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Search of human proteins with 21493041
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21493041 A-kinase anchor protein 3 [Homo sapiens]
(853 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21493041 A-kinase anchor protein 3 [Homo sapiens] 1706 0.0
gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens] 362 e-100
gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens] 362 e-100
gi|217416354 sphingosine kinase type 1-interacting protein isofo... 63 1e-09
gi|217416352 sphingosine kinase type 1-interacting protein isofo... 63 1e-09
gi|7706457 A-kinase anchor protein 11 [Homo sapiens] 54 8e-07
gi|88758580 cyclin L2 isoform A [Homo sapiens] 36 0.13
gi|31563503 activity-dependent neuroprotector [Homo sapiens] 35 0.39
gi|12229217 activity-dependent neuroprotector [Homo sapiens] 35 0.39
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... 33 1.1
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 33 1.1
gi|119433677 chloride channel 1, skeletal muscle [Homo sapiens] 33 1.5
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 33 1.5
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 33 1.5
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 33 1.5
gi|148612857 sickle tail isoform 3 [Homo sapiens] 33 1.5
gi|148612813 sickle tail isoform 2 [Homo sapiens] 33 1.5
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 33 1.5
gi|50843820 sickle tail isoform 1 [Homo sapiens] 32 1.9
gi|70610136 poly (ADP-ribose) glycohydrolase [Homo sapiens] 32 1.9
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 32 1.9
gi|148612811 ubiquitin specific protease 43 [Homo sapiens] 32 1.9
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 2.5
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 2.5
gi|5453978 protein kinase, cGMP-dependent, type II [Homo sapiens] 32 3.3
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 32 3.3
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 31 4.3
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 31 4.3
gi|56788366 phosphatidylinositol-binding clathrin assembly prote... 31 5.6
gi|27502421 CD46 antigen, complement regulatory protein isoform ... 31 5.6
>gi|21493041 A-kinase anchor protein 3 [Homo sapiens]
Length = 853
Score = 1706 bits (4418), Expect = 0.0
Identities = 853/853 (100%), Positives = 853/853 (100%)
Query: 1 MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKMDTSTDPVRVLSWLRRDLEKSTAEFQDVR 60
MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKMDTSTDPVRVLSWLRRDLEKSTAEFQDVR
Sbjct: 1 MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKMDTSTDPVRVLSWLRRDLEKSTAEFQDVR 60
Query: 61 FKPGESFGGETSNSGDPHKGFSVDYYNTTTKGTPERLHFEMTHKEIPCQGPRAQLGNGSS 120
FKPGESFGGETSNSGDPHKGFSVDYYNTTTKGTPERLHFEMTHKEIPCQGPRAQLGNGSS
Sbjct: 61 FKPGESFGGETSNSGDPHKGFSVDYYNTTTKGTPERLHFEMTHKEIPCQGPRAQLGNGSS 120
Query: 121 VDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVN 180
VDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVN
Sbjct: 121 VDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVN 180
Query: 181 ETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSF 240
ETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSF
Sbjct: 181 ETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSF 240
Query: 241 FYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEGIMTYANSVVSDMMVSI 300
FYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEGIMTYANSVVSDMMVSI
Sbjct: 241 FYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEGIMTYANSVVSDMMVSI 300
Query: 301 MKTLKIQVKDTTIATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKR 360
MKTLKIQVKDTTIATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKR
Sbjct: 301 MKTLKIQVKDTTIATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKR 360
Query: 361 TVFSHGSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNV 420
TVFSHGSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNV
Sbjct: 361 TVFSHGSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNV 420
Query: 421 NFAMKSETKLREKMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFE 480
NFAMKSETKLREKMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFE
Sbjct: 421 NFAMKSETKLREKMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFE 480
Query: 481 APNTQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHLA 540
APNTQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHLA
Sbjct: 481 APNTQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHLA 540
Query: 541 QGGRRDARSFVEAAGTTNFPANEPPVAPDESCLKSAPIVGDQEQAEKKDLRSVFFNFIRN 600
QGGRRDARSFVEAAGTTNFPANEPPVAPDESCLKSAPIVGDQEQAEKKDLRSVFFNFIRN
Sbjct: 541 QGGRRDARSFVEAAGTTNFPANEPPVAPDESCLKSAPIVGDQEQAEKKDLRSVFFNFIRN 600
Query: 601 LLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRLYEDDETPGALSGLTKMAVSQ 660
LLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRLYEDDETPGALSGLTKMAVSQ
Sbjct: 601 LLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRLYEDDETPGALSGLTKMAVSQ 660
Query: 661 IDGHMSGQMVEHLMNSVMKLCVIIAKSCDASLAELGDDKSGDASRLTSAFPDSLYECLPA 720
IDGHMSGQMVEHLMNSVMKLCVIIAKSCDASLAELGDDKSGDASRLTSAFPDSLYECLPA
Sbjct: 661 IDGHMSGQMVEHLMNSVMKLCVIIAKSCDASLAELGDDKSGDASRLTSAFPDSLYECLPA 720
Query: 721 KGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTVIVSNHNLTDTVQNKQLQAVLQWV 780
KGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTVIVSNHNLTDTVQNKQLQAVLQWV
Sbjct: 721 KGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTVIVSNHNLTDTVQNKQLQAVLQWV 780
Query: 781 AASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNV 840
AASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNV
Sbjct: 781 AASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNV 840
Query: 841 TPLQLLDWLMVNL 853
TPLQLLDWLMVNL
Sbjct: 841 TPLQLLDWLMVNL 853
>gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens]
Length = 845
Score = 362 bits (930), Expect = e-100
Identities = 300/876 (34%), Positives = 432/876 (49%), Gaps = 184/876 (21%)
Query: 36 TDPVRVLSWLRRDLEKSTAEFQDVRFKPGESFGGETSNS-GDPHKGFSVDYYNTTTK--- 91
+DPV VL+WL DL+K FQ + + ++ G+ H+ S + Y+
Sbjct: 96 SDPVSVLNWLLSDLQKYALGFQHALSPSTSTCKHKVGDTEGEYHRASSENCYSVYADQVN 155
Query: 92 -----GTPERLHFEMTHKEI----------PCQGPRAQLGNGS-----SVDEVSFYANRL 131
P+ L EMT + P + P Q S S+D++SFY NRL
Sbjct: 156 IDYLMNRPQNLRLEMTAAKNTNNNQSPSAPPAKPPSTQRAVISPDGECSIDDLSFYVNRL 215
Query: 132 TNLVIAMARKEINEKIDGSENKCVYQSLYM--GNEP--TPTKSLSKIASELVNETVSACS 187
++LVI MA KEI EK++G ++KC++ S+ GN+ +P SKIASE+ E V
Sbjct: 216 SSLVIQMAHKEIKEKLEG-KSKCLHHSICPSPGNKERISPRTPASKIASEMAYEAVEL-- 272
Query: 188 RNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSFFYKEVF- 246
AA + G R G +KSF Y E+
Sbjct: 273 -TAAEMRGTGEESREGG--------------------------------QKSFLYSELSN 299
Query: 247 ESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEGIMTYANSVVSDMMVSIMKTLKI 306
+S++GD + Q +F S+S+G+M YAN V SDMMVS+MKTLK+
Sbjct: 300 KSKSGD--------------KQMSQRESKEFADSISKGLMVYANQVASDMMVSLMKTLKV 345
Query: 307 QVKDTTI-ATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKRTVFSH 365
I A+++LK+VLL+H KE+VSDLIDS ++NLH++TG LMTD+ FVSAVKR +F+
