315 FNTKETRMDLQIGTEKAEK 1333
TK G + A K
Sbjct: 477 VVTKTVEKITSEGGDGATK 495
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 52.0 bits (123), Expect = 6e-06
Identities = 111/563 (19%), Positives = 203/563 (36%), Gaps = 79/563 (14%)
Query: 1084 DLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQ 1143
D E + E + E+E K I E++V+ + K E +EE+ +
Sbjct: 179 DAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEE---KTTESQEETVVMSLKNGQISS 235
Query: 1144 EEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVAS--ASVSIEQFTENAEECALN 1201
EEP +EE + D E +E E + E L A + EQ + A+E A
Sbjct: 236 EEPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERARI 295
Query: 1202 QQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEA 1261
+ + +++ + + + AEER + I EE AE+ + E
Sbjct: 296 EAEEKAAAQERERREAEERERMREEEKRAAEER--QRIKEEEKRAAEE----RQRIKEEE 349
Query: 1262 VAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETR 1321
E+ + + E ++K +E++ +EE++ +E +
Sbjct: 350 KRAAEERQRIKE----------------------EEKRAAEERQRARAEEEEKAKVEEQK 387
Query: 1322 MDLQIGTEKAEKNEGRMDAEKVEKMAAMK---EKPAENTLFKAYPNKGVGQANKPDETSK 1378
+ Q+ +K E ++ EKVE+ K EK A+ + K K E
Sbjct: 388 RNKQLEEKKHAMQETKIKGEKVEQKIEGKWVNEKKAQEDKLQTAVLK------KQGEEKG 441
Query: 1379 TSILAVSD-VSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEF 1437
T + A + + KP+ K + K K E KSF + R + E K EF
Sbjct: 442 TKVQAKREKLQEDKPTFKKEEIKDEKIKKDKEPKEEVKSF---MDRKKGFTEVKSQNGEF 498
Query: 1438 GLLK-----PTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQE 1492
K T +R G +S K + + R+ L+ + + + + K Q+
Sbjct: 499 MTHKLKHTENTFSRPG-GRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQK 557
Query: 1493 TEAR----PSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVI 1548
+ + K+ + K L E+ + + R + +EE +
Sbjct: 558 QQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKLREEEEK------------RRLK 605
Query: 1549 EEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRG----VEGELSFVTLDEI 1604
EE+ +A + E + +P L+ KK K TP+G +E F+
Sbjct: 606 EEIERRRA-------EAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEERAEFLNKSVQ 658
Query: 1605 GEEEDAAAHLAQALVTVDEVIDE 1627
+ H A + +D +++
Sbjct: 659 KSSGVKSTHQAAIVSKIDSRLEQ 681
Score = 38.1 bits (87), Expect = 0.086
Identities = 83/453 (18%), Positives = 167/453 (36%), Gaps = 38/453 (8%)
Query: 1231 AEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPTG 1290
A ER + E + E+ G VE A+ N E +T T V G
Sbjct: 38 ARERRRRARQERLRQKQEEESLGQVTDQVEVNAQ---NSVPDEEAKTTTTNTQVEGDDEA 94
Query: 1291 D--EKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQIG-------------TEKAEKNE 1335
E+ ++ +K+ + +KEF+ T L + TEK EK+E
Sbjct: 95 AFLERLARREERRQKRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSE 154
Query: 1336 GRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSD-------VS 1388
R + ++E+ + + +N A NK + + +E K ++ +
Sbjct: 155 SRQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEE 214
Query: 1389 SSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSG 1448
+ S + +V S K +S E ++ + D+I+ +K+ ++ + AR
Sbjct: 215 KTTESQEETVVMSLK-NGQISSEEPKQEEEREQGSDEISHHEKMEEEDKERAEAERARLE 273
Query: 1449 LAESSSKFKPTQSSLTRGGSGRISALQ----GKLSKLDYRDITKQSQETEARPSIMKRDD 1504
AE + K Q RI A + + + + + + +E + +R
Sbjct: 274 -AEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIK 332
Query: 1505 SNNKTLAEQNTK---NPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPL 1561
K AE+ + K + KEE + +E E+ + K+N
Sbjct: 333 EEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEE-EKAKVEEQKRNKQ 391
Query: 1562 KGKRKETLKNVPFSELNLKKK-KGK-TSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALV 1619
++K ++ +++K +GK + + E +L L + GEE+ + +
Sbjct: 392 LEEKKHAMQETKIKGEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKL 451
Query: 1620 TVDE-VIDEEELNMEEMVKNSNSLFTLDELIDQ 1651
D+ +EE+ E++ K+ + +D+
Sbjct: 452 QEDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDR 484
Score = 37.4 bits (85), Expect = 0.15
Identities = 78/401 (19%), Positives = 156/401 (38%), Gaps = 56/401 (13%)
Query: 1513 QNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNV 1572
QN TT + KS E + ++E TV + ++ + A++N + K KE
Sbjct: 138 QNDTAENETTEKEEKS-ESRQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKE----- 191
Query: 1573 PFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVTVDEVIDEEELNM 1632
E K K+G E ++ + ++ E ++ ++ + ++ EE
Sbjct: 192 --EEEEEKPKRGSIG-----ENQVEVMVEEKTTESQEETVVMS---LKNGQISSEEPKQE 241
Query: 1633 EEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTV-DEIGEVEE 1691
EE + S+ + +++ ++D + +E + AEE++ +K E+ + DE +E
Sbjct: 242 EEREQGSDEISHHEKMEEEDKERAEAERARLE----AEERERIKAEQDKKIADERARIE- 296
Query: 1692 LPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTL 1751
A+ A + E + R+ + + E+ + ++ +
Sbjct: 297 ------AEEKAAAQERERREAEE-RERMREEEKRAAEERQRIKEEEKRAAEERQ------ 343
Query: 1752 DEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKK 1811
+ EE++ + + +KEE + + + KVE + +K+ KK
Sbjct: 344 -RIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVE------EQKRNKQLEEKK 396
Query: 1812 RAVDTKKTKLESLSQVGP---VNENVMEED-LKTMIERHLTAKTPTKRVRIGKTLPSEKA 1867
A+ K K E + Q VNE +ED L+T + + + TK + L +K
Sbjct: 397 HAMQETKIKGEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKP 456
Query: 1868 VVTEPAKGEEAFQMSEVDEESGLKDSEPERKRKKTEDSSSG 1908
F+ E+ +E KD EP+ + K D G
Sbjct: 457 T----------FKKEEIKDEKIKKDKEPKEEVKSFMDRKKG 487
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 52.0 bits (123), Expect = 6e-06
Identities = 87/437 (19%), Positives = 162/437 (37%), Gaps = 52/437 (11%)
Query: 1109 DESEVQTATDSPSVKPNELEEESTPS-------IQTETLVQQEEPCEEEAEKATCDSDFA 1161
DE + D P ++ E+ ++ T IQT+ +++E +E+ + A
Sbjct: 125 DEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKA 184
Query: 1162 VETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKT 1221
++E ++ K E +A + ++ E+ + + K+ A + +
Sbjct: 185 THKEKIE---KKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVK-EV 240
Query: 1222 ALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIV 1281
