Guide to the Human Genome
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Name: AKAP3 Sequence: fasta or formatted (853aa) NCBI GI: 21493041
Description:

A-kinase anchor protein 3

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         61           3
 C cysteine            1.5         13           1
 D aspartate           6.1         52           2
 E glutamate           7.7         66           3
 F phenylalanine       3.5         30           2
 G glycine             5.9         50           2
 H histidine           1.8         15           1
 I isoleucine          3.5         30           2
 K lysine              7.9         67           2
 L leucine             8.2         70           3
 M methionine          2.9         25           2
 N asparagine          4.3         37           1
 P proline             5.7         49           2
 Q glutamine           4.6         39           2
 R arginine            4.6         39           2
 S serine              9.3         79           2
 T threonine           5.3         45           3
 V valine              6.7         57           2
 W tryptophan          0.8          7           1
 Y tyrosine            2.6         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 3 
AKAP4                 0.200   A-kinase anchor protein 4 isoform 2 
AKAP4                 0.200   A-kinase anchor protein 4 isoform 1 
SPHKAP                0.023   sphingosine kinase type 1-interacting protein isofo...
SPHKAP                0.023   sphingosine kinase type 1-interacting protein isofo...
AKAP11                0.017   A-kinase anchor protein 11 
CCNL2                 0.007   cyclin L2 isoform A 
ADNP                  0.006   activity-dependent neuroprotector 
ADNP                  0.006   activity-dependent neuroprotector 
DNMT1                 0.005   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
ZCCHC10               0.005   zinc finger, CCHC domain containing 10 
CLCN1                 0.005   chloride channel 1, skeletal muscle 
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
KIAA1217              0.005   sickle tail isoform 3 
KIAA1217              0.005   sickle tail isoform 2 
MAP1B                 0.005   microtubule-associated protein 1B 
KIAA1217              0.004   sickle tail isoform 1 
PARG                  0.004   poly (ADP-ribose) glycohydrolase 
ANK3                  0.004   ankyrin 3 isoform 1 
USP43                 0.004   ubiquitin specific protease 43 
SMC4                  0.004   SMC4 structural maintenance of chromosomes 4-like 1 ...
SMC4                  0.004   SMC4 structural maintenance of chromosomes 4-like 1 ...
PRKG2                 0.004   protein kinase, cGMP-dependent, type II 
PPP1R9B               0.004   protein phosphatase 1, regulatory subunit 9B 
RNASEN                0.004   ribonuclease III, nuclear isoform 2 
SRRM2                 0.004   splicing coactivator subunit SRm300 
PICALM                0.004   phosphatidylinositol-binding clathrin assembly prote...
CD46                  0.004   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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