Sbjct: 346 HSSGKPIPASVVLKRVLLRHTKEIVSDLIDSCMKNLHNITGVLMTDSDFVSAVKRNLFNQ 405
Query: 366 GSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMK-GMGDPKNRNVNF-- 422
Q ATDIM+AML++L + + + + + K++S S S+K G DPK RN +
Sbjct: 406 WKQNATDIMEAMLKRLVSALIGE-------EKETKSQSLSYASLKAGSHDPKCRNQSLEF 458
Query: 423 -AMKSETKLRE--KMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAF 479
MK+E K R+ KM S+P + T A+ +GEHI+KEGLT+W++ Q CK
Sbjct: 459 STMKAEMKERDKGKMKSDP-CKSLTSAEKVGEHILKEGLTIWNQKQGNSCK--------- 508
Query: 480 EAPNTQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHL 539
K S+ EK E +DS A+DLIVSAL LIQYHL
Sbjct: 509 ----VATKACSN-----------------KDEKGEKINASTDSLAKDLIVSALKLIQYHL 547
Query: 540 AQGGRRDARSFVEAAGTT---------------NFPANEPPVAPDESCLKSAPIVGDQE- 583
Q + + G+T A V ES P +E
Sbjct: 548 TQQTKGKDTCEEDCPGSTMGYMAQSTQYEKCGGGQSAKALSVKQLESHRAPGPSTCQKEN 607
Query: 584 ---QAEKKDLRSVFFNFIRNLLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRL 640
++K D+ ++ I+ LL+E FK E P + + K C P AS +
Sbjct: 608 QHLDSQKMDMSNIVLMLIQKLLNENPFK---------CEDPCEGENK-CSEPRASKAASM 657
Query: 641 -YEDDETPGALSGLTKMAVSQIDGHMSGQMVEHLMNSVMKLCVIIAKSCD--ASLAELGD 697
D+ ++ + +GQ ++ L+ SVMKLC+I+AK + A+LAEL +
Sbjct: 658 SNRSDKAEEQCQEHQELDCTSGMKQANGQFIDKLVESVMKLCLIMAKYSNDGAALAEL-E 716
Query: 698 DKSGDASRLTSAFPDSLYECLPAKGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTV 757
+++ A++ +GT + IH+ G Q + V
Sbjct: 717 EQAASANKPN------------FRGT-----------RCIHS---GAMPQNYQDSLGHEV 750
Query: 758 IVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSV 817
IV+N T+++Q KQLQAVLQW+AAS+ NVP+LYF GD +G EKL Q+SA A +KG SV
Sbjct: 751 IVNNQCSTNSLQ-KQLQAVLQWIAASQFNVPMLYFMGDKDGQLEKLPQVSAKAAEKGYSV 809
Query: 818 GEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLMVNL 853
G +LQ V+++ KERQ +EAVG V QLLDWL+ NL
Sbjct: 810 GGLLQEVMKFAKERQPDEAVGKVARKQLLDWLLANL 845
Score = 44.3 bits (103), Expect = 5e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 1 MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKM 32
MS+ +DWL+S GVCKVD+Y+P Q QD K+
Sbjct: 1 MSDDIDWLRSHRGVCKVDLYNPEGQQDQDRKV 32
>gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens]
Length = 854
Score = 362 bits (930), Expect = e-100
Identities = 300/876 (34%), Positives = 432/876 (49%), Gaps = 184/876 (21%)
Query: 36 TDPVRVLSWLRRDLEKSTAEFQDVRFKPGESFGGETSNS-GDPHKGFSVDYYNTTTK--- 91
+DPV VL+WL DL+K FQ + + ++ G+ H+ S + Y+
Sbjct: 105 SDPVSVLNWLLSDLQKYALGFQHALSPSTSTCKHKVGDTEGEYHRASSENCYSVYADQVN 164
Query: 92 -----GTPERLHFEMTHKEI----------PCQGPRAQLGNGS-----SVDEVSFYANRL 131
P+ L EMT + P + P Q S S+D++SFY NRL
Sbjct: 165 IDYLMNRPQNLRLEMTAAKNTNNNQSPSAPPAKPPSTQRAVISPDGECSIDDLSFYVNRL 224
Query: 132 TNLVIAMARKEINEKIDGSENKCVYQSLYM--GNEP--TPTKSLSKIASELVNETVSACS 187
++LVI MA KEI EK++G ++KC++ S+ GN+ +P SKIASE+ E V
Sbjct: 225 SSLVIQMAHKEIKEKLEG-KSKCLHHSICPSPGNKERISPRTPASKIASEMAYEAVEL-- 281
Query: 188 RNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSFFYKEVF- 246
AA + G R G +KSF Y E+
Sbjct: 282 -TAAEMRGTGEESREGG--------------------------------QKSFLYSELSN 308
Query: 247 ESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEGIMTYANSVVSDMMVSIMKTLKI 306
+S++GD + Q +F S+S+G+M YAN V SDMMVS+MKTLK+
Sbjct: 309 KSKSGD--------------KQMSQRESKEFADSISKGLMVYANQVASDMMVSLMKTLKV 354
Query: 307 QVKDTTI-ATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKRTVFSH 365
I A+++LK+VLL+H KE+VSDLIDS ++NLH++TG LMTD+ FVSAVKR +F+
Sbjct: 355 HSSGKPIPASVVLKRVLLRHTKEIVSDLIDSCMKNLHNITGVLMTDSDFVSAVKRNLFNQ 414
Query: 366 GSQKATDIMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMK-GMGDPKNRNVNF-- 422