PS E++ + + + F + V + ++ + LP+
Sbjct: 241 QKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPLPTEQAS 300
Query: 1282 TLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAE 1341
P P +EK +KK +K + +K+EKE K++ + I EK E + +
Sbjct: 301 RPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASETKQ 360
Query: 1342 KVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSS 1401
K+AA A K DE + SK + K V
Sbjct: 361 GTVKIAAQ-------------------AAAKKDEKKE----------DSKKTKKPAEVEQ 391
Query: 1402 PKAKATVSK---TENQKSFPK--SVPRD-QINAEKKLSAKEFGLLKPTSARSGLAESSSK 1455
PK K K E KS K SVP D Q+ A+ + + +E G + A G E +
Sbjct: 392 PKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTT 451
Query: 1456 FKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNT 1515
K + + + SG+ S++ + ++ + E P K+D+ +K E
Sbjct: 452 -KTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASLKEKEPE-TKKDEKMSKAGKEVKP 509
Query: 1516 KNPKSTTGRSSKSKEEP 1532
K P+ K +E+P
Sbjct: 510 KPPQ----LQGKKEEKP 522
Score = 51.2 bits (121), Expect = 1e-05
Identities = 94/440 (21%), Positives = 159/440 (36%), Gaps = 63/440 (14%)
Query: 548 PFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPA 607
P SP ++ + + V S +KK ED+ ++S T + +K P
Sbjct: 302 PTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEK--------KEPG 353
Query: 608 QKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLR 667
+ +T GT +A K + S + K + + ++ +K V + +
Sbjct: 354 KASETKQGTVKIAAQAAAKKDEKK--EDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPK 411
Query: 668 KEQSLHYGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKE----AYLEMEFKE 723
KE S +P D + + + G V+ VP +KE +E E ++
Sbjct: 412 KEHS-----------VPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRK 460
Query: 724 AITAIMKYIETTPLTIKGKSVKICVPGKKKAQNKEVKK--------KTLESKKVSASTLK 775
+ I IKGK K VP K + E KK K ++ K K
Sbjct: 461 EKSGKTSSILKDKEPIKGKEEK--VPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQGKK 518
Query: 776 RDADASKAVEIVTSTSAAKTGQAKASVAKVNK--STGKSASSV-KSVVTVAVKGNKASIK 832
+ + + + K K + K K S GK V K V V ++ K
Sbjct: 519 EEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTIE------K 572
Query: 833 TAKSGGKKSLEAKKTGNVKNKDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEAT 892
TAK K E ++ K ++KP P+ + T K TE KE+ A ++
Sbjct: 573 TAKPKPTKKAEHREREPPSIK-TDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMKHL 631
Query: 893 ENEPLNKETEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDILILSSHKKA---YIEIN 949
E ++ E + + V KP KD+ + + KKA +++
Sbjct: 632 REEKVSTRKESL-------------QLHNVTKAEKPARVSKDVEDVPASKKAKEGTEDVS 678
Query: 950 RKAAESMVKFYTCFPVLMDG 969
+S + F+ C V +DG
Sbjct: 679 PTKQKSPISFFQC--VYLDG 696
Score = 40.8 bits (94), Expect = 0.013
Identities = 69/351 (19%), Positives = 120/351 (34%), Gaps = 42/351 (11%)
Query: 554 KCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTS 613
K + PER + V +++K E V ++ K H E +K +KP+T
Sbjct: 147 KTEKQEKPERKIQTKVTHKEKEKGKEKVREKE---KPEKKATHKEKIEK----KEKPETK 199
Query: 614 SGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLH 673
+ K K +A KS+ K ++ + KQ + K +Q+ K +
Sbjct: 200 TLAKEQKKAKTAEKSEEKT--------KKEVKGGKQEKVKQTAAKVKEVQKTPSKPKE-- 249
Query: 674 YGSVLLITELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIE 733
E+ + + + Y + ++ + K + +
Sbjct: 250 ---------------KEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAI---- 290
Query: 734 TTPLTIKGKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAA 793
P + + P + KE +KK E K S + K D K E T+
Sbjct: 291 --PPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVE 348
Query: 794 KTGQAKASVAKVNK-STGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKN 852
K KAS K A++ K K K + + GKK E K+
Sbjct: 349 KKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQ-EKKEKHVEPA 407
Query: 853 KDSNKPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEE 903
K K ++P + ++K E +A E +I A+ + E K E+
Sbjct: 408 KSPKKEHSVPSDKQVKAKTE-RAKEEIGAVSIK-KAVPGKKEEKTTKTVEQ 456
Score = 34.3 bits (77), Expect = 1.2
Identities = 86/363 (23%), Positives = 141/363 (38%), Gaps = 69/363 (19%)
Query: 1095 ELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEK- 1153
++EK+ PG K S + V+ A + + K +E +E+S + + + Q + +E+ EK
Sbjct: 346 DVEKKEPG-KASETKQGTVKIAAQA-AAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKH 403
Query: 1154 ----ATCDSDFAVET-LELETQGEEVKEEIPLV----ASASVSIEQFTENAEECALNQQM 1204
+ + +V + +++ + E KEEI V A E+ T+ E+ ++
Sbjct: 404 VEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKS 463
Query: 1205 FNSDLEKKGAEIINPKTALLPSD-------------------SVFAEERNLKGILEESPS 1245
+ K E I K +P+ V + L+G EE P
Sbjct: 464 GKTSSILKDKEPIKGKEEKVPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPE 523
Query: 1246 -----EAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNI 1300
EA+ IS Q + + + EK TVS P ++ V + EKT K
Sbjct: 524 PQIKKEAKPAISEKVQIHKQDIVKPEK--TVSHGKPEEKVLKQVKAVTI--EKTAKPK-- 577
Query: 1301 SEKKGNMDEKEEKEFNT-------KETRMDLQIGTEKAE------KNEGRMDAEKVEKMA 1347
KK E+E T K T + G +K E K + M + EK++
Sbjct: 578 PTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMKHLREEKVS 637
Query: 1348 AMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAV-IVSSPKAKA 1406
KE + V +A KP SK V DV +SK + + VS K K+
Sbjct: 638 TRKE---------SLQLHNVTKAEKPARVSKD----VEDVPASKKAKEGTEDVSPTKQKS 684
Query: 1407 TVS 1409
+S
Sbjct: 685 PIS 687
Score = 33.1 bits (74), Expect = 2.8
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 9/135 (6%)
Query: 1779 EVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQ--VGPVNENVME 1836
+ E + G + + A K++ D K +K V+ K K + + V P E
Sbjct: 354 KASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKE 413
Query: 1837 EDLKTMIERHLTAKTPTKRVRIG-----KTLPSEKAVVTEPAKGEEAFQMSEVDEESGLK 1891
+ + ++ + AKT + IG K +P +K T +E + S LK
Sbjct: 414 HSVPS--DKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILK 471
Query: 1892 DSEPERKRKKTEDSS 1906
D EP + +++ +S
Sbjct: 472 DKEPIKGKEEKVPAS 486
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 51.6 bits (122), Expect = 8e-06