Q ATDIM+AML++L + + + + + K++S S S+K G DPK RN +
Sbjct: 415 WKQNATDIMEAMLKRLVSALIGE-------EKETKSQSLSYASLKAGSHDPKCRNQSLEF 467
Query: 423 -AMKSETKLRE--KMYSEPKSEEETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAF 479
MK+E K R+ KM S+P + T A+ +GEHI+KEGLT+W++ Q CK
Sbjct: 468 STMKAEMKERDKGKMKSDP-CKSLTSAEKVGEHILKEGLTIWNQKQGNSCK--------- 517
Query: 480 EAPNTQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQYHL 539
K S+ EK E +DS A+DLIVSAL LIQYHL
Sbjct: 518 ----VATKACSN-----------------KDEKGEKINASTDSLAKDLIVSALKLIQYHL 556
Query: 540 AQGGRRDARSFVEAAGTT---------------NFPANEPPVAPDESCLKSAPIVGDQE- 583
Q + + G+T A V ES P +E
Sbjct: 557 TQQTKGKDTCEEDCPGSTMGYMAQSTQYEKCGGGQSAKALSVKQLESHRAPGPSTCQKEN 616
Query: 584 ---QAEKKDLRSVFFNFIRNLLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRL 640
++K D+ ++ I+ LL+E FK E P + + K C P AS +
Sbjct: 617 QHLDSQKMDMSNIVLMLIQKLLNENPFK---------CEDPCEGENK-CSEPRASKAASM 666
Query: 641 -YEDDETPGALSGLTKMAVSQIDGHMSGQMVEHLMNSVMKLCVIIAKSCD--ASLAELGD 697
D+ ++ + +GQ ++ L+ SVMKLC+I+AK + A+LAEL +
Sbjct: 667 SNRSDKAEEQCQEHQELDCTSGMKQANGQFIDKLVESVMKLCLIMAKYSNDGAALAEL-E 725
Query: 698 DKSGDASRLTSAFPDSLYECLPAKGTGSAEAVLQNAYQAIHNEMRGTSGQPPEGCAAPTV 757
+++ A++ +GT + IH+ G Q + V
Sbjct: 726 EQAASANKPN------------FRGT-----------RCIHS---GAMPQNYQDSLGHEV 759
Query: 758 IVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSV 817
IV+N T+++Q KQLQAVLQW+AAS+ NVP+LYF GD +G EKL Q+SA A +KG SV
Sbjct: 760 IVNNQCSTNSLQ-KQLQAVLQWIAASQFNVPMLYFMGDKDGQLEKLPQVSAKAAEKGYSV 818
Query: 818 GEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLMVNL 853
G +LQ V+++ KERQ +EAVG V QLLDWL+ NL
Sbjct: 819 GGLLQEVMKFAKERQPDEAVGKVARKQLLDWLLANL 854
Score = 44.3 bits (103), Expect = 5e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 1 MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKM 32
MS+ +DWL+S GVCKVD+Y+P Q QD K+
Sbjct: 10 MSDDIDWLRSHRGVCKVDLYNPEGQQDQDRKV 41
>gi|217416354 sphingosine kinase type 1-interacting protein isoform 1
[Homo sapiens]
Length = 1700
Score = 62.8 bits (151), Expect = 1e-09
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 748 PPEGCAAP--TVIVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQ 805
PP G A+P +++V N +L + +L+A LQW+AASEL +P +YF E EK L
Sbjct: 1597 PPTGTASPQRSLLVINFDLEPECPDAELRATLQWIAASELGIPTIYFKKSQENRIEKFLD 1656
Query: 806 LSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLM 850
+ K VG++ +V++Y K + + G L L DWL+
Sbjct: 1657 VVQLVHRKSWKVGDIFHAVVQYCKMHE-EQKDGR---LSLFDWLL 1697
>gi|217416352 sphingosine kinase type 1-interacting protein isoform 2
[Homo sapiens]
Length = 1671
Score = 62.8 bits (151), Expect = 1e-09
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 748 PPEGCAAP--TVIVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQ 805
PP G A+P +++V N +L + +L+A LQW+AASEL +P +YF E EK L
Sbjct: 1568 PPTGTASPQRSLLVINFDLEPECPDAELRATLQWIAASELGIPTIYFKKSQENRIEKFLD 1627
Query: 806 LSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLM 850
+ K VG++ +V++Y K + + G L L DWL+
Sbjct: 1628 VVQLVHRKSWKVGDIFHAVVQYCKMHE-EQKDGR---LSLFDWLL 1668
>gi|7706457 A-kinase anchor protein 11 [Homo sapiens]
Length = 1901
Score = 53.5 bits (127), Expect = 8e-07
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 756 TVIVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGC 815
T++++N ++ + QL+ +LQW+ ASE V LYF + ++ + LS +KG
Sbjct: 1809 TLLITNIDMEPCTVDPQLRIILQWLIASEAEVAELYF---HDSANKEFMLLSKQLQEKGW 1865
Query: 816 SVGEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLMVN 852
VG++LQ+VL+Y + + +A L DWL+ N
Sbjct: 1866 KVGDLLQAVLQYYE--VMEKASSEERCKSLFDWLLEN 1900
>gi|88758580 cyclin L2 isoform A [Homo sapiens]
Length = 520
Score = 36.2 bits (82), Expect = 0.13
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 22/173 (12%)
Query: 109 QGPRAQLGNGSSVDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLYMGNEPTPT 168
+ P+ G+ S V RL A A +N G E++ +S +P+
Sbjct: 337 ESPKEGKGSKPSPLSVKNTKRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQSYSRSPS 396
Query: 169 KSLSKIASELVNETVSACSRNA-------------APDKAPGSGDRVSGSSQS------- 208
+S S + + + S S++ AP AP G + GS +S
Sbjct: 397 RSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKGSEIRGSRKSKDCKYPQ 456
Query: 209 -PPNLKYKSTLKIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRF 260
P + +S+ + + ++ER K KKS +Y++ R+ Y R G R+
Sbjct: 457 KPHKSRSRSSSRSRSRSRERADNPGKY-KKKSHYYRDQRRERSRSYERTGRRY 508
>gi|31563503 activity-dependent neuroprotector [Homo sapiens]
Length = 1102
Score = 34.7 bits (78), Expect = 0.39
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 135 VIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVNETVSACSRNAAPDK 194
VI E EK+D E+ Y+++++ EPT + SE+ + V A+P +
Sbjct: 915 VIPEDASESEEKLDQKEDGSKYETIHLTEEPTKLMH-NASDSEVDQDDVVEWKDGASPSE 973
Query: 195 APGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSFFY---KEVFESRNG 251
+ +VS + + K ES++ KP +KK +E + +N
Sbjct: 974 SGPGSQQVSDFEDN--TCEMKPGTWSDESSQSEDARSSKPAAKKKATMQGDREQLKWKNS 1031
Query: 252 DYAREGGRFFPRERKRFRGQERPDD 276
Y + G F+ +++ +++ D+
Sbjct: 1032 SYGKVEG-FWSKDQSQWKNASENDE 1055
>gi|12229217 activity-dependent neuroprotector [Homo sapiens]
Length = 1102
Score = 34.7 bits (78), Expect = 0.39
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 135 VIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELVNETVSACSRNAAPDK 194
VI E EK+D E+ Y+++++ EPT + SE+ + V A+P +
Sbjct: 915 VIPEDASESEEKLDQKEDGSKYETIHLTEEPTKLMH-NASDSEVDQDDVVEWKDGASPSE 973
Query: 195 APGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKSFFY---KEVFESRNG 251
+ +VS + + K ES++ KP +KK +E + +N
Sbjct: 974 SGPGSQQVSDFEDN--TCEMKPGTWSDESSQSEDARSSKPAAKKKATMQGDREQLKWKNS 1031
Query: 252 DYAREGGRFFPRERKRFRGQERPDD 276
Y + G F+ +++ +++ D+
Sbjct: 1032 SYGKVEG-FWSKDQSQWKNASENDE 1055
>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
sapiens]
Length = 1632
Score = 33.1 bits (74), Expect = 1.1
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 141 KEINEKID-GSENKCVYQSLYMGNEPTPTKSLSKIASELVNETVSACSRNAAPDKAPGSG 199
+E+N +++ G++ + + + M + +P K LSK + +++ R+ P P S
Sbjct: 101 REVNGRLENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKRSRDP---PASA 157
Query: 200 DRVSGSSQSP---PNLKYKSTLKIKESTKERQGPDDKPPSKKSFFYK--EVFESRNGDYA 254
+V+G P P + KST + ++ +GP + P ++S K E + + D
Sbjct: 158 SQVTGIRAEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQD 217
Query: 255 REGGRFFPRER 265
+ R RER
Sbjct: 218 EKRRRVTSRER 228
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 33.1 bits (74), Expect = 1.1
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Query: 100 EMTHKEIPCQGPRAQLGNGSSVDEVSFYANRLTN-LVIAMARKEINEKIDGSENKCVYQS 158
E H C G R L S E+ N L++ + E N ++ K +S
Sbjct: 28 EFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIGETN--VERKAKKKRSKS 85
Query: 159 LYMGNEPTPTKSLSKIASELVNETVSACSRNAAPDKAPGSGDRVSGS--SQSPPNLKYKS 216
+ + + S S +SE + S+ S ++ D++ S + S S S + S
Sbjct: 86 VTSSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDS 145
Query: 217 TLKIKESTKERQGPDDKPPSKK 238
+ ST DD+PP KK
Sbjct: 146 SSSSSSSTSTDSSSDDEPPKKK 167
>gi|119433677 chloride channel 1, skeletal muscle [Homo sapiens]
Length = 988