Identities = 162/818 (19%), Positives = 317/818 (38%), Gaps = 107/818 (13%)
Query: 1126 ELEEESTPSIQTETLVQQEEP---------CEEEAEKATCDSDFAVETLELETQGEEVKE 1176
+L +E Q E + QEE +++ E A + FA + L +GE++ +
Sbjct: 1594 KLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQ 1653
Query: 1177 EIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTAL------LPS--DS 1228
E +A ++ + E+ A ++ L KKG ++ K L LP +
Sbjct: 1654 EAEKLAQKR---KKLAKKWEKVAREEEK----LAKKGGKLAEVKNILAQKVEELPQREQN 1706
Query: 1229 VFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVPGIP 1288
+ +E+ L LEE + E+ + E VE+ + ++E
Sbjct: 1707 LDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAE--------------- 1751
Query: 1289 TGDEKTV--DKKNISEKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAEKVEKM 1346
+E+ + ++ +SE++ + ++EE KE + + E+ GR + +EK
Sbjct: 1752 --EEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKK 1809
Query: 1347 AAMKEKPAE--NTLFKAYPNKGVGQANKPDETSKTSILAVSD-VSSSKPSIKAVIVSSPK 1403
+ +K N++ + NK + K K ++ + ++ K ++
Sbjct: 1810 MKLAQKRERWINSMEELTKNKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTH 1869
Query: 1404 AKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSL 1463
+K + + +N+ + E+KL+ ++ ++K + LAE+ K + SL
Sbjct: 1870 SKKQLVQVKNKLGMFNKI---LAQVEEKLTQEKETVIK---KKEKLAETEKKLVQVEDSL 1923
Query: 1464 TRGGSG----------RISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQ 1513
+ + +QGK DI K E +A MKR L E
Sbjct: 1924 AKKQEKLAQEKMKLALEKAMVQGKKRLRGELDIAK---EEKALNLEMKRLAEEKMRLVEG 1980
Query: 1514 NTKNPKSTTGRSSKSK-----EEPLF--PFNLDEFVTVDE----VIEEVNPSQAKQNPLK 1562
K T +S+ + E+ LF +L+E + + E +EE ++ K +
Sbjct: 1981 KETLSKGETPETSRQRKMTQVEQELFERKLSLEEKILLHEDRILAMEESEIAKGKLEFTR 2040
Query: 1563 GKR---KETLKNVPFSELNLKKKKGKTSTP---RGVEGELSFVTLDE--IGEEEDAAAHL 1614
G+R + K S +KK++ + P + L +T DE + +EE +
Sbjct: 2041 GQRIFVQGQRKLAKASRKLIKKRESLSKEPAKLNKILKALQKLTRDERKLTQEEIKMTKM 2100
Query: 1615 AQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSE-PKDVTVLSVAEEQD 1673
+AL + E L++E+ + ++ + D SE KD L+ + +
Sbjct: 2101 KRAL-----FVKERRLSIEQ---------SKLDIKEWDFSEKRSELTKDEKKLARKQRKL 2146
Query: 1674 LLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTL 1733
K R++ +E EE L + + L+ + G + I F+ + +
Sbjct: 2147 ANKMRRMINKEEKMTEEESKL--ARKHSEVILDDEEEGGIEEEEVIPFLKRRWRKRKEAK 2204
Query: 1734 VTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVE 1793
+ SS + V +E E+ +SL D +E L+ +E EEE+ + + E
Sbjct: 2205 RGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEE---E 2261
Query: 1794 LAQSKNDHPTDKKGNRK---KRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIERHLTAK 1850
+ + + + +++G K K + KK K E + E V EE + M E +
Sbjct: 2262 VREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESL 2321
Query: 1851 TPTKRVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEES 1888
+ + +L E E K E+ F++ E +S
Sbjct: 2322 SDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKS 2359
Score = 39.3 bits (90), Expect = 0.039
Identities = 168/923 (18%), Positives = 343/923 (37%), Gaps = 129/923 (13%)
Query: 1084 DLPEVQIEHDPELEKESPGLKNSPIDESE--VQTATDSPSVKPNELEEESTPSIQTETLV 1141
D EV +E + E E K + E + +Q + E + + L
Sbjct: 1540 DEEEVTLEEEVSREGEE---KEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLA 1596
Query: 1142 QQEEP-CEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
Q+EE +EE + A + A +++ E+ + A ++ Q E + A
Sbjct: 1597 QEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAE 1656
Query: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVE 1260
L KK ++ + L AE +N+ E + E + + + +
Sbjct: 1657 KLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLDWQEKELAQ 1716
Query: 1261 AVAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET 1320
+ E+E + +E + ++ +++++G + E+++K +E
Sbjct: 1717 ELEELEWDM---------------------EELSWKEEELNQEEGKLVEEKKKLAEEEEA 1755
Query: 1321 ----RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEK-PAENTLFKAYPNKGVGQANKPDE 1375
R L K + E + EK EK+A KEK P E + + + K +
Sbjct: 1756 LAWQREKLSEEETKLAQEEELLIQEK-EKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQ 1814
Query: 1376 TSKTSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAK 1435
+ I ++ +++ +K +I+ K A K Q+ ++KL+ +
Sbjct: 1815 KRERWINSMEELTKNK-----MILYQKKNLAQEKKNLAQE-------------KEKLAQR 1856
Query: 1436 EFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISA-LQGKLSKLDYRDITKQSQETE 1494
+ LL + L S + ++ L G +I A ++ KL++ I K+ + E
Sbjct: 1857 KENLLYN---KERLTHSKKQLVQVKNKL--GMFNKILAQVEEKLTQEKETVIKKKEKLAE 1911
Query: 1495 ARPSIMKRDDS---NNKTLAEQNTK---------NPKSTTGRSSKSKEEPLFPFNLDEFV 1542
+++ +DS + LA++ K K G +KEE +
Sbjct: 1912 TEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMVQGKKRLRGELDIAKEEKALNLEMKRLA 1971
Query: 1543 TVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLD 1602
E++ + K+ KG+ ET + +++ + + K S
Sbjct: 1972 E-----EKMRLVEGKETLSKGETPETSRQRKMTQVEQELFERKLSL-------------- 2012
Query: 1603 EIGEEEDAAAHLAQALVTVDEVIDEEELNMEE----MVKNSNSLFTLD-ELIDQDDCISH 1657
EE H + L + I + +L V+ L +LI + + +S
Sbjct: 2013 ----EEKILLHEDRILAMEESEIAKGKLEFTRGQRIFVQGQRKLAKASRKLIKKRESLSK 2068
Query: 1658 SEPKDVTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRD 1717
K +L Q L + ER +T +EI + + + + L+ + ++ D
Sbjct: 2069 EPAKLNKILKAL--QKLTRDERKLTQEEIKMTK---MKRALFVKERRLSIEQSKLDIKEW 2123
Query: 1718 SIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTV 1777
S++ +D L + + +++TEE+ + L + + V +
Sbjct: 2124 DFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEE-------SKLARKHSEVIL 2176
Query: 1778 DEVGEEEDGDNDLKVE--LAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVM 1835
D+ EEE G + +V L + K+G++ K ++ ++ES E+++
Sbjct: 2177 DD--EEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLL 2234
Query: 1836 EEDLKTMIERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEP 1895
+E +E+ + + + R + E+ V E EE + E EE ++ E
Sbjct: 2235 DE-----LEKQESLSSEEEEEREEEEEREEEEVREE----EEERKEEEEGEEKQVEKEEE 2285
Query: 1896 ERKRKKTEDSSSGKSVASDVPEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQN 1955