Score = 32.7 bits (73), Expect = 1.5
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 370 ATDIMDAMLRKLYN-VMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNVNFAMKSET 428
A + ++ LY+ ++ KK+P ++ Y++ + D R+V F S T
Sbjct: 566 ANMVAQSLQPSLYDSIIQVKKLPYLPDLGWNQLSKYTIF----VEDIMVRDVKFVSASYT 621
Query: 429 KLREKMYSEPKSE-EETCAKTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFE----APN 483
Y E ++ + T KTL K+ + L ++ E ++L +H E A
Sbjct: 622 ------YGELRTLLQTTTVKTLPLVDSKDSMILLGSVERSELQALLQRHLCPERRLRAAQ 675
Query: 484 TQRKPASDISFEYPEDIGNLSLPPYPPEKPENFMYDSDSWAEDL 527
+ S++ ++ + LP PP +PE+F + + EDL
Sbjct: 676 EMARKLSELPYDGKARLAGEGLPGAPPGRPESFAFVDEDEDEDL 719
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 191 APDKAPGSGDRVSGSSQSPPNLK----YKSTLKIKE------STKERQGPDDKPPSKKSF 240
AP KA G G GS P+L+ YK + K KE STK+ DK +K+
Sbjct: 842 APQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDK--NKEHS 899
Query: 241 FYKEVFESRNGDYARE 256
F+ ++ GD+ RE
Sbjct: 900 FFITDSDASGGDFWRE 915
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 191 APDKAPGSGDRVSGSSQSPPNLK----YKSTLKIKE------STKERQGPDDKPPSKKSF 240
AP KA G G GS P+L+ YK + K KE STK+ DK +K+
Sbjct: 842 APQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDK--NKEHS 899
Query: 241 FYKEVFESRNGDYARE 256
F+ ++ GD+ RE
Sbjct: 900 FFITDSDASGGDFWRE 915
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 191 APDKAPGSGDRVSGSSQSPPNLK----YKSTLKIKE------STKERQGPDDKPPSKKSF 240
AP KA G G GS P+L+ YK + K KE STK+ DK +K+
Sbjct: 842 APQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDK--NKEHS 899
Query: 241 FYKEVFESRNGDYARE 256
F+ ++ GD+ RE
Sbjct: 900 FFITDSDASGGDFWRE 915
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 12/107 (11%)
Query: 165 PTPTKSLSKIASELVNETVSACSRNAAPDKAPGS---------GDRVSGSSQSPPNLKYK 215
P+P +K +E E SA + + P S GD++ Q
Sbjct: 1055 PSPQTRATKYPAE---EPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT 1111
Query: 216 STLKIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRFFP 262
S + + S K R G DKP + + NG + GG F P
Sbjct: 1112 SRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP 1158
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 12/107 (11%)
Query: 165 PTPTKSLSKIASELVNETVSACSRNAAPDKAPGS---------GDRVSGSSQSPPNLKYK 215
P+P +K +E E SA + + P S GD++ Q
Sbjct: 1010 PSPQTRATKYPAE---EPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQT 1066
Query: 216 STLKIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRFFP 262
S + + S K R G DKP + + NG + GG F P
Sbjct: 1067 SRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQANGSAKKSGGDFKP 1113
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 32.7 bits (73), Expect = 1.5
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 31/210 (14%)
Query: 319 KKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKRTVFSHGSQKATDIMDAML 378
+KV++K K + ++ SVT + + S VK V ++ATD+
Sbjct: 584 EKVMVKKDKPIKTE-------TKPSVTEKEVPSKEEPSPVKAEV---AEKQATDVKPKAA 633
Query: 379 RKLYNVMFAKKVPEHVRKAQDK-----AESYSLISMKGMGDPKNRNVNFAMKSETKLREK 433
++ K PE ++ ++K A+ +K PK V +K E K EK
Sbjct: 634 KEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEK 693
Query: 434 MYSEPKSEEETCAKTLGEHIIKE---GLTLWHKTQQKECKSLGFQHAAFEAPNTQRKPAS 490
+ + ++ET K + + + KE + K +KE K L P +K ++
Sbjct: 694 KEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKL---------PKDAKKSST 744
Query: 491 DISFEYPEDIGNLSLPPYPPEKPENFMYDS 520
+S E +L P P+K E+ DS
Sbjct: 745 PLS----EAKKPAALKPKVPKKEESVKKDS 770
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 32.3 bits (72), Expect = 1.9