E+K+KK E +V EE + ++ + + S E+ C S + +
Sbjct: 2286 EKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEE------TESLSDEEEEEESC-SLEEEVD 2338
Query: 1956 TEKFMAKQRKEKEQNEAEERSSR 1978
EK + K+ K+ + E +S R
Sbjct: 2339 REKEILKKEKQFKLQEQRRKSLR 2361
Score = 34.3 bits (77), Expect = 1.2
Identities = 59/302 (19%), Positives = 128/302 (42%), Gaps = 51/302 (16%)
Query: 1142 QQEEPCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALN 1201
++E+ EEE++ A S+ ++ + E G E +E IP + + + A+
Sbjct: 2156 KEEKMTEEESKLARKHSEVILD--DEEEGGIEEEEVIPFLKRRW----RKRKEAKRGDKP 2209
Query: 1202 QQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEA 1261
++ F+S +++ + S+ F+EE ++ +L+E E ++ +S + E
Sbjct: 2210 KEKFSSQVDE------------VESEEHFSEE--MESLLDEL--EKQESLSSEEEEEREE 2253
Query: 1262 VAEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKETR 1321
E E+ E E +E+ +++ EK+ +E+E+K+ ++ +
Sbjct: 2254 EEEREEEEVREE-----------------EEERKEEEEGEEKQVEKEEEEKKKKKKEKKK 2296
Query: 1322 MDLQIGTEKAEKNEGRMDAEKVEKMAAMKEK----------PAENTLFKAYPNKGVGQAN 1371
++Q E E+ E M E+ E ++ +E+ E + K + +
Sbjct: 2297 EEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQR 2356
Query: 1372 KPDETSKTSILAV-SDVSSSK-PSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAE 1429
+ + +L++ V K +I+ ++ SP K + E ++ P VP QI+ E
Sbjct: 2357 RKSLRGRERVLSILRGVPHGKGRAIRLGVLKSPLKKLMSTALEMKEKTPVPVPEKQISWE 2416
Query: 1430 KK 1431
K
Sbjct: 2417 DK 2418
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 51.6 bits (122), Expect = 8e-06
Identities = 88/435 (20%), Positives = 178/435 (40%), Gaps = 44/435 (10%)
Query: 1108 IDESEVQTATDSPSVKPNEL--EEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAVETL 1165
I++ E + S K +++ EE + + Q+EE EE + +
Sbjct: 278 INKMEARPRRQSMKEKEHQVVRNEEQKAEQEEGKVAQREEELEETGNQHN--------DV 329
Query: 1166 ELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTALLP 1225
E+E GEE ++EI +V S + ++ E +E + + E + + P+ +
Sbjct: 330 EIEEAGEEEEKEIAIVHSDAEKEQEEEEQKQEMEVKMEEETEVRESEKQQDSQPEEVM-- 387
Query: 1226 SDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVTLVP 1285
V N+K ++ + + + + + EA E+E E EI P +L P
Sbjct: 388 --DVLEMVENVKHVIADQEVMETNRVESVEPSENEASKELEP-EMEFEIEPDKECKSLSP 444
Query: 1286 GIPTGDEKTVDKKNISEKKGNMD-EKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAEKVE 1344
G K+N+S +D EKE +E KE+ + + +++ ++ +
Sbjct: 445 G----------KENVSA----LDMEKESEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQS 490
Query: 1345 KMAAMKEKPAEN---TLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSS 1401
+ + P++ +L P V Q + + V V ++ ++ V+
Sbjct: 491 QPVLQSQPPSQPEDLSLAVLQPTPQVTQ-EQGHLLPERKDFPVESVKLTEVPVEPVLTVH 549
Query: 1402 PKAKA---TVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKP 1458
P++K+ T S++ + S R + ++ S+ +S+ SG SSS+
Sbjct: 550 PESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSG--SSSSRSSS 607
Query: 1459 TQSSLTRGGSGRISALQGKLSKLDYRDITK---QSQETEARPSI-MKRDDSNNKTLAEQN 1514
+ SS T G S R S+ S + R ++ +++ + R S+ KR D++ + ++
Sbjct: 608 SSSSSTSGSSSRDSS-SSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKS 666
Query: 1515 TKNPKSTTGRSSKSK 1529
+K S + SK K
Sbjct: 667 SKGGSSRDTKGSKDK 681
Score = 34.7 bits (78), Expect = 0.95
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 471 SRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFI 530
+R R N+T + RS S S S SS+S S S R S S
Sbjct: 558 TRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSS 617
Query: 531 SRYRSRSRSRSPY-RIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGT 589
SR S S S S R R+ RG + R+ RS DRK+ ++RS +
Sbjct: 618 SRDSSSSTSSSSESRSRSRGRGHNR----------DRKHRRSVDRKRRDTSGLERSHKSS 667
Query: 590 EFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSD 629
+ + + + +S + + ++ S + S K +S ++ D
Sbjct: 668 KGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERD 707
Score = 32.3 bits (72), Expect = 4.7
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 1752 DEVTEEDEDSLADFNNLKEEL----NFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKKG 1807
++ E++E +A EE N V ++E GEEE+ + + A+ + + K+
Sbjct: 302 EQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIAIVHSDAEKEQEEEEQKQE 361
Query: 1808 NRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTMIE--RHLTAK---TPTKRV------ 1856
K +T+ + E P E VM D+ M+E +H+ A T RV
Sbjct: 362 MEVKMEEETEVRESEKQQDSQP--EEVM--DVLEMVENVKHVIADQEVMETNRVESVEPS 417
Query: 1857 --RIGKTLPSEKAVVTEPAK-------GEE---AFQMSEVDEESGLKDSEPE 1896
K L E EP K G+E A M + EE K+SEP+
Sbjct: 418 ENEASKELEPEMEFEIEPDKECKSLSPGKENVSALDMEKESEEKEEKESEPQ 469
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 51.2 bits (121), Expect = 1e-05
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 469 LPS--RRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRIC 526
LPS R +R + +PRRR+HSP RR RS + +R SRSP R RSRSP
Sbjct: 792 LPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPT-AYRVSRSPGASRKRTRSRSP--- 847
Query: 527 HRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSS 572
H + RSRSR++S R ++ R +P S S S
Sbjct: 848 HEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVS 893
Score = 47.4 bits (111), Expect = 1e-04
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 18/213 (8%)
Query: 466 PEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMH------------ 513
P+ S+ + R+E + +++ H R RS H +SRS H
Sbjct: 738 PDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYR 797
Query: 514 --YMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSP-ERMSRRSVR 570
R RSRSPR R R + YR+ S K RS SP E+ +R R
Sbjct: 798 TVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSR 857
Query: 571 SSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDS 630
S + KA V S + AA HS + P S G+ + + ++
Sbjct: 858 SRTKSKARSQSVSPSKQAA---PRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEA 914
Query: 631 NLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQ 663
+ + + D +++ + + + +LQ
Sbjct: 915 QISSAIVSSVQSKITQDLMAKVRAMLAASKNLQ 947
Score = 37.4 bits (85), Expect = 0.15
Identities = 86/401 (21%), Positives = 150/401 (37%), Gaps = 41/401 (10%)
Query: 1087 EVQIEHDPELEKESPGLKNSPIDESEV---------QTATDSPSVKPNELEEESTPSIQT 1137
E + PE ++ G +P D +EV + A+ S +V +L + S I
Sbjct: 523 EAPTDSAPEKPSDA-GEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASFAPISF 581
Query: 1138 ETLVQQEE--PCEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENA 1195
++ + P E+ K DSD E+ E + P VA V +E+
Sbjct: 582 AIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQL 641
Query: 1196 EECALNQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGIT 1255
+ L + LE + A K A +S +E+ L+ E +A F+ +
Sbjct: 642 TQEELEAKQAKQKLEDRLAAAAREKLAQASKES---KEKQLQA---ERKRKAALFLQTLK 695
Query: 1256 QTMVEAVAEVEKNETVSEILPSTCIVTLVPG---IPTGDEKTVDKKNISEKKGNMDEKEE 1312
+ EA A + S ST L+ G +PT + K D+ + K +E++E
Sbjct: 696 NPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKE 755
Query: 1313 KEFNTKETRMDLQIGTEK---AEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQ 1369
K+ + R + + K + K+ R ++ + + + P + +
Sbjct: 756 KKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRR---R 812
Query: 1370 ANKPDETSKTSILAVSDVSSSKP--SIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQIN 1427
A+ P+ + + + S P S K SP K K +S KS R Q
Sbjct: 813 AHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEK---KKKRRSRSRTKSKARSQSV 869
Query: 1428 AEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGS 1468
+ K +A +P + + A S+S P +S RG S
Sbjct: 870 SPSKQAAP-----RPAAPAAHSAHSAS-VSPVES---RGSS 901
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 51.2 bits (121), Expect = 1e-05
Identities = 111/597 (18%), Positives = 232/597 (38%), Gaps = 81/597 (13%)
Query: 1431 KLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQS 1490
KL K LLK +A +F+ T+ L + + K +L+ + +T
Sbjct: 834 KLFFKIKPLLKSAETEKEMATMKEEFQKTKDELAKS--------EAKRKELEEKMVTLLK 885
Query: 1491 QETEARPSIMKRDDS--NNKTLAEQNTKNPKSTTGR----SSKSKEEPLFPFNL------ 1538
++ + + + DS + + EQ KN + + +++EE L
Sbjct: 886 EKNDLQLQVQSEADSLADAEERCEQLIKNKIQLEAKIKEVTERAEEEEEINAELTAKKRK 945
Query: 1539 --DEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGEL 1596
DE + + I+++ + AK K + +KN+ L + K S + E
Sbjct: 946 LEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLSKEKKALQET 1005
Query: 1597 SFVTLDEIGEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCIS 1656
TLD++ EED L +A +++ +D+ E ++E+ K L ++ D ++
Sbjct: 1006 HQQTLDDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLA 1065
Query: 1657 HSEPKDVTVLSVAEEQDLLKQE----RLVTVDEIGEVEELPLNESADITFATLNTKGNEG 1712
D+ ++ L K+E L++ E + E+ L + A + G E
Sbjct: 1066 QESTMDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEI 1125
Query: 1713 DTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEEL 1772
+ R S Q + L + E +++ E ++ A+F L+ +L
Sbjct: 1126 EAERASRAKAEKQRSDLSRELEEISERLEEAGG----ATSAQVELNKKREAEFQKLRRDL 1181
Query: 1773 NFVTVD-----------------EVGEEEDGDNDLKVELAQSKNDHPTDKKG-NRKKRAV 1814
T+ E+GE+ D +K +L + K++ + + A+
Sbjct: 1182 EEATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKMETDDLSSNAEAI 1241
Query: 1815 DTKKTKLESL--SQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIG---KTLPSEKAVV 1869
K LE + S V+E +E+ + + LTA+ + G + L + A+V
Sbjct: 1242 SKAKGNLEKMCRSLEDQVSELKTKEEEQQRLINDLTAQRARLQTEAGEYSRQLDEKDALV 1301
Query: 1870 TEPAKGEEAFQMS------EVDEESGLKDS----------EPERKRKKTEDSSSGKSVAS 1913
++ ++ ++A +++EE+ K++ + + R++ E+ GK+
Sbjct: 1302 SQLSRSKQASTQQIEELKHQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKA--- 1358
Query: 1914 DVPEELDFLVPKAGFFCPICSLFYSGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQN 1970
EL + KA + K T+ + T + +K +A++ +E E++
Sbjct: 1359 ----ELQRALSKAN-----SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEH 1406
>gi|109637771 calpastatin isoform l [Homo sapiens]
Length = 654
Score = 50.8 bits (120), Expect = 1e-05
Identities = 125/605 (20%), Positives = 237/605 (39%), Gaps = 55/605 (9%)
Query: 1353 PAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTE 1412
P E K P K Q+ KP K + S+ + +K ++ P K+T
Sbjct: 3 PTETKAVKTEPEKK-SQSTKPKSLPKQASDTGSNDAHNKKAVSRSAEQQPSEKSTE---- 57
Query: 1413 NQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTR--GGSGR 1470
PK+ P+D I+A + A + + +S + P +S + G SG
Sbjct: 58 -----PKTKPQDMISAGGESVAGITAISGKPGDKKKEKKSLTPAVPVESKPDKPSGKSGM 112
Query: 1471 ISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKE 1530
+AL + L + T++ T P + D + T E+ K + + +
Sbjct: 113 DAALDDLIDTLGGPEETEEENTTYTGPEV---SDPMSSTYIEELGKREVTIPPKYRELLA 169
Query: 1531 EPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPR 1590
+P+ P + + ++ D +P+ A + K + E LK S ++ R
Sbjct: 170 KPIGPDDAIDALSSDFTCG--SPTAAGKKTEKEESTEVLK--AQSAGTVRSAAPPQEKKR 225
Query: 1591 GVEGELSFVTLDEIGEEEDAAAHLAQALVTVD----EVIDEEELNMEEMVKNSNSLFTLD 1646
VE + D+ E A+ QA +D + +DE + E++ K D
Sbjct: 226 KVEKD---TMSDQALEALSASLGTRQAEPELDLRSIKEVDEAKAKEEKLEKCGED----D 278
Query: 1647 ELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEI------GEVEELPL--NESA 1698
E I + + + KD L E+ + +DE+ E +E P E
Sbjct: 279 ETIPSEYRLKPATDKDGKPLLPEPEEKPKPRSESELIDELSEDFDRSECKEKPSKPTEKT 338
Query: 1699 DITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDLHLVTLDEVTEED 1758
+ + A +E R S+ I S PE P+TL + DD+ + +L + +
Sbjct: 339 EESKAAAPAPVSEA-VCRTSMCSIQSAPPE-PATL--KGTVPDDAVEALADSLGKKEADP 394
Query: 1759 EDSLADFNNLKEELNFVTVDEVGEEEDG-DNDLKVELAQSKNDHPTDKKGNRKKRAVDTK 1817
ED + +KE+ +++GE+E+ D ++E + K+ P K ++++ ++
Sbjct: 395 EDGKPVMDKVKEKAKEEDREKLGEKEETIPPDYRLEEVKDKDGKPLLPKESKEQLPPMSE 454
Query: 1818 KTKLESLSQ--VGPVNENVME-EDLKTMIE-RHLTAKTPTKRVRIG----KTLPSEKAVV 1869
L++LS+ GP N + ++ ED K + ++TP + G T S+K +
Sbjct: 455 DFLLDALSEDFSGPQNASSLKFEDAKLAAAISEVVSQTPASTTQAGAPPRDTSQSDKDLD 514
Query: 1870 TEPAKGEEAF--QMSEVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEELDFLVPKAG 1927
K ++ + + DE ++D E+ + + D + +P E L+ G
Sbjct: 515 DALDKLSDSLGQRQPDPDENKPMEDKVKEKAKAEHRDKLGERD--DTIPPEYRHLLDDNG 572
Query: 1928 FFCPI 1932
P+
Sbjct: 573 QDKPV 577