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 120 SVDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLYMGNEPTPTKSLSKIASELV 179
++D + +L N + M+ K + + S V S ++ E +P L +
Sbjct: 1665 TLDSLEQTIKQLENTISEMSPKALVDTSCSSNRDSVASSSHIAQEASPRPLL------VP 1718
Query: 180 NETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDDKPPSKKS 239
+E +A P P + + GSS +P S + + S K R G DKP +
Sbjct: 1719 DEGPTALE---PPTSIPSASRK--GSSGAPQT----SRMPVPMSAKNRPGTLDKPGKQSK 1769
Query: 240 FFYKEVFESRNGDYAREGGRFFP 262
+ NG + GG F P
Sbjct: 1770 LQDPRQYRQANGSAKKSGGDFKP 1792
>gi|70610136 poly (ADP-ribose) glycohydrolase [Homo sapiens]
Length = 976
Score = 32.3 bits (72), Expect = 1.9
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 772 QLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKER 831
+L+A++Q +AA+ ++YF D + + + ++ +VG+V + +LRY E
Sbjct: 880 RLKALIQILAAAAAERDVVYFTFGDSELMRDIYSMHIFLTERKLTVGDVYKLLLRYYNEE 939
Query: 832 QLN 834
N
Sbjct: 940 CRN 942
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 32.3 bits (72), Expect = 1.9
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 313 IATILLKKVLLKHAKEVVSDLIDSFLRNLHSVTGTLMTDTQFVSAVKRTVFSHGSQKATD 372
IAT K++L K K+V + + ++ H T++ + VS+ K ++ ++ D
Sbjct: 2506 IATAPKKEILSKIYKDVSENGVGKVSKDEHFDKVTVLHYSGNVSSPKHAMWMRFTEDRLD 2565
Query: 373 IMDAMLRKLYNVMFAKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNVNFAMKS-ETKLR 431
R +++ +V V++A++K L + K +N ++S E K R
Sbjct: 2566 ------RGREKLIYEDRVDRTVKEAEEK-----LTEVSQFFRDKTEKLNDELQSPEKKAR 2614
Query: 432 EKMYSEPKSEEETCAKTLGEHIIKEGLTL----WHKTQQKECKSLGFQHAAFEAPNTQRK 487
K E S+ T + E ++ L W K +Q GF A +AP+
Sbjct: 2615 PKNGKEYSSQSPTSSSP--EKVLLTELLASNDEWVKARQHGPDGQGFPKAEEKAPSLPSS 2672
Query: 488 PASDISFEYPED 499
P + + ED
Sbjct: 2673 PEKMVLSQQTED 2684
>gi|148612811 ubiquitin specific protease 43 [Homo sapiens]
Length = 1123
Score = 32.3 bits (72), Expect = 1.9
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 39 VRVLSWLRRDLEKSTAEFQDVRFKPGESFGGETSNSGDPHKGFSVDYYNTTTKGTP---- 94
VR L W R + +AEF++ K G F G + + + +D + +G+
Sbjct: 151 VRAL-WTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPV 209
Query: 95 -ERLHFEMTHKEIPCQGPRAQLGNGSSVDEVSFYANRLTNLVIAMARKEIN 144
E+L E T C P AQL G S + F A ++L K+ N
Sbjct: 210 SEKLPPEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSN 260
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 2.5
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 387 AKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNVNFAMKSETKLREKMYSEPKSEEETCA 446
AKK+ + ++K ++K E + I K N +N ET R + K +EE
Sbjct: 411 AKKLEKQLQKDKEKVEEFKSIPAKS-----NNIIN-----ETTTRNNALEKEKEKEEKKL 460
Query: 447 KTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFEA 481
K + + + +E L + + +E + +GF + EA
Sbjct: 461 KEVMDSLKQETQGLQKEKESREKELMGFSKSVNEA 495
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 2.5
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 387 AKKVPEHVRKAQDKAESYSLISMKGMGDPKNRNVNFAMKSETKLREKMYSEPKSEEETCA 446
AKK+ + ++K ++K E + I K N +N ET R + K +EE
Sbjct: 411 AKKLEKQLQKDKEKVEEFKSIPAKS-----NNIIN-----ETTTRNNALEKEKEKEEKKL 460
Query: 447 KTLGEHIIKEGLTLWHKTQQKECKSLGFQHAAFEA 481
K + + + +E L + + +E + +GF + EA
Sbjct: 461 KEVMDSLKQETQGLQKEKESREKELMGFSKSVNEA 495
>gi|5453978 protein kinase, cGMP-dependent, type II [Homo sapiens]
Length = 762
Score = 31.6 bits (70), Expect = 3.3
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 416 KNRNVNFAMKS-------ETKLREKMYSEPKSEEETCA-------KTLGEHIIKEGLTLW 461
KN NV FAMK +TK +E +YSE + EE C+ +T ++ K L