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 50.8 bits (120), Expect = 1e-05
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 23/196 (11%)
Query: 479 KENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSR 538
K NE RS S + +SR SS SH RR RS + R +RS SR + R R
Sbjct: 299 KSNERKGGRSRSHTRSKSRSSSKSHS-RRKRSQSKHRSRSHNRSR-------SRQKDRRR 350
Query: 539 SRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLE 598
S+SP++ R+ R R SR S D++K + ++ E +++K E
Sbjct: 351 SKSPHKKRSKSR----------ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERE 400
Query: 599 AADKGHSPAQKPKTSSGTKPSVKPTSATKS-----DSNLGGHSIRCKSKNLEDDTLSECK 653
+ ++ K K K K + R K K E D E +
Sbjct: 401 REKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKERE 460
Query: 654 QVSDKAVSLQRKLRKE 669
+ K + +RK K+
Sbjct: 461 KDRSKEIDEKRKKDKK 476
Score = 38.9 bits (89), Expect = 0.050
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 443 QHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSS 502
+ + H + + +++ D E R E + K + + R+ S SRRS SS
Sbjct: 434 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSS 493
Query: 503 HRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPE 562
R RR R R SRSPR S+ R SRSP SP+ +
Sbjct: 494 SRERRRRRS-----RSSSRSPR-----TSKTIKRKSSRSP---------SPRSRNKKDKK 534
Query: 563 RMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKP 622
R R S R++ +++S + + ++ + K SS +K V
Sbjct: 535 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSK-EVDD 593
Query: 623 TSATKSDSNLGGHSIRCKSKNLEDDTLS 650
A +++ N H+ C+ L ++ LS
Sbjct: 594 KDAPRTEENKIQHNGNCQ---LNEENLS 618
Score = 35.4 bits (80), Expect = 0.56
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 1292 EKTVDKKNISEKKGNMDEKEEKE-----------FNTKETRMDLQIGTEKAEKNEGRMDA 1340
EK +K+ + EK + + EKE KE D + EK + E +
Sbjct: 382 EKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEH 441
Query: 1341 EKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVS----DVSSSKPSIKA 1396
EK KE+ E K +K + + K D+ S+T + + SSS+ +
Sbjct: 442 EKDRDKEKEKEQDKEKEREKD-RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR 500
Query: 1397 VIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKF 1456
SS ++ T SKT +KS PR + +KK + R ++E +
Sbjct: 501 RSRSSSRSPRT-SKTIKRKSSRSPSPRSRNKKDKKREKE----------RDHISERRERE 549
Query: 1457 KPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARP--SIMKRDDSNNKTLAEQN 1514
+ T S+ + + R GK KL+ + + +E P S+ K D + E+N
Sbjct: 550 RST--SMRKSSNDR----DGK-EKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEEN 602
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 50.8 bits (120), Expect = 1e-05
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 23/196 (11%)
Query: 479 KENETPRRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSR 538
K NE RS S + +SR SS SH RR RS + R +RS SR + R R
Sbjct: 183 KSNERKGGRSRSHTRSKSRSSSKSHS-RRKRSQSKHRSRSHNRSR-------SRQKDRRR 234
Query: 539 SRSPYRIRNPFRGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLE 598
S+SP++ R+ R R SR S D++K + ++ E +++K E
Sbjct: 235 SKSPHKKRSKSR----------ERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERE 284
Query: 599 AADKGHSPAQKPKTSSGTKPSVKPTSATKS-----DSNLGGHSIRCKSKNLEDDTLSECK 653
+ ++ K K K K + R K K E D E +
Sbjct: 285 REKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKERE 344
Query: 654 QVSDKAVSLQRKLRKE 669
+ K + +RK K+
Sbjct: 345 KDRSKEIDEKRKKDKK 360
Score = 38.9 bits (89), Expect = 0.050
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 443 QHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSS 502
+ + H + + +++ D E R E + K + + R+ S SRRS SS
Sbjct: 318 EREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSS 377
Query: 503 HRFRRSRSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPE 562
R RR R R SRSPR S+ R SRSP SP+ +
Sbjct: 378 SRERRRRRS-----RSSSRSPR-----TSKTIKRKSSRSP---------SPRSRNKKDKK 418
Query: 563 RMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKP 622
R R S R++ +++S + + ++ + K SS +K V
Sbjct: 419 REKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSK-EVDD 477
Query: 623 TSATKSDSNLGGHSIRCKSKNLEDDTLS 650
A +++ N H+ C+ L ++ LS
Sbjct: 478 KDAPRTEENKIQHNGNCQ---LNEENLS 502
Score = 35.4 bits (80), Expect = 0.56
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 1292 EKTVDKKNISEKKGNMDEKEEKE-----------FNTKETRMDLQIGTEKAEKNEGRMDA 1340
EK +K+ + EK + + EKE KE D + EK + E +
Sbjct: 266 EKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEH 325
Query: 1341 EKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVS----DVSSSKPSIKA 1396
EK KE+ E K +K + + K D+ S+T + + SSS+ +
Sbjct: 326 EKDRDKEKEKEQDKEKEREKD-RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR 384
Query: 1397 VIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLLKPTSARSGLAESSSKF 1456
SS ++ T SKT +KS PR + +KK + R ++E +
Sbjct: 385 RSRSSSRSPRT-SKTIKRKSSRSPSPRSRNKKDKKREKE----------RDHISERRERE 433
Query: 1457 KPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARP--SIMKRDDSNNKTLAEQN 1514
+ T S+ + + R GK KL+ + + +E P S+ K D + E+N
Sbjct: 434 RST--SMRKSSNDR----DGK-EKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEEN 486
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 50.4 bits (119), Expect = 2e-05
Identities = 128/592 (21%), Positives = 218/592 (36%), Gaps = 53/592 (8%)
Query: 1094 PELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEK 1153
PE + P + +SE + S K + EE T Q V +EE E+EA++
Sbjct: 423 PEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEE--EKEAKE 480
Query: 1154 ATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLE--K 1211
+ E E E GEE + P +AS E + EE + + + E K
Sbjct: 481 EEGKEEEGGEEEEAEG-GEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAK 539
Query: 1212 KGAEIINPKTALLPS--------DSVFAEERNLKGILE-ESPSEAEDFISGITQTMVEAV 1262
AE+ +P+ A P+ ++ E+ K E +SP +A+ ++ EA
Sbjct: 540 SPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK 599
Query: 1263 AEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEF--NTKET 1320
+ + V E S P +E + S +K KEE + K
Sbjct: 600 SPEKAKSPVKEEAKSPAEAKS----PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSP 655
Query: 1321 RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTS 1380
+ EKA K+ + +A+ EK + + A++ P K +A P++
Sbjct: 656 EKEEAKSPEKA-KSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKE--EAKSPEKAKSPV 712
Query: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKT----ENQKSFPKSVPRDQINAEKKLSAKE 1436
+K +K + KAK+ V + E KS K+ D + E K AKE
Sbjct: 713 KEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKE 772
Query: 1437 FGLLK----PTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQE 1492
P A+S + E + +S L A + ++ K ++ K +
Sbjct: 773 EARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAK----APEKEIPK---KEEVKSPVK 825
Query: 1493 TEARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVN 1552
E +P +K + K E+ PK+ + SK +E P + +V E+
Sbjct: 826 EEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAP------KKEAPKPKVEEKKE 879
Query: 1553 PS--QAKQNPLKGKRKET--LKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEE 1608
P+ + K++ ++ K++E K VP E K+ K + + + E +
Sbjct: 880 PAVEKPKESKVEAKKEEAEDKKKVPTPE---KEAPAKVEVKEDAKPKEKTEVAKK--EPD 934
Query: 1609 DAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEP 1660
DA A E E++ EE K + +DD EP
Sbjct: 935 DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEP 986
Score = 47.4 bits (111), Expect = 1e-04
Identities = 97/435 (22%), Positives = 167/435 (38%), Gaps = 54/435 (12%)
Query: 1045 KAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSP-KIDLPEVQIEHDPELEKESPGL 1103
K+ + SPE A+S ++P + + SP ++ PE + + + E +SP
Sbjct: 593 KSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPE-KAKSPTKEEAKSPEK 651
Query: 1104 KNSPIDE---------SEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEPCEEEAEKA 1154
SP E S V+ SP + ++ E+ + ++ V++E E+A+
Sbjct: 652 AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK-- 709
Query: 1155 TCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGA 1214
S E E VKEE A +++ ++ E+ ++ D++ A
Sbjct: 710 ---SPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEA 766
Query: 1215 EIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEI 1274
+ + A P+D F E+ K ++E E S + + E+ K E V
Sbjct: 767 KTPAKEEARSPADK-FPEKA--KSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKS- 822
Query: 1275 LPSTCIVTLVPGIPTGDE--------KTVDKKNISEKKGNMDEKEEKEFNTKETRMDLQI 1326
P +E K KK EK + EEK+ + KE +
Sbjct: 823 -------------PVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEA 869
Query: 1327 GTEKAE-KNEGRMDAEKVEKMAAMKEKPAEN----TLFKAYPNK-GVGQANKPDETSKTS 1380
K E K E ++ K K+ A KE+ + T K P K V + KP E ++ +
Sbjct: 870 PKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA 929
Query: 1381 ILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKEFGLL 1440
D + +PS A K +A K + ++ K P ++ E K + L
Sbjct: 930 KKEPDDAKAKEPSKPA-----EKKEAAPEKKDTKEEKAKK-PEEKPKTEAKAKEDDKTLS 983
Query: 1441 K-PTSARSGLAESSS 1454
K P+ ++ AE SS
Sbjct: 984 KEPSKPKAEKAEKSS 998
Score = 45.1 bits (105), Expect = 7e-04
Identities = 95/464 (20%), Positives = 167/464 (35%), Gaps = 42/464 (9%)
Query: 1082 KIDLPEVQIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLV 1141
++ PE E K P K+ +E++ SP + +EE+ + ++
Sbjct: 543 EVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE 602
Query: 1142 QQEEPCEEEAEK-ATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECAL 1200
+ + P +EEA+ A S E K + P A S E+ +E A
Sbjct: 603 KAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAK-SPEKAKSPEKEEAK 661
Query: 1201 NQQMFNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEE---SPSEAEDFISGITQT 1257
+ + S ++ AE +P+ A P + K ++E SP +A+ + ++
Sbjct: 662 SPEKAKSPVK---AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKS 718
Query: 1258 MVEAVAEVEKNETVSEILPSTCIVTLVPGIPTGDE-KTVDKKNISEKKGNMDEK--EEKE 1314
+A + V++ E S P +E K+ +K EK +D K E K
Sbjct: 719 PEKAKSPVKEEAKTPEKAKS----------PVKEEAKSPEKAKSPEKAKTLDVKSPEAKT 768
Query: 1315 FNTKETRMDLQIGTEKAEK--NEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKG-VGQAN 1371
+E R EKA+ E EK + K E + K K V +
Sbjct: 769 PAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEE 828
Query: 1372 KPDETSKTSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKK 1431
KP E V +P KA KA AT E + S + P+ + K
Sbjct: 829 KPQE-----------VKVKEPPKKA---EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKV 874
Query: 1432 LSAKEFGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQ 1491
KE + KP ++ + ++ K + + ++ + K K+
Sbjct: 875 EEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPD 934
Query: 1492 ETEA----RPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEE 1531
+ +A +P+ K K E+ K P+ +K+KE+
Sbjct: 935 DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKED 978
Score = 42.0 bits (97), Expect = 0.006
Identities = 88/455 (19%), Positives = 172/455 (37%), Gaps = 68/455 (14%)
Query: 470 PSRRNEGNRKENETP-RRRSHSPSPRRSRRSSSSHRFRRSRSPMHYMYRPRSRSPRICHR 528
P + + E ++P + + SP+ +S + S ++SP +++SP
Sbjct: 607 PVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSP------EKAKSPE---- 656
Query: 529 FISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMS---RRSVRSSDRKKALEDVVQRS 585
+ ++SP + ++P + K SPE+ + +S ++ K+ +S
Sbjct: 657 -------KEEAKSPEKAKSPVKAEAK-----SPEKAKSPVKAEAKSPEKAKSPVKEEAKS 704
Query: 586 GHGTEFNKQKHLEAADKGHSPA-QKPKTSSGTKPSVKPT--SATKSDSNLGGHSIRCKSK 642
+ ++ ++ +K SP ++ KT K VK S K+ S ++ KS
Sbjct: 705 PEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSP 764
Query: 643 NLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITELPEDGCT--EEDVRKLFQPF 700
+ E + +DK + KE+ + PE + +ED + +
Sbjct: 765 EAKTPAKEEARSPADKFPEKAKSPVKEE----------VKSPEKAKSPLKEDAKAPEKEI 814
Query: 701 GKVNDVLIVPYRKEAYLEMEFKEAIT-AIMKYIETTPLTIKGKSVKICVPGKKKAQNKEV 759
K +V +E E++ KE A + TP T + K K KK+A +V
Sbjct: 815 PKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKV 874
Query: 760 KKKT-----------LESKKVSASTLKRDADASKAVEIVTSTSAAKTGQAKASVAKVNKS 808
++K +E+KK A K+ K + K VAK
Sbjct: 875 EEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPD 934