Sbjct: 473 KNENVAFAMKCIRKKHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDN--KYVYMLL 530
Query: 462 HKTQQKECKSLGFQHAAFEAPNTQRKPAS-DISFEYPEDIGNLSLPPYPPEKPENFMYDS 520
E S+ +F+ P ++ A +F+Y +G + Y KPEN + D+
Sbjct: 531 EACLGGELWSILRDRGSFDEPTSKFCVACVTEAFDYLHRLGII----YRDLKPENLILDA 586
Query: 521 DSW 523
+ +
Sbjct: 587 EGY 589
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 31.6 bits (70), Expect = 3.3
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 19/176 (10%)
Query: 480 EAPNTQRKPASDISFEYPED--IGNLSLPPYPPEKPENFMYDSDSWAEDLIVSALLLIQY 537
E P Q P + + P + +GN P PE+ + + S A+ + VSA +
Sbjct: 344 EEPKAQAAPEKEAAAVAPPERGVGNGRAPDVAPEEVDESKKEDFSEADLVDVSAYSGL-- 401
Query: 538 HLAQGGRRDARSFVEAAGTTNFPANEPPVAPDESCLKSAPIVGDQEQAEKKDLRSVFFN- 596
G A S +E + EPP P+ C++ I G E+ + R + F+
Sbjct: 402 -----GEDSAGSALEEDDEDDEEDGEPPYEPESGCVE---IPGLSEEEDPAPSRKIHFST 453
Query: 597 ----FIRNLLSETIFKRDQSPEPKVPEQPVKEDRKLCERPLASSPPRLYEDDETPG 648
+E +R++ +P + ++++ ER L P L +D E G
Sbjct: 454 APIQVFSTYSNEDYDRRNEDVDPMAASAEYELEKRV-ER-LELFPVELEKDSEGLG 507
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 31.2 bits (69), Expect = 4.3
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 188 RNAAPDKAPGSGDRVSGSSQSPPNLKYKSTLKIKESTKERQGPDD--KPPSKKSFFYKEV 245
R +PD+ S + +++S + +E +ER D + PS + + KE
Sbjct: 252 RGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKE- 310
Query: 246 FESRNGDYAREGGRFFPRERKRFRGQERPDDFTASVSEG 284
Y R G R RE+KR R +E D ++ + S G
Sbjct: 311 -------YKRSGSRSPSREKKRARWEEEKDRWSDNQSSG 342
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 31.2 bits (69), Expect = 4.3
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 164 EPTPTK-------SLSKIASELVNETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKS 216
EPTP K S S +S + + S+ S +++ + S S SS SP K
Sbjct: 2597 EPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP 2656
Query: 217 TLKIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDD 276
K ++ ++ P ++ + +SR+ Y+ P ER+R Q P D
Sbjct: 2657 QALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYS-------PVERRRPSPQPSPRD 2709
Query: 277 FTASVSE 283
+S SE
Sbjct: 2710 QQSSSSE 2716
>gi|56788366 phosphatidylinositol-binding clathrin assembly protein
isoform 1 [Homo sapiens]
Length = 652
Score = 30.8 bits (68), Expect = 5.6
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 71 TSNSGDPHKGFSVDYYNTTTKGTPERLHFEMTHKEIPCQGPRAQLGNGSSVDEVSFYANR 130
T +SGD H S D TT+ + T + P A G +VD S + N+
Sbjct: 441 TKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSA----GLNVDFESVFGNK 496
Query: 131 LTNLVI 136
TN+++
Sbjct: 497 STNVIV 502
>gi|27502421 CD46 antigen, complement regulatory protein isoform 13
precursor [Homo sapiens]
Length = 373
Score = 30.8 bits (68), Expect = 5.6
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 483 NTQRKPASDISFEYPEDIGNLS-LPPYPPEKPENFMYDS-DSWAEDLIVSALLLIQYHLA 540
+T + PAS S P +S P YP KPE + DS D W V A+++I +
Sbjct: 290 STTKSPASSASGPRPTYKPPVSNYPGYP--KPEEGILDSLDVW-----VIAVIVIAIDIF 342
Query: 541 QGGRRDARSFVE 552
+GGRR + VE
Sbjct: 343 KGGRRKGKQMVE 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,027,625
Number of Sequences: 37866
Number of extensions: 1583316
Number of successful extensions: 3854
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3804
Number of HSP's gapped (non-prelim): 73
length of query: 853
length of database: 18,247,518
effective HSP length: 111
effective length of query: 742
effective length of database: 14,044,392
effective search space: 10420938864
effective search space used: 10420938864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.