Query: 809 TGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSNKPVTIPENSEIK 868
K A + +K + K + KK + +K K KP T + E
Sbjct: 935 DAK-----------AKEPSKPAEKKEAAPEKKDTKEEKA----KKPEEKPKTEAKAKEDD 979
Query: 869 TSIEVKATENCAKEAISDAALEATENEPLNKETEE 903
++ + ++ A++A ++ + +++P K TE+
Sbjct: 980 KTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATED 1014
Score = 41.6 bits (96), Expect = 0.008
Identities = 156/775 (20%), Positives = 284/775 (36%), Gaps = 131/775 (16%)
Query: 1162 VETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKG-AEIINPK 1220
V T + + EE+ E + + + +E + +L +Q S+LE + A+I + +
Sbjct: 306 VNTDAMRSAQEEITEYRRQLQARTTELEALKSTKD--SLERQ--RSELEDRHQADIASYQ 361
Query: 1221 TALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAE---VEKNETVSEILPS 1277
A+ D AE RN K + E +D ++ +E A +E E P
Sbjct: 362 EAIQQLD---AELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPI 418
Query: 1278 TCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEF-----NTKETRMDLQIGTEKAE 1332
+L G+P + K SE+K + EK EKE T+ET++ ++ TE+ E
Sbjct: 419 P--FSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEV-TEEEE 475
Query: 1333 KNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSKTSILAVSDVSSSKP 1392
K E + + K E+ +E K+ P + +A P++ +K+ V + + S
Sbjct: 476 K-EAKEEEGKEEEGGEEEEAEGGEEETKSPPAE---EAASPEKEAKSP---VKEEAKSPA 528
Query: 1393 SIKAVIVSSPKAKATVSKTENQKSFPKSV---PRDQINAEKKLSAKEFGLLKPTSARSGL 1449
K+ K+ A V E KS K P + + EK+ + + P A+S
Sbjct: 529 EAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPA 588
Query: 1450 AESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETEARPSIMKRDDSNNKT 1509
E + +S + A +K ++ K E ++ + + +
Sbjct: 589 KEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKA--KSPTKEEA 646
Query: 1510 LAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVNPSQAKQNPLKGKRKETL 1569
+ + K+P+ +S + + P+ E +P +AK +P+K + K
Sbjct: 647 KSPEKAKSPEKEEAKSPEKAKSPV-------------KAEAKSPEKAK-SPVKAEAKSPE 692
Query: 1570 K-NVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDAAAHLAQALVTVDEVID-- 1626
K P E +K K+ +E E A + + + T ++
Sbjct: 693 KAKSPVKEEAKSPEKAKSPVK------------EEAKSPEKAKSPVKEEAKTPEKAKSPV 740
Query: 1627 EEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEI 1686
+EE E K+ TLD + E + K+E D+
Sbjct: 741 KEEAKSPEKAKSPEKAKTLD-------------------VKSPEAKTPAKEEARSPADKF 781
Query: 1687 GEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQVPEDPSTLVTVDEIQDDSSDL 1746
E + P+ E + + +++ ++P+ V E +
Sbjct: 782 PEKAKSPVKEE-------VKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQE-- 832
Query: 1747 HLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEEDGDNDLKVELAQSKNDHPTDKK 1806
V + E ++ E+ A EE D K E A K + P K
Sbjct: 833 --VKVKEPPKKAEEEKAPATPKTEE---------------KKDSKKEEAPKK-EAPKPKV 874
Query: 1807 GNRKKRAVDT-KKTKLESLSQVGPVNENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSE 1865
+K+ AV+ K++K+E+ + ED K K PT K P+
Sbjct: 875 EEKKEPAVEKPKESKVEAKKEEA--------EDKK---------KVPTPE----KEAPA- 912
Query: 1866 KAVVTEPAKGEEAFQMS--EVDEESGLKDSEPERKRKKTEDSSSGKSVASDVPEE 1918
K V E AK +E +++ E D+ + S+P K++ + K + PEE
Sbjct: 913 KVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE 967
Score = 38.9 bits (89), Expect = 0.050
Identities = 120/614 (19%), Positives = 213/614 (34%), Gaps = 91/614 (14%)
Query: 751 KKKAQNKEVKKKT----LESKKVSASTLKRDADASKAVEIVTSTSAAKTGQAKASVAKVN 806
+K+A+ +E K++ E++ T A+ + + E + + ++ A
Sbjct: 475 EKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPE 534
Query: 807 KSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSNKPVTIPENSE 866
K KS + VKS + + ++ + EAK VK+ + K P E
Sbjct: 535 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKS---PAKEE 591
Query: 867 IKTSIEVKATENCAKEAISDAALEATENEPLNKETEEMCVMLVSNLPNKGYSVEEVYDLA 926
K+ E K+ E AK + + A E + KE + + S K + EE
Sbjct: 592 AKSPAEAKSPEK-AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE 650
Query: 927 KPFGGLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQLSISMAPENMNIKDE 986
K K+ K+ ++ K+ E PV + + +P K
Sbjct: 651 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKS-----PVKAEAKSPEKAKSPVKEEAKSP 705
Query: 987 EAIFITLVKE-NDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQFGKVDHHVFISNRNK 1045
E + +E PE + + PE V K
Sbjct: 706 EKAKSPVKEEAKSPEKAKSPVKEEA----KTPEKAKSPV----------------KEEAK 745
Query: 1046 AILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEVQIEHDPELEKESPGLKN 1105
+ + SPE A+++ + + + SP PE + + + E +SP
Sbjct: 746 SPEKAKSPEKAKTLDVKSPEAKTPAKEE----ARSPADKFPE-KAKSPVKEEVKSPEKAK 800
Query: 1106 SPIDESEVQTATDSPS---VKPNELEEESTPSIQTETLVQQEEPCEEEAEKATCDSDFAV 1162
SP+ E + P VK EEE ++ + E P + E EKA
Sbjct: 801 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVK-----EPPKKAEEEKAPA------ 849
Query: 1163 ETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQMFNSDLEKKGAEIINPKTA 1222
T + E + + KEE P + +E+ E A E + S +E K E + K
Sbjct: 850 -TPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVE-----KPKESKVEAKKEEAEDKKKV 903
Query: 1223 LLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAVAEVEKNETVSEILPSTCIVT 1282
P +E+P++ E V+ A+ ++ V++ P
Sbjct: 904 PTPE--------------KEAPAKVE----------VKEDAKPKEKTEVAKKEPDDAKAK 939
Query: 1283 LVPGIPTGDEKTVDKKNIS-EKKGNMDEKEEKEFNTKETRMDLQIGTEKAEKNEGRMDAE 1341
K +KK + EKK +EK +K +T + + K + AE
Sbjct: 940 -------EPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAE 992
Query: 1342 KVEKMAAMKEKPAE 1355
K EK ++ +K ++
Sbjct: 993 KAEKSSSTDQKDSK 1006
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,679,144
Number of Sequences: 37866
Number of extensions: 3751870
Number of successful extensions: 21031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 631
Number of HSP's that attempted gapping in prelim test: 16185
Number of HSP's gapped (non-prelim): 4065
length of query: 1978
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1861
effective length of database: 13,817,196
effective search space: 25713801756
effective search space used: 25713801756
